RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 LINC01600Q96MT4 127 aa9.47□□□□□ -0.89
TRAFD1-203ENST00000547063 KIAA1109Q2LD37 5005 aa9.47□□□□□ -0.89
TRAFD1-203ENST00000547063 RYR1P21817 5038 aa9.47□□□□□ -0.89
TRAFD1-203ENST00000547063 KRTAP1-4P0C5Y4 121 aa9.46□□□□□ -0.9
TRAFD1-203ENST00000547063 CRYGAP11844 174 aa9.46□□□□□ -0.9
TRAFD1-203ENST00000547063 KRTAP17-1Q9BYP8 105 aa9.46□□□□□ -0.9
TRAFD1-203ENST00000547063 PRO0461Q9UI25 63 aa9.46□□□□□ -0.9
TRAFD1-203ENST00000547063 MTURNQ8N3F0 131 aa9.45□□□□□ -0.9
TRAFD1-203ENST00000547063 SRRM2Q9UQ35 2752 aaKnown RBP9.45□□□□□ -0.9
TRAFD1-203ENST00000547063 SMIM29Q86T20 159 aa9.44□□□□□ -0.9
TRAFD1-203ENST00000547063 JMJD7-PLA2G4BH0Y9G9 81 aa9.43□□□□□ -0.9
TRAFD1-203ENST00000547063 C3orf22Q8N5N4 141 aa9.43□□□□□ -0.9
TRAFD1-203ENST00000547063 ANAPC11Q9NYG5 84 aa9.43□□□□□ -0.9
TRAFD1-203ENST00000547063 HSPG2P98160 4391 aa9.42□□□□□ -0.9
TRAFD1-203ENST00000547063 VPS13BQ7Z7G8 4022 aa9.41□□□□□ -0.9
TRAFD1-203ENST00000547063 BIRC6Q9NR09 4857 aa9.41□□□□□ -0.9
TRAFD1-203ENST00000547063 IGLV9-49A0A0B4J1Y8 123 aa9.41□□□□□ -0.9
TRAFD1-203ENST00000547063 SMCPP49901 116 aaPredicted RBP9.41□□□□□ -0.9
TRAFD1-203ENST00000547063 IGLV8-61A0A075B6I0 122 aa9.4□□□□□ -0.9
TRAFD1-203ENST00000547063 C9orf153Q5TBE3 101 aa9.4□□□□□ -0.9
TRAFD1-203ENST00000547063 Q6JHZ5 121 aa9.4□□□□□ -0.9
TRAFD1-203ENST00000547063 Q8NBF4 154 aa9.4□□□□□ -0.9
TRAFD1-203ENST00000547063 RBM3P98179 157 aaKnown RBP9.39□□□□□ -0.91
TRAFD1-203ENST00000547063 SSBP3-AS1Q7Z2R9 100 aa9.39□□□□□ -0.91
TRAFD1-203ENST00000547063 A0A087X002 238 aa9.38□□□□□ -0.91
TRAFD1-203ENST00000547063 MOBPQ13875 183 aa9.37□□□□□ -0.91
TRAFD1-203ENST00000547063 C21orf62-AS1Q17RA5 79 aa9.37□□□□□ -0.91
TRAFD1-203ENST00000547063 FAT1Q14517 4588 aa9.36□□□□□ -0.91
TRAFD1-203ENST00000547063 TEN1Q86WV5 123 aa9.36□□□□□ -0.91
TRAFD1-203ENST00000547063 TYMSOSQ8TAI1 123 aa9.36□□□□□ -0.91
TRAFD1-203ENST00000547063 OBSCN-AS1Q96MR7 158 aa9.36□□□□□ -0.91
TRAFD1-203ENST00000547063 DSCR8Q96T75 97 aa9.36□□□□□ -0.91
TRAFD1-203ENST00000547063 PDE6GP18545 87 aa9.35□□□□□ -0.91
TRAFD1-203ENST00000547063 KRTAP13-2Q52LG2 175 aa9.35□□□□□ -0.91
TRAFD1-203ENST00000547063 PRR26Q8N8Z3 221 aa9.35□□□□□ -0.91
TRAFD1-203ENST00000547063 KRTAP4-5Q9BYR2 181 aa9.35□□□□□ -0.91
TRAFD1-203ENST00000547063 OXTP01178 125 aa9.34□□□□□ -0.91
TRAFD1-203ENST00000547063 A0A1B0GV72 72 aa9.33□□□□□ -0.92
TRAFD1-203ENST00000547063 ETDBQ3ZM63 59 aa9.33□□□□□ -0.92
TRAFD1-203ENST00000547063 TRBV7-4A0A0J9YYF1 115 aa9.32□□□□□ -0.92
TRAFD1-203ENST00000547063 LOC110117498A0A087WWA1 95 aa9.31□□□□□ -0.92
TRAFD1-203ENST00000547063 IGFL1Q6UW32 110 aa9.31□□□□□ -0.92
TRAFD1-203ENST00000547063 C14orf132Q9NPU4 83 aa9.3□□□□□ -0.92
TRAFD1-203ENST00000547063 FLG2Q5D862 2391 aaPredicted RBP9.28□□□□□ -0.92
TRAFD1-203ENST00000547063 CD164Q04900 197 aa9.28□□□□□ -0.92
TRAFD1-203ENST00000547063 C4orf48Q5BLP8 95 aa9.28□□□□□ -0.92
TRAFD1-203ENST00000547063 KRTAP10-8P60410 259 aa9.27□□□□□ -0.93
TRAFD1-203ENST00000547063 SPAG11AQ6PDA7 123 aa9.27□□□□□ -0.93
TRAFD1-203ENST00000547063 KRTAP29-1A8MX34 341 aaPredicted RBP9.26□□□□□ -0.93
TRAFD1-203ENST00000547063 CCKP06307 115 aa9.26□□□□□ -0.93
TRAFD1-203ENST00000547063 Q6Q795 121 aa9.26□□□□□ -0.93
TRAFD1-203ENST00000547063 Q6ZQT0 140 aa9.26□□□□□ -0.93
TRAFD1-203ENST00000547063 LINC00304Q8N9R0 145 aa9.25□□□□□ -0.93
TRAFD1-203ENST00000547063 A0A1B0GW54 56 aa9.24□□□□□ -0.93
TRAFD1-203ENST00000547063 VPS25Q9BRG1 176 aa9.23□□□□□ -0.93
TRAFD1-203ENST00000547063 SPINK1P00995 79 aa9.22□□□□□ -0.93
TRAFD1-203ENST00000547063 HERC2O95714 4834 aa9.22□□□□□ -0.93
TRAFD1-203ENST00000547063 A0A0G2JQZ4 141 aa9.21□□□□□ -0.94
TRAFD1-203ENST00000547063 A0A1W2PNM2 257 aa9.21□□□□□ -0.94
TRAFD1-203ENST00000547063 TRBV7-7A0A0K0K1E9 115 aa9.2□□□□□ -0.94
TRAFD1-203ENST00000547063 RPS29P62273 56 aaKnown RBP9.19□□□□□ -0.94
TRAFD1-203ENST00000547063 HRCT1Q6UXD1 115 aa9.19□□□□□ -0.94
TRAFD1-203ENST00000547063 J3QR89 54 aa9.18□□□□□ -0.94
TRAFD1-203ENST00000547063 MT1HL1P0DM35 61 aa9.18□□□□□ -0.94
TRAFD1-203ENST00000547063 LIMD2Q9BT23 127 aa9.18□□□□□ -0.94
TRAFD1-203ENST00000547063 SS18L2Q9UHA2 77 aa9.18□□□□□ -0.94
TRAFD1-203ENST00000547063 PKHD1L1Q86WI1 4243 aa9.18□□□□□ -0.94
TRAFD1-203ENST00000547063 J3QL48 77 aa9.16□□□□□ -0.94
TRAFD1-203ENST00000547063 A0A087WSZ3 146 aa9.15□□□□□ -0.94
TRAFD1-203ENST00000547063 LCE2AQ5TA79 106 aaPredicted RBP9.15□□□□□ -0.94
TRAFD1-203ENST00000547063 Q5XG85 94 aa9.15□□□□□ -0.94
TRAFD1-203ENST00000547063 ACYP1P07311 99 aa9.14□□□□□ -0.95
TRAFD1-203ENST00000547063 FAM240AA0A1B0GVK7 77 aa9.12□□□□□ -0.95
TRAFD1-203ENST00000547063 ASB16-AS1Q495Z4 193 aa9.1□□□□□ -0.95
TRAFD1-203ENST00000547063 K7ERU9 68 aa9.08□□□□□ -0.96
TRAFD1-203ENST00000547063 UBL5Q9BZL1 73 aa9.08□□□□□ -0.96
TRAFD1-203ENST00000547063 NREPQ16612 68 aa9.07□□□□□ -0.96
TRAFD1-203ENST00000547063 DMBT1Q9UGM3 2413 aaPredicted RBP9.06□□□□□ -0.96
TRAFD1-203ENST00000547063 LINC00846Q9NV44 126 aa9.04□□□□□ -0.96
TRAFD1-203ENST00000547063 LRP1Q07954 4544 aaKnown RBP9.04□□□□□ -0.96
TRAFD1-203ENST00000547063 ABCA13Q86UQ4 5058 aa9.02□□□□□ -0.97
TRAFD1-203ENST00000547063 MYCBP2O75592 4640 aa9.02□□□□□ -0.97
TRAFD1-203ENST00000547063 Q6ZVQ6 151 aa9.01□□□□□ -0.97
TRAFD1-203ENST00000547063 J3KT08 172 aa9□□□□□ -0.97
TRAFD1-203ENST00000547063 C1orf195Q5TG92 126 aa9□□□□□ -0.97
TRAFD1-203ENST00000547063 LINC00472Q9H8W2 130 aa9□□□□□ -0.97
TRAFD1-203ENST00000547063 FAT3Q8TDW7 4589 aa8.99□□□□□ -0.97
TRAFD1-203ENST00000547063 Q96NJ1 140 aa8.97□□□□□ -0.97
TRAFD1-203ENST00000547063 FP248Q71RG6 208 aaPredicted RBP8.96□□□□□ -0.98
TRAFD1-203ENST00000547063 SIGMAR1Q99720 223 aa8.96□□□□□ -0.98
TRAFD1-203ENST00000547063 BPY2O14599 106 aa8.95□□□□□ -0.98
TRAFD1-203ENST00000547063 IGKV4-1P06312 121 aa8.95□□□□□ -0.98
TRAFD1-203ENST00000547063 ATP5EP2Q5VTU8 51 aa8.93□□□□□ -0.98
TRAFD1-203ENST00000547063 LINC00643Q86TS7 51 aa8.93□□□□□ -0.98
TRAFD1-203ENST00000547063 RETNLBQ9BQ08 111 aa8.93□□□□□ -0.98
TRAFD1-203ENST00000547063 NDUFB1O75438 58 aa8.92□□□□□ -0.98
TRAFD1-203ENST00000547063 DEFB116Q30KQ4 102 aa8.92□□□□□ -0.98
TRAFD1-203ENST00000547063 CXCL6P80162 114 aa8.91□□□□□ -0.98
TRAFD1-203ENST00000547063 LCE2CQ5TA81 110 aa8.91□□□□□ -0.98
TRAFD1-203ENST00000547063 TNXBP22105 4242 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms