RNA–Protein interactions for RNA: ENST00000544336.5

PDCD2-211, Transcript of programmed cell death 2, humanhuman

TSL 1 (best)

Gene PDCD2, Length 1,164 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-211ENST00000544336 FLGP20930 4061 aaPredicted RBP14.46□□□□□ -0.09
PDCD2-211ENST00000544336 VAMP3Q15836 100 aa14.46□□□□□ -0.09
PDCD2-211ENST00000544336 LINC00575Q6W349 94 aa14.44□□□□□ -0.1
PDCD2-211ENST00000544336 Q6ZQY7 126 aa14.44□□□□□ -0.1
PDCD2-211ENST00000544336 TRBV7-7A0A0K0K1E9 115 aa14.4□□□□□ -0.1
PDCD2-211ENST00000544336 hADV29S1A0JD25 119 aa14.4□□□□□ -0.1
PDCD2-211ENST00000544336 Q6JHZ5 121 aa14.4□□□□□ -0.1
PDCD2-211ENST00000544336 IGFL1Q6UW32 110 aa14.4□□□□□ -0.1
PDCD2-211ENST00000544336 CLEC2BQ92478 149 aa14.4□□□□□ -0.1
PDCD2-211ENST00000544336 Q6Q795 121 aa14.38□□□□□ -0.11
PDCD2-211ENST00000544336 OBSCN-AS1Q96MR7 158 aa14.38□□□□□ -0.11
PDCD2-211ENST00000544336 SNRPEP62304 92 aaKnown RBP14.34□□□□□ -0.11
PDCD2-211ENST00000544336 OCIAD2Q56VL3 154 aa14.34□□□□□ -0.11
PDCD2-211ENST00000544336 ATP11AUNQ6ZP68 121 aa14.34□□□□□ -0.11
PDCD2-211ENST00000544336 Q75L30 129 aa14.3□□□□□ -0.12
PDCD2-211ENST00000544336 C12orf57Q99622 126 aa14.27□□□□□ -0.13
PDCD2-211ENST00000544336 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP14.26□□□□□ -0.13
PDCD2-211ENST00000544336 H3BUT2 72 aa14.25□□□□□ -0.13
PDCD2-211ENST00000544336 SNHG12Q9BXW3 62 aa14.25□□□□□ -0.13
PDCD2-211ENST00000544336 HSBP1L1C9JCN9 74 aa14.24□□□□□ -0.13
PDCD2-211ENST00000544336 LST1O00453 97 aa14.24□□□□□ -0.13
PDCD2-211ENST00000544336 Q96NJ1 140 aa14.23□□□□□ -0.13
PDCD2-211ENST00000544336 BVES-AS1Q5T3Y7 98 aa14.2□□□□□ -0.14
PDCD2-211ENST00000544336 PPDPFLQ8WWR9 84 aa14.19□□□□□ -0.14
PDCD2-211ENST00000544336 HIST3H2BBQ8N257 126 aa14.18□□□□□ -0.14
PDCD2-211ENST00000544336 HIST1H2BLQ99880 126 aa14.18□□□□□ -0.14
PDCD2-211ENST00000544336 S100A2P29034 98 aa14.17□□□□□ -0.14
PDCD2-211ENST00000544336 HIST1H4GQ99525 98 aa14.15□□□□□ -0.14
PDCD2-211ENST00000544336 SCGB1D1O95968 90 aa14.14□□□□□ -0.15
PDCD2-211ENST00000544336 SS18L2Q9UHA2 77 aa14.11□□□□□ -0.15
PDCD2-211ENST00000544336 C20orf166-AS1Q96NR2 134 aa14.07□□□□□ -0.16
PDCD2-211ENST00000544336 A8MUU9 505 aa14.05□□□□□ -0.16
PDCD2-211ENST00000544336 TEN1Q86WV5 123 aa14.04□□□□□ -0.16
PDCD2-211ENST00000544336 A0A087WSZ3 146 aa14.02□□□□□ -0.17
PDCD2-211ENST00000544336 NDUFV3P56181 108 aaKnown RBP14.02□□□□□ -0.17
PDCD2-211ENST00000544336 TRBV20-1A0A075B6N2 111 aa14.01□□□□□ -0.17
PDCD2-211ENST00000544336 SNCGO76070 127 aa14□□□□□ -0.17
PDCD2-211ENST00000544336 CFC1P0CG37 223 aa14□□□□□ -0.17
PDCD2-211ENST00000544336 COX8AP10176 69 aa14□□□□□ -0.17
PDCD2-211ENST00000544336 RAB37Q96AX2 223 aa14□□□□□ -0.17
PDCD2-211ENST00000544336 FAM218AQ96MZ4 157 aa14□□□□□ -0.17
PDCD2-211ENST00000544336 KRTAP9-8Q9BYQ0 159 aa14□□□□□ -0.17
PDCD2-211ENST00000544336 DSCR10P59022 87 aa13.99□□□□□ -0.17
PDCD2-211ENST00000544336 H0YGX0 51 aa13.95□□□□□ -0.18
PDCD2-211ENST00000544336 S100A6P06703 90 aa13.95□□□□□ -0.18
PDCD2-211ENST00000544336 H3BMG7 143 aa13.94□□□□□ -0.18
PDCD2-211ENST00000544336 SIGMAR1Q99720 223 aa13.92□□□□□ -0.18
PDCD2-211ENST00000544336 DLEU1O43261 78 aa13.9□□□□□ -0.18
PDCD2-211ENST00000544336 FABP2P12104 132 aa13.9□□□□□ -0.18
PDCD2-211ENST00000544336 C14orf144Q96I85 54 aa13.9□□□□□ -0.18
PDCD2-211ENST00000544336 A0A0B4J2C4 111 aa13.89□□□□□ -0.19
PDCD2-211ENST00000544336 KRTAP9-1A8MXZ3 250 aaPredicted RBP13.89□□□□□ -0.19
PDCD2-211ENST00000544336 USH2AO75445 5202 aa13.87□□□□□ -0.19
PDCD2-211ENST00000544336 FAM236DA0A1B0GTK5 79 aa13.86□□□□□ -0.19
PDCD2-211ENST00000544336 FAM236CP0DP71 79 aa13.86□□□□□ -0.19
PDCD2-211ENST00000544336 A0A1W2PNM2 257 aa13.85□□□□□ -0.19
PDCD2-211ENST00000544336 KRTAP16-1A8MUX0 517 aa13.85□□□□□ -0.19
PDCD2-211ENST00000544336 SSPOA2VEC9 5147 aa13.85□□□□□ -0.19
PDCD2-211ENST00000544336 KRTAP9-7A8MTY7 169 aa13.84□□□□□ -0.19
PDCD2-211ENST00000544336 LINC00313P59037 77 aa13.82□□□□□ -0.2
PDCD2-211ENST00000544336 HIGD1BQ9P298 99 aa13.82□□□□□ -0.2
PDCD2-211ENST00000544336 GHRHP01286 108 aa13.81□□□□□ -0.2
PDCD2-211ENST00000544336 IGKV4-1P06312 121 aa13.8□□□□□ -0.2
PDCD2-211ENST00000544336 PAM16Q9Y3D7 125 aa13.8□□□□□ -0.2
PDCD2-211ENST00000544336 A0A1B0GV72 72 aa13.79□□□□□ -0.2
PDCD2-211ENST00000544336 A0A1B0GX51 115 aa13.79□□□□□ -0.2
PDCD2-211ENST00000544336 MT2AP02795 61 aa13.79□□□□□ -0.2
PDCD2-211ENST00000544336 SPATA45Q537H7 98 aa13.78□□□□□ -0.2
PDCD2-211ENST00000544336 C2orf91Q6ZV80 131 aa13.78□□□□□ -0.2
PDCD2-211ENST00000544336 PRO1854Q9UHT4 67 aa13.76□□□□□ -0.21
PDCD2-211ENST00000544336 CEND1Q8N111 149 aa13.75□□□□□ -0.21
PDCD2-211ENST00000544336 NOTCH2NLQ7Z3S9 236 aa13.74□□□□□ -0.21
PDCD2-211ENST00000544336 ANKRD29Q8N6D5 301 aa13.74□□□□□ -0.21
PDCD2-211ENST00000544336 DEFB116Q30KQ4 102 aa13.73□□□□□ -0.21
PDCD2-211ENST00000544336 TRIAP1O43715 76 aa13.72□□□□□ -0.21
PDCD2-211ENST00000544336 RBM12B-AS1Q9P1G2 102 aa13.71□□□□□ -0.21
PDCD2-211ENST00000544336 HRES1P13985 223 aa13.7□□□□□ -0.22
PDCD2-211ENST00000544336 TRBV7-4A0A0J9YYF1 115 aa13.69□□□□□ -0.22
PDCD2-211ENST00000544336 TMEM238LA0A1B0GVL6 79 aa13.69□□□□□ -0.22
PDCD2-211ENST00000544336 A6NJY4 79 aa13.69□□□□□ -0.22
PDCD2-211ENST00000544336 MT1FP04733 61 aa13.69□□□□□ -0.22
PDCD2-211ENST00000544336 FXYD2P54710 66 aa13.68□□□□□ -0.22
PDCD2-211ENST00000544336 VAMP8Q9BV40 100 aa13.68□□□□□ -0.22
PDCD2-211ENST00000544336 DNAL4O96015 105 aa13.66□□□□□ -0.22
PDCD2-211ENST00000544336 S100A1P23297 94 aa13.66□□□□□ -0.22
PDCD2-211ENST00000544336 MPLKIPQ8TAP9 179 aa13.66□□□□□ -0.22
PDCD2-211ENST00000544336 ORMDL1Q9P0S3 153 aa13.66□□□□□ -0.22
PDCD2-211ENST00000544336 IGHV6-1A0A0B4J1U7 121 aa13.65□□□□□ -0.22
PDCD2-211ENST00000544336 LCE2BO14633 110 aa13.63□□□□□ -0.23
PDCD2-211ENST00000544336 LINC00472Q9H8W2 130 aa13.63□□□□□ -0.23
PDCD2-211ENST00000544336 KRTAP10-10P60014 251 aa13.62□□□□□ -0.23
PDCD2-211ENST00000544336 CCKP06307 115 aa13.61□□□□□ -0.23
PDCD2-211ENST00000544336 TRACP01848 142 aa13.6□□□□□ -0.23
PDCD2-211ENST00000544336 PSMB2P49721 201 aa13.59□□□□□ -0.23
PDCD2-211ENST00000544336 KRTAP19-1Q8IUB9 90 aa13.58□□□□□ -0.24
PDCD2-211ENST00000544336 KRTAP9-3Q9BYQ3 159 aa13.58□□□□□ -0.24
PDCD2-211ENST00000544336 H3BQ85 93 aa13.56□□□□□ -0.24
PDCD2-211ENST00000544336 FCGBPQ9Y6R7 5405 aaPredicted RBP13.56□□□□□ -0.24
PDCD2-211ENST00000544336 TMEM256-PLSCR3K7ERE1 68 aa13.55□□□□□ -0.24
PDCD2-211ENST00000544336 K7ERJ3 54 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms