RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 IGLV5-48A0A075B6I7 105 aa8.4□□□□□ -1.06
HCFC2-202ENST00000544223 CIRBP-AS1Q8TBR5 109 aa8.4□□□□□ -1.06
HCFC2-202ENST00000544223 SS18L2Q9UHA2 77 aa8.4□□□□□ -1.06
HCFC2-202ENST00000544223 DYNC1H1Q14204 4646 aaKnown RBP8.4□□□□□ -1.07
HCFC2-202ENST00000544223 C1orf137Q5JT78 98 aa8.39□□□□□ -1.07
HCFC2-202ENST00000544223 PLAC8Q9NZF1 115 aa8.39□□□□□ -1.07
HCFC2-202ENST00000544223 BCE1O60756 84 aa8.39□□□□□ -1.07
HCFC2-202ENST00000544223 A0A087WVE0 104 aa8.38□□□□□ -1.07
HCFC2-202ENST00000544223 SCXQ7RTU7 201 aa8.38□□□□□ -1.07
HCFC2-202ENST00000544223 LINC00643Q86TS7 51 aa8.38□□□□□ -1.07
HCFC2-202ENST00000544223 TRBV7-7A0A0K0K1E9 115 aa8.37□□□□□ -1.07
HCFC2-202ENST00000544223 CCDC179H3BU77 68 aa8.37□□□□□ -1.07
HCFC2-202ENST00000544223 KRTAP13-1Q8IUC0 172 aa8.37□□□□□ -1.07
HCFC2-202ENST00000544223 PKIGQ9Y2B9 76 aa8.36□□□□□ -1.07
HCFC2-202ENST00000544223 A0A1W2PNM2 257 aa8.36□□□□□ -1.07
HCFC2-202ENST00000544223 GHRHP01286 108 aa8.35□□□□□ -1.07
HCFC2-202ENST00000544223 H3BQ85 93 aa8.34□□□□□ -1.07
HCFC2-202ENST00000544223 Q6ZVQ6 151 aa8.34□□□□□ -1.07
HCFC2-202ENST00000544223 FAT1Q14517 4588 aa8.34□□□□□ -1.07
HCFC2-202ENST00000544223 IMUPQ9GZP8 106 aa8.33□□□□□ -1.08
HCFC2-202ENST00000544223 LCE6AA0A183 80 aa8.33□□□□□ -1.08
HCFC2-202ENST00000544223 HIST1H4AP62805 103 aaKnown RBP8.32□□□□□ -1.08
HCFC2-202ENST00000544223 UBL5Q9BZL1 73 aa8.32□□□□□ -1.08
HCFC2-202ENST00000544223 IGFL1Q6UW32 110 aa8.32□□□□□ -1.08
HCFC2-202ENST00000544223 IGLV9-49A0A0B4J1Y8 123 aa8.31□□□□□ -1.08
HCFC2-202ENST00000544223 Q8N9L7 120 aa8.31□□□□□ -1.08
HCFC2-202ENST00000544223 FAM236AA0A1B0GUQ0 79 aa8.3□□□□□ -1.08
HCFC2-202ENST00000544223 FAM236BA0A1B0GV22 79 aa8.3□□□□□ -1.08
HCFC2-202ENST00000544223 H0Y9J4 135 aa8.3□□□□□ -1.08
HCFC2-202ENST00000544223 F8WEM9 126 aa8.29□□□□□ -1.08
HCFC2-202ENST00000544223 PDE6GP18545 87 aa8.29□□□□□ -1.08
HCFC2-202ENST00000544223 DEFB116Q30KQ4 102 aa8.29□□□□□ -1.08
HCFC2-202ENST00000544223 Q6JHZ5 121 aa8.28□□□□□ -1.08
HCFC2-202ENST00000544223 APOBP04114 4563 aaKnown RBP8.27□□□□□ -1.09
HCFC2-202ENST00000544223 HRCT1Q6UXD1 115 aa8.27□□□□□ -1.09
HCFC2-202ENST00000544223 Q6ZSA8 131 aa8.27□□□□□ -1.09
HCFC2-202ENST00000544223 ZNF861PO60384 105 aa8.26□□□□□ -1.09
HCFC2-202ENST00000544223 SPRR4Q96PI1 79 aa8.26□□□□□ -1.09
HCFC2-202ENST00000544223 Q8NBF4 154 aa8.25□□□□□ -1.09
HCFC2-202ENST00000544223 IGLV7-43P04211 117 aa8.25□□□□□ -1.09
HCFC2-202ENST00000544223 SMR3BP02814 79 aaPredicted RBP8.24□□□□□ -1.09
HCFC2-202ENST00000544223 NREPQ16612 68 aa8.24□□□□□ -1.09
HCFC2-202ENST00000544223 C9orf153Q5TBE3 101 aa8.24□□□□□ -1.09
HCFC2-202ENST00000544223 A0A087WSZ3 146 aa8.23□□□□□ -1.09
HCFC2-202ENST00000544223 BPY2O14599 106 aa8.22□□□□□ -1.09
HCFC2-202ENST00000544223 SPRR1BP22528 89 aa8.22□□□□□ -1.09
HCFC2-202ENST00000544223 SMIM20Q8N5G0 67 aa8.21□□□□□ -1.1
HCFC2-202ENST00000544223 MOBPQ13875 183 aa8.21□□□□□ -1.1
HCFC2-202ENST00000544223 UQCRQO14949 82 aa8.19□□□□□ -1.1
HCFC2-202ENST00000544223 CRYGAP11844 174 aa8.19□□□□□ -1.1
HCFC2-202ENST00000544223 IGLV8-61A0A075B6I0 122 aa8.18□□□□□ -1.1
HCFC2-202ENST00000544223 A0A1B0GVY2 172 aa8.18□□□□□ -1.1
HCFC2-202ENST00000544223 RPL37AP61513 92 aaKnown RBP8.17□□□□□ -1.1
HCFC2-202ENST00000544223 LINC00483Q53H64 154 aa8.15□□□□□ -1.1
HCFC2-202ENST00000544223 EPPK1P58107 5090 aaKnown RBP8.15□□□□□ -1.11
HCFC2-202ENST00000544223 ATOX1O00244 68 aa8.14□□□□□ -1.11
HCFC2-202ENST00000544223 A0A087X002 238 aa8.14□□□□□ -1.11
HCFC2-202ENST00000544223 COX7CP15954 63 aa8.14□□□□□ -1.11
HCFC2-202ENST00000544223 ATP5EP2Q5VTU8 51 aa8.14□□□□□ -1.11
HCFC2-202ENST00000544223 CXCL6P80162 114 aa8.13□□□□□ -1.11
HCFC2-202ENST00000544223 LINC00336Q6ZUF6 198 aa8.12□□□□□ -1.11
HCFC2-202ENST00000544223 IGKV4-1P06312 121 aa8.12□□□□□ -1.11
HCFC2-202ENST00000544223 K7EQZ3 153 aa8.11□□□□□ -1.11
HCFC2-202ENST00000544223 DSCR10P59022 87 aa8.11□□□□□ -1.11
HCFC2-202ENST00000544223 ZNF706Q9Y5V0 76 aaPredicted RBP8.11□□□□□ -1.11
HCFC2-202ENST00000544223 KRTAP13-2Q52LG2 175 aa8.07□□□□□ -1.12
HCFC2-202ENST00000544223 KIAA1109Q2LD37 5005 aa8.07□□□□□ -1.12
HCFC2-202ENST00000544223 HSPG2P98160 4391 aa8.07□□□□□ -1.12
HCFC2-202ENST00000544223 LRP1Q07954 4544 aaKnown RBP8.06□□□□□ -1.12
HCFC2-202ENST00000544223 KRTAP1-4P0C5Y4 121 aa8.04□□□□□ -1.12
HCFC2-202ENST00000544223 SERP2Q8N6R1 65 aa8.04□□□□□ -1.12
HCFC2-202ENST00000544223 CYSTM1Q9H1C7 97 aa8.04□□□□□ -1.12
HCFC2-202ENST00000544223 LINC00472Q9H8W2 130 aa8.03□□□□□ -1.12
HCFC2-202ENST00000544223 A0A1B0GW54 56 aa8.02□□□□□ -1.12
HCFC2-202ENST00000544223 J3KT08 172 aa8.02□□□□□ -1.12
HCFC2-202ENST00000544223 PLA2G1BP04054 148 aaKnown RBP8.01□□□□□ -1.13
HCFC2-202ENST00000544223 Q96NJ1 140 aa8.01□□□□□ -1.13
HCFC2-202ENST00000544223 SPINK6Q6UWN8 80 aa8.01□□□□□ -1.13
HCFC2-202ENST00000544223 WFDC13Q8IUB5 93 aa8.01□□□□□ -1.13
HCFC2-202ENST00000544223 TMEM258P61165 79 aa8□□□□□ -1.13
HCFC2-202ENST00000544223 RPS28P62857 69 aaKnown RBP7.99□□□□□ -1.13
HCFC2-202ENST00000544223 RYR1P21817 5038 aa7.99□□□□□ -1.13
HCFC2-202ENST00000544223 PKHD1L1Q86WI1 4243 aa7.99□□□□□ -1.13
HCFC2-202ENST00000544223 MYCBP2O75592 4640 aa7.98□□□□□ -1.13
HCFC2-202ENST00000544223 PRR26Q8N8Z3 221 aa7.97□□□□□ -1.13
HCFC2-202ENST00000544223 KRTAP17-1Q9BYP8 105 aa7.97□□□□□ -1.13
HCFC2-202ENST00000544223 KRTAP10-4P60372 401 aaPredicted RBP7.96□□□□□ -1.13
HCFC2-202ENST00000544223 FLG2Q5D862 2391 aaPredicted RBP7.95□□□□□ -1.14
HCFC2-202ENST00000544223 NOTCH2NLQ7Z3S9 236 aa7.94□□□□□ -1.14
HCFC2-202ENST00000544223 C20orf197Q8N268 126 aa7.93□□□□□ -1.14
HCFC2-202ENST00000544223 SNURFQ9Y675 71 aa7.93□□□□□ -1.14
HCFC2-202ENST00000544223 A8MWP4 228 aa7.92□□□□□ -1.14
HCFC2-202ENST00000544223 HCG22E2RYF7 251 aa7.92□□□□□ -1.14
HCFC2-202ENST00000544223 PRR15Q8IV56 129 aa7.92□□□□□ -1.14
HCFC2-202ENST00000544223 IGHV6-1A0A0B4J1U7 121 aa7.92□□□□□ -1.14
HCFC2-202ENST00000544223 TYMSOSQ8TAI1 123 aa7.91□□□□□ -1.14
HCFC2-202ENST00000544223 SSBP3-AS1Q7Z2R9 100 aa7.9□□□□□ -1.14
HCFC2-202ENST00000544223 OCR1Q9BZK8 76 aa7.9□□□□□ -1.15
HCFC2-202ENST00000544223 TRAV7A0A075B6U4 112 aa7.88□□□□□ -1.15
HCFC2-202ENST00000544223 FAM229BQ4G0N7 80 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms