RNA–Protein interactions for RNA: ENST00000546312.5

SLC3A2-223, Transcript of solute carrier family 3 member 2, human

TSL 2

Gene SLC3A2, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLC3A2-223	ENST00000546312	NDUFC1	O43677	76 aa		5.88	□□□□□ -1.47
SLC3A2-223	ENST00000546312	ERC2-IT1	O76042	136 aa		5.88	□□□□□ -1.47
SLC3A2-223	ENST00000546312	RPS28	P62857	69 aa	Known RBP	5.88	□□□□□ -1.47
SLC3A2-223	ENST00000546312		A0A087WTM6	91 aa		5.87	□□□□□ -1.47
SLC3A2-223	ENST00000546312	BPY2	O14599	106 aa		5.87	□□□□□ -1.47
SLC3A2-223	ENST00000546312	KRTAP19-1	Q8IUB9	90 aa		5.87	□□□□□ -1.47
SLC3A2-223	ENST00000546312	DEFB105A	Q8NG35	78 aa		5.87	□□□□□ -1.47
SLC3A2-223	ENST00000546312		A0A1B0GVY2	172 aa		5.86	□□□□□ -1.47
SLC3A2-223	ENST00000546312	LRCOL1	A6NCL2	159 aa		5.86	□□□□□ -1.47
SLC3A2-223	ENST00000546312	C1orf137	Q5JT78	98 aa		5.86	□□□□□ -1.47
SLC3A2-223	ENST00000546312	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	5.86	□□□□□ -1.47
SLC3A2-223	ENST00000546312	FAM19A1	Q7Z5A9	133 aa		5.86	□□□□□ -1.47
SLC3A2-223	ENST00000546312	C9orf163	Q8N9P6	203 aa		5.86	□□□□□ -1.47
SLC3A2-223	ENST00000546312	SPRR4	Q96PI1	79 aa		5.86	□□□□□ -1.47
SLC3A2-223	ENST00000546312	SS18L2	Q9UHA2	77 aa		5.86	□□□□□ -1.47
SLC3A2-223	ENST00000546312	RYR3	Q15413	4870 aa		5.85	□□□□□ -1.47
SLC3A2-223	ENST00000546312		A0A087WVE0	104 aa		5.85	□□□□□ -1.47
SLC3A2-223	ENST00000546312		Q8NBF4	154 aa		5.85	□□□□□ -1.47
SLC3A2-223	ENST00000546312	IGLV8-61	A0A075B6I0	122 aa		5.84	□□□□□ -1.47
SLC3A2-223	ENST00000546312		Q9BRP9	147 aa		5.84	□□□□□ -1.47
SLC3A2-223	ENST00000546312	FRAS1	Q86XX4	4008 aa		5.83	□□□□□ -1.48
SLC3A2-223	ENST00000546312	FAM30A	Q9NZY2	134 aa		5.83	□□□□□ -1.48
SLC3A2-223	ENST00000546312	FAM168B	A1KXE4	195 aa		5.82	□□□□□ -1.48
SLC3A2-223	ENST00000546312	KRTAP4-12	Q9BQ66	201 aa		5.82	□□□□□ -1.48
SLC3A2-223	ENST00000546312		A0A096LNI7	61 aa		5.81	□□□□□ -1.48
SLC3A2-223	ENST00000546312	KRTAP23-1	A1A580	65 aa		5.81	□□□□□ -1.48
SLC3A2-223	ENST00000546312		J3KT08	172 aa		5.81	□□□□□ -1.48
SLC3A2-223	ENST00000546312	SPRR1B	P22528	89 aa		5.81	□□□□□ -1.48
SLC3A2-223	ENST00000546312	ATP5E	P56381	51 aa	Predicted RBP	5.81	□□□□□ -1.48
SLC3A2-223	ENST00000546312	RPL37A	P61513	92 aa	Known RBP	5.81	□□□□□ -1.48
SLC3A2-223	ENST00000546312	IGLV5-52	A0A0A0MRZ9	124 aa		5.8	□□□□□ -1.48
SLC3A2-223	ENST00000546312	KRTAP10-2	P60368	255 aa		5.8	□□□□□ -1.48
SLC3A2-223	ENST00000546312	KLKP1	Q107X0	134 aa		5.8	□□□□□ -1.48
SLC3A2-223	ENST00000546312	KRTAP7-1	Q8IUC3	87 aa		5.8	□□□□□ -1.48
SLC3A2-223	ENST00000546312	DNAH17	Q9UFH2	4485 aa		5.8	□□□□□ -1.48
SLC3A2-223	ENST00000546312	IGKV2-24	A0A0C4DH68	120 aa		5.79	□□□□□ -1.48
SLC3A2-223	ENST00000546312	DNAH10	Q8IVF4	4471 aa		5.79	□□□□□ -1.48
SLC3A2-223	ENST00000546312	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	5.78	□□□□□ -1.48
SLC3A2-223	ENST00000546312	UBE2A	P49459	152 aa		5.78	□□□□□ -1.48
SLC3A2-223	ENST00000546312	DPH3	Q96FX2	82 aa		5.78	□□□□□ -1.48
SLC3A2-223	ENST00000546312	KRTAP9-2	Q9BYQ4	174 aa		5.78	□□□□□ -1.48
SLC3A2-223	ENST00000546312	ZNF706	Q9Y5V0	76 aa	Predicted RBP	5.78	□□□□□ -1.48
SLC3A2-223	ENST00000546312		A0A1W2PNM2	257 aa		5.77	□□□□□ -1.49
SLC3A2-223	ENST00000546312		A0A1W2PNN7	141 aa		5.77	□□□□□ -1.49
SLC3A2-223	ENST00000546312	EPM2A	B3EWF7	344 aa		5.77	□□□□□ -1.49
SLC3A2-223	ENST00000546312	C20orf197	Q8N268	126 aa		5.77	□□□□□ -1.49
SLC3A2-223	ENST00000546312	IGKV4-1	P06312	121 aa		5.76	□□□□□ -1.49
SLC3A2-223	ENST00000546312	SMIM29	Q86T20	159 aa		5.76	□□□□□ -1.49
SLC3A2-223	ENST00000546312	ST20-AS1	Q8NBB2	130 aa		5.76	□□□□□ -1.49
SLC3A2-223	ENST00000546312	HIGD2A	Q9BW72	106 aa		5.76	□□□□□ -1.49
SLC3A2-223	ENST00000546312	DNAH2	Q9P225	4427 aa		5.76	□□□□□ -1.49
SLC3A2-223	ENST00000546312	SVIP	Q8NHG7	77 aa		5.75	□□□□□ -1.49
SLC3A2-223	ENST00000546312	KRTAP9-6	A0A140TA67	174 aa		5.74	□□□□□ -1.49
SLC3A2-223	ENST00000546312	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	5.74	□□□□□ -1.49
SLC3A2-223	ENST00000546312	PKD1	P98161	4303 aa		5.74	□□□□□ -1.49
SLC3A2-223	ENST00000546312	CDK2AP2	O75956	126 aa		5.73	□□□□□ -1.49
SLC3A2-223	ENST00000546312	C5orf47	Q569G3	176 aa		5.73	□□□□□ -1.49
SLC3A2-223	ENST00000546312	KRTAP3-1	Q9BYR8	98 aa		5.73	□□□□□ -1.49
SLC3A2-223	ENST00000546312	FAM236D	A0A1B0GTK5	79 aa		5.72	□□□□□ -1.49
SLC3A2-223	ENST00000546312	FAM236C	P0DP71	79 aa		5.72	□□□□□ -1.49
SLC3A2-223	ENST00000546312	KRTAP10-1	P60331	282 aa		5.72	□□□□□ -1.49
SLC3A2-223	ENST00000546312	PRLH	P81277	87 aa		5.72	□□□□□ -1.49
SLC3A2-223	ENST00000546312	LCE3B	Q5TA77	95 aa		5.72	□□□□□ -1.49
SLC3A2-223	ENST00000546312	IGFL1	Q6UW32	110 aa		5.72	□□□□□ -1.49
SLC3A2-223	ENST00000546312	SCX	Q7RTU7	201 aa		5.72	□□□□□ -1.49
SLC3A2-223	ENST00000546312	FAT2	Q9NYQ8	4349 aa		5.71	□□□□□ -1.5
SLC3A2-223	ENST00000546312	PHF5A	Q7RTV0	110 aa	Known RBP	5.71	□□□□□ -1.5
SLC3A2-223	ENST00000546312	TMEM254	Q8TBM7	123 aa		5.71	□□□□□ -1.5
SLC3A2-223	ENST00000546312	SPACA4	Q8TDM5	124 aa		5.71	□□□□□ -1.5
SLC3A2-223	ENST00000546312	OCR1	Q9BZK8	76 aa		5.71	□□□□□ -1.5
SLC3A2-223	ENST00000546312	SERP1	Q9Y6X1	66 aa		5.71	□□□□□ -1.5
SLC3A2-223	ENST00000546312	NDUFB1	O75438	58 aa		5.7	□□□□□ -1.5
SLC3A2-223	ENST00000546312	HECTD4	Q9Y4D8	3996 aa		5.7	□□□□□ -1.5
SLC3A2-223	ENST00000546312	HCG22	E2RYF7	251 aa		5.69	□□□□□ -1.5
SLC3A2-223	ENST00000546312		H3BPC8	53 aa		5.69	□□□□□ -1.5
SLC3A2-223	ENST00000546312		H7BZZ5	65 aa		5.69	□□□□□ -1.5
SLC3A2-223	ENST00000546312		Q6ZSA8	131 aa		5.68	□□□□□ -1.5
SLC3A2-223	ENST00000546312	KRTAP13-1	Q8IUC0	172 aa		5.68	□□□□□ -1.5
SLC3A2-223	ENST00000546312	PLAC8	Q9NZF1	115 aa		5.68	□□□□□ -1.5
SLC3A2-223	ENST00000546312		A0A087WSZ3	146 aa		5.67	□□□□□ -1.5
SLC3A2-223	ENST00000546312	CHTF8	P0CG12	524 aa		5.67	□□□□□ -1.5
SLC3A2-223	ENST00000546312	DSCR10	P59022	87 aa		5.67	□□□□□ -1.5
SLC3A2-223	ENST00000546312	LINC00483	Q53H64	154 aa		5.67	□□□□□ -1.5
SLC3A2-223	ENST00000546312	EPPK1	P58107	5090 aa	Known RBP	5.67	□□□□□ -1.5
SLC3A2-223	ENST00000546312		A0A0U1RQV1	116 aa		5.66	□□□□□ -1.5
SLC3A2-223	ENST00000546312	MP68	P56378	58 aa		5.66	□□□□□ -1.5
SLC3A2-223	ENST00000546312		A8MWP4	228 aa		5.65	□□□□□ -1.5
SLC3A2-223	ENST00000546312		Q8N9L7	120 aa		5.65	□□□□□ -1.5
SLC3A2-223	ENST00000546312	ZNF861P	O60384	105 aa		5.64	□□□□□ -1.51
SLC3A2-223	ENST00000546312	PRR15	Q8IV56	129 aa		5.64	□□□□□ -1.51
SLC3A2-223	ENST00000546312	DNAH11	Q96DT5	4516 aa		5.64	□□□□□ -1.51
SLC3A2-223	ENST00000546312		K7EQZ3	153 aa		5.63	□□□□□ -1.51
SLC3A2-223	ENST00000546312	CIRBP-AS1	Q8TBR5	109 aa		5.63	□□□□□ -1.51
SLC3A2-223	ENST00000546312	TP53AIP1	Q9HCN2	124 aa		5.63	□□□□□ -1.51
SLC3A2-223	ENST00000546312	SNURF	Q9Y675	71 aa		5.63	□□□□□ -1.51
SLC3A2-223	ENST00000546312	PKHD1	P08F94	4074 aa		5.63	□□□□□ -1.51
SLC3A2-223	ENST00000546312	SMIM26	A0A096LP01	95 aa		5.62	□□□□□ -1.51
SLC3A2-223	ENST00000546312		Q8N1X5	172 aa		5.62	□□□□□ -1.51
SLC3A2-223	ENST00000546312	LINC00472	Q9H8W2	130 aa		5.62	□□□□□ -1.51
SLC3A2-223	ENST00000546312	CD164	Q04900	197 aa		5.61	□□□□□ -1.51

Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms