RNA–Protein interactions for RNA: ENST00000544293.1

C2CD3-220, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2

Gene C2CD3, Length 731 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-220ENST00000544293 CBY1Q9Y3M2 126 aa4.72□□□□□ -1.65
C2CD3-220ENST00000544293 E9PLD3 99 aa4.71□□□□□ -1.66
C2CD3-220ENST00000544293 DPM2O94777 84 aa4.71□□□□□ -1.66
C2CD3-220ENST00000544293 PLNP26678 52 aa4.71□□□□□ -1.66
C2CD3-220ENST00000544293 PCP2Q8IVA1 136 aa4.71□□□□□ -1.66
C2CD3-220ENST00000544293 TRBV7-6A0A0J9YX20 115 aa4.7□□□□□ -1.66
C2CD3-220ENST00000544293 HSBP1O75506 76 aa4.7□□□□□ -1.66
C2CD3-220ENST00000544293 IGKCP01834 107 aa4.7□□□□□ -1.66
C2CD3-220ENST00000544293 C20orf166-AS1Q96NR2 134 aa4.7□□□□□ -1.66
C2CD3-220ENST00000544293 NEBP20929 6669 aa4.7□□□□□ -1.66
C2CD3-220ENST00000544293 A8MUU9 505 aa4.69□□□□□ -1.66
C2CD3-220ENST00000544293 LEPROTL1O95214 131 aa4.69□□□□□ -1.66
C2CD3-220ENST00000544293 HERVK_113P61574 105 aa4.69□□□□□ -1.66
C2CD3-220ENST00000544293 MPLKIPQ8TAP9 179 aa4.69□□□□□ -1.66
C2CD3-220ENST00000544293 TRBV7-7A0A0K0K1E9 115 aa4.68□□□□□ -1.66
C2CD3-220ENST00000544293 TIMM17BO60830 172 aa4.68□□□□□ -1.66
C2CD3-220ENST00000544293 LINC00518Q8N0U6 118 aa4.68□□□□□ -1.66
C2CD3-220ENST00000544293 Q96NJ1 140 aa4.68□□□□□ -1.66
C2CD3-220ENST00000544293 TTTY13Q9BZ97 58 aa4.68□□□□□ -1.66
C2CD3-220ENST00000544293 A0A1B0GWB2 263 aa4.67□□□□□ -1.66
C2CD3-220ENST00000544293 SERF1AO75920 110 aa4.67□□□□□ -1.66
C2CD3-220ENST00000544293 FABP4P15090 132 aa4.67□□□□□ -1.66
C2CD3-220ENST00000544293 IGFL1Q6UW32 110 aa4.66□□□□□ -1.66
C2CD3-220ENST00000544293 HRES1P13985 223 aa4.65□□□□□ -1.67
C2CD3-220ENST00000544293 TRBV20-1A0A075B6N2 111 aa4.64□□□□□ -1.67
C2CD3-220ENST00000544293 KRTAP15-1Q3LI76 137 aa4.64□□□□□ -1.67
C2CD3-220ENST00000544293 APOC3P02656 99 aa4.63□□□□□ -1.67
C2CD3-220ENST00000544293 TRGC2P03986 189 aa4.63□□□□□ -1.67
C2CD3-220ENST00000544293 HSPB8Q9UJY1 196 aa4.63□□□□□ -1.67
C2CD3-220ENST00000544293 ZNF815PA8K554 130 aa4.61□□□□□ -1.67
C2CD3-220ENST00000544293 OCIAD2Q56VL3 154 aa4.61□□□□□ -1.67
C2CD3-220ENST00000544293 SMIM11BQ8TCY0 68 aa4.61□□□□□ -1.67
C2CD3-220ENST00000544293 CLEC2BQ92478 149 aa4.61□□□□□ -1.67
C2CD3-220ENST00000544293 LINC00846Q9NV44 126 aa4.61□□□□□ -1.67
C2CD3-220ENST00000544293 A4D1N5 150 aa4.6□□□□□ -1.67
C2CD3-220ENST00000544293 A6NDN8 102 aa4.6□□□□□ -1.67
C2CD3-220ENST00000544293 Q6JHZ5 121 aa4.6□□□□□ -1.67
C2CD3-220ENST00000544293 NOTCH2NLQ7Z3S9 236 aa4.6□□□□□ -1.67
C2CD3-220ENST00000544293 MUC12Q9UKN1 5478 aa4.59□□□□□ -1.67
C2CD3-220ENST00000544293 SYS1-DBNDD2H3BUS1 97 aa4.59□□□□□ -1.67
C2CD3-220ENST00000544293 LST1O00453 97 aa4.59□□□□□ -1.67
C2CD3-220ENST00000544293 SNAPINO95295 136 aa4.59□□□□□ -1.67
C2CD3-220ENST00000544293 LINC00575Q6W349 94 aa4.59□□□□□ -1.67
C2CD3-220ENST00000544293 LINC01545Q5VT33 79 aa4.58□□□□□ -1.68
C2CD3-220ENST00000544293 MUSTN1Q8IVN3 82 aa4.58□□□□□ -1.68
C2CD3-220ENST00000544293 SVBPQ8N300 66 aa4.58□□□□□ -1.68
C2CD3-220ENST00000544293 FAM236DA0A1B0GTK5 79 aa4.57□□□□□ -1.68
C2CD3-220ENST00000544293 F8WEM9 126 aa4.57□□□□□ -1.68
C2CD3-220ENST00000544293 FAM236CP0DP71 79 aa4.57□□□□□ -1.68
C2CD3-220ENST00000544293 DSCR10P59022 87 aa4.57□□□□□ -1.68
C2CD3-220ENST00000544293 Q6ZQY7 126 aa4.57□□□□□ -1.68
C2CD3-220ENST00000544293 NHP2Q9NX24 153 aaKnown RBP4.56□□□□□ -1.68
C2CD3-220ENST00000544293 TRAV13-2A0A0B4J235 113 aa4.55□□□□□ -1.68
C2CD3-220ENST00000544293 H3BUT2 72 aa4.55□□□□□ -1.68
C2CD3-220ENST00000544293 IFITM1P13164 125 aa4.55□□□□□ -1.68
C2CD3-220ENST00000544293 SLC7A5P1Q8MH63 180 aa4.54□□□□□ -1.68
C2CD3-220ENST00000544293 hADV29S1A0JD25 119 aa4.53□□□□□ -1.68
C2CD3-220ENST00000544293 KRTAP20-1Q3LI63 56 aa4.52□□□□□ -1.69
C2CD3-220ENST00000544293 RBM12B-AS1Q9P1G2 102 aa4.52□□□□□ -1.69
C2CD3-220ENST00000544293 COLCA2A8K830 154 aa4.51□□□□□ -1.69
C2CD3-220ENST00000544293 PET117Q6UWS5 81 aa4.51□□□□□ -1.69
C2CD3-220ENST00000544293 SCGB1D4Q6XE38 83 aa4.51□□□□□ -1.69
C2CD3-220ENST00000544293 Q6ZVH6 145 aa4.51□□□□□ -1.69
C2CD3-220ENST00000544293 Q8N9P0 234 aaPredicted RBP4.51□□□□□ -1.69
C2CD3-220ENST00000544293 NDUFA5Q16718 116 aa4.5□□□□□ -1.69
C2CD3-220ENST00000544293 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.5□□□□□ -1.69
C2CD3-220ENST00000544293 A0A087WSZ3 146 aa4.49□□□□□ -1.69
C2CD3-220ENST00000544293 C3orf79P0CE67 100 aa4.49□□□□□ -1.69
C2CD3-220ENST00000544293 LINC00313P59037 77 aa4.48□□□□□ -1.69
C2CD3-220ENST00000544293 VAMP3Q15836 100 aa4.48□□□□□ -1.69
C2CD3-220ENST00000544293 TEN1Q86WV5 123 aa4.48□□□□□ -1.69
C2CD3-220ENST00000544293 PPDPFLQ8WWR9 84 aa4.47□□□□□ -1.69
C2CD3-220ENST00000544293 COPS9Q8WXC6 57 aa4.47□□□□□ -1.69
C2CD3-220ENST00000544293 SNHG12Q9BXW3 62 aa4.47□□□□□ -1.69
C2CD3-220ENST00000544293 SS18L2Q9UHA2 77 aa4.47□□□□□ -1.69
C2CD3-220ENST00000544293 A0A1W2PNM2 257 aa4.45□□□□□ -1.7
C2CD3-220ENST00000544293 A8MWP4 228 aa4.45□□□□□ -1.7
C2CD3-220ENST00000544293 HIST1H2BKO60814 126 aa4.45□□□□□ -1.7
C2CD3-220ENST00000544293 HIST1H2BJP06899 126 aa4.45□□□□□ -1.7
C2CD3-220ENST00000544293 HIST1H2BOP23527 126 aa4.45□□□□□ -1.7
C2CD3-220ENST00000544293 HIST1H2BBP33778 126 aa4.45□□□□□ -1.7
C2CD3-220ENST00000544293 PCP4P48539 62 aa4.45□□□□□ -1.7
C2CD3-220ENST00000544293 HIST1H2BDP58876 126 aa4.45□□□□□ -1.7
C2CD3-220ENST00000544293 HIST1H2BCP62807 126 aa4.45□□□□□ -1.7
C2CD3-220ENST00000544293 HIST2H2BEQ16778 126 aa4.45□□□□□ -1.7
C2CD3-220ENST00000544293 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.45□□□□□ -1.7
C2CD3-220ENST00000544293 HIST1H2BHQ93079 126 aa4.45□□□□□ -1.7
C2CD3-220ENST00000544293 HIST1H2BNQ99877 126 aa4.45□□□□□ -1.7
C2CD3-220ENST00000544293 HIST1H2BMQ99879 126 aa4.45□□□□□ -1.7
C2CD3-220ENST00000544293 ATOH7Q8N100 152 aa4.44□□□□□ -1.7
C2CD3-220ENST00000544293 SCGB1D1O95968 90 aa4.43□□□□□ -1.7
C2CD3-220ENST00000544293 NDUFV3P56181 108 aaKnown RBP4.42□□□□□ -1.7
C2CD3-220ENST00000544293 SPINK7P58062 85 aa4.42□□□□□ -1.7
C2CD3-220ENST00000544293 FAM218AQ96MZ4 157 aa4.42□□□□□ -1.7
C2CD3-220ENST00000544293 KMT2DO14686 5537 aa4.42□□□□□ -1.7
C2CD3-220ENST00000544293 KRTAP5-9P26371 169 aa4.41□□□□□ -1.7
C2CD3-220ENST00000544293 DEFB116Q30KQ4 102 aa4.41□□□□□ -1.7
C2CD3-220ENST00000544293 SIGMAR1Q99720 223 aa4.41□□□□□ -1.7
C2CD3-220ENST00000544293 LINC00472Q9H8W2 130 aa4.41□□□□□ -1.7
C2CD3-220ENST00000544293 IGKV4-1P06312 121 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms