RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 F8WEM9 126 aa12.08□□□□□ -0.47
COPS7A-218ENST00000543939 ZNF861PO60384 105 aa12.08□□□□□ -0.47
COPS7A-218ENST00000543939 RYR2Q92736 4967 aa12.08□□□□□ -0.48
COPS7A-218ENST00000543939 IGLV8-61A0A075B6I0 122 aa12.07□□□□□ -0.48
COPS7A-218ENST00000543939 A0A1B0GVY2 172 aa12.07□□□□□ -0.48
COPS7A-218ENST00000543939 HAMPP81172 84 aa12.06□□□□□ -0.48
COPS7A-218ENST00000543939 SRRM2Q9UQ35 2752 aaKnown RBP12.06□□□□□ -0.48
COPS7A-218ENST00000543939 IGLV7-43P04211 117 aa12.06□□□□□ -0.48
COPS7A-218ENST00000543939 SPRR4Q96PI1 79 aa12.06□□□□□ -0.48
COPS7A-218ENST00000543939 A0A1W2PNM2 257 aa12.04□□□□□ -0.48
COPS7A-218ENST00000543939 Q6JHZ5 121 aa12.04□□□□□ -0.48
COPS7A-218ENST00000543939 UBL5Q9BZL1 73 aa12.04□□□□□ -0.48
COPS7A-218ENST00000543939 TRBV7-7A0A0K0K1E9 115 aa12.03□□□□□ -0.48
COPS7A-218ENST00000543939 SCGB1A1P11684 91 aa12.03□□□□□ -0.48
COPS7A-218ENST00000543939 LINC00483Q53H64 154 aa12.02□□□□□ -0.49
COPS7A-218ENST00000543939 Q6Q795 121 aa12.02□□□□□ -0.49
COPS7A-218ENST00000543939 Q8NBF4 154 aa12.02□□□□□ -0.49
COPS7A-218ENST00000543939 ZNF706Q9Y5V0 76 aaPredicted RBP12.02□□□□□ -0.49
COPS7A-218ENST00000543939 IGFL1Q6UW32 110 aa12.01□□□□□ -0.49
COPS7A-218ENST00000543939 Q6ZVQ6 151 aa12□□□□□ -0.49
COPS7A-218ENST00000543939 A0A1B0GW54 56 aa12□□□□□ -0.49
COPS7A-218ENST00000543939 IMUPQ9GZP8 106 aa11.99□□□□□ -0.49
COPS7A-218ENST00000543939 KMT2CQ8NEZ4 4911 aaKnown RBP11.97□□□□□ -0.49
COPS7A-218ENST00000543939 IGKV3D-7A0A0C4DH55 119 aa11.97□□□□□ -0.49
COPS7A-218ENST00000543939 A0A0G2JQZ4 141 aa11.97□□□□□ -0.49
COPS7A-218ENST00000543939 ATP5EP2Q5VTU8 51 aa11.96□□□□□ -0.49
COPS7A-218ENST00000543939 PKHD1P08F94 4074 aa11.96□□□□□ -0.5
COPS7A-218ENST00000543939 CRYGAP11844 174 aa11.94□□□□□ -0.5
COPS7A-218ENST00000543939 LRP1BQ9NZR2 4599 aa11.93□□□□□ -0.5
COPS7A-218ENST00000543939 PCP4P48539 62 aa11.9□□□□□ -0.5
COPS7A-218ENST00000543939 NREPQ16612 68 aa11.9□□□□□ -0.5
COPS7A-218ENST00000543939 ANAPC11Q9NYG5 84 aa11.89□□□□□ -0.51
COPS7A-218ENST00000543939 DYNC1H1Q14204 4646 aaKnown RBP11.89□□□□□ -0.51
COPS7A-218ENST00000543939 IGLV9-49A0A0B4J1Y8 123 aa11.89□□□□□ -0.51
COPS7A-218ENST00000543939 CXCL6P80162 114 aa11.87□□□□□ -0.51
COPS7A-218ENST00000543939 C9orf153Q5TBE3 101 aa11.86□□□□□ -0.51
COPS7A-218ENST00000543939 RPL37AP61513 92 aaKnown RBP11.86□□□□□ -0.51
COPS7A-218ENST00000543939 A0A087WSZ3 146 aa11.82□□□□□ -0.52
COPS7A-218ENST00000543939 MOBPQ13875 183 aa11.82□□□□□ -0.52
COPS7A-218ENST00000543939 HIST1H4AP62805 103 aaKnown RBP11.81□□□□□ -0.52
COPS7A-218ENST00000543939 A0A087WVE0 104 aa11.8□□□□□ -0.52
COPS7A-218ENST00000543939 VPS13BQ7Z7G8 4022 aa11.8□□□□□ -0.52
COPS7A-218ENST00000543939 FAM236AA0A1B0GUQ0 79 aa11.8□□□□□ -0.52
COPS7A-218ENST00000543939 FAM236BA0A1B0GV22 79 aa11.8□□□□□ -0.52
COPS7A-218ENST00000543939 BPY2O14599 106 aa11.78□□□□□ -0.52
COPS7A-218ENST00000543939 APOBP04114 4563 aaKnown RBP11.75□□□□□ -0.53
COPS7A-218ENST00000543939 SMR3BP02814 79 aaPredicted RBP11.74□□□□□ -0.53
COPS7A-218ENST00000543939 FAM229BQ4G0N7 80 aa11.73□□□□□ -0.53
COPS7A-218ENST00000543939 KRTAP1-4P0C5Y4 121 aa11.72□□□□□ -0.53
COPS7A-218ENST00000543939 RYR3Q15413 4870 aa11.71□□□□□ -0.53
COPS7A-218ENST00000543939 SSBP3-AS1Q7Z2R9 100 aa11.71□□□□□ -0.54
COPS7A-218ENST00000543939 A0A087X002 238 aa11.7□□□□□ -0.54
COPS7A-218ENST00000543939 IGKV4-1P06312 121 aa11.7□□□□□ -0.54
COPS7A-218ENST00000543939 SPINK6Q6UWN8 80 aa11.7□□□□□ -0.54
COPS7A-218ENST00000543939 Q8N9L7 120 aa11.7□□□□□ -0.54
COPS7A-218ENST00000543939 ANAPC13Q9BS18 74 aa11.7□□□□□ -0.54
COPS7A-218ENST00000543939 HRCT1Q6UXD1 115 aa11.69□□□□□ -0.54
COPS7A-218ENST00000543939 DSCR10P59022 87 aa11.69□□□□□ -0.54
COPS7A-218ENST00000543939 KRTAP13-2Q52LG2 175 aa11.69□□□□□ -0.54
COPS7A-218ENST00000543939 KRTAP10-4P60372 401 aaPredicted RBP11.67□□□□□ -0.54
COPS7A-218ENST00000543939 LINC00472Q9H8W2 130 aa11.67□□□□□ -0.54
COPS7A-218ENST00000543939 DEFB116Q30KQ4 102 aa11.65□□□□□ -0.54
COPS7A-218ENST00000543939 CD164Q04900 197 aa11.64□□□□□ -0.55
COPS7A-218ENST00000543939 ATOX1O00244 68 aa11.63□□□□□ -0.55
COPS7A-218ENST00000543939 SS18L2Q9UHA2 77 aa11.63□□□□□ -0.55
COPS7A-218ENST00000543939 PLA2G1BP04054 148 aaKnown RBP11.61□□□□□ -0.55
COPS7A-218ENST00000543939 K7EQZ3 153 aa11.6□□□□□ -0.55
COPS7A-218ENST00000543939 Q96NJ1 140 aa11.6□□□□□ -0.55
COPS7A-218ENST00000543939 J3KT08 172 aa11.56□□□□□ -0.56
COPS7A-218ENST00000543939 FAT1Q14517 4588 aa11.56□□□□□ -0.56
COPS7A-218ENST00000543939 CDK2AP2O75956 126 aa11.55□□□□□ -0.56
COPS7A-218ENST00000543939 A8MWP4 228 aa11.54□□□□□ -0.56
COPS7A-218ENST00000543939 TYMSOSQ8TAI1 123 aa11.52□□□□□ -0.57
COPS7A-218ENST00000543939 PRR15Q8IV56 129 aa11.51□□□□□ -0.57
COPS7A-218ENST00000543939 FAM229AH3BQW9 127 aa11.49□□□□□ -0.57
COPS7A-218ENST00000543939 SERP2Q8N6R1 65 aa11.49□□□□□ -0.57
COPS7A-218ENST00000543939 ASB16-AS1Q495Z4 193 aa11.49□□□□□ -0.57
COPS7A-218ENST00000543939 PRR26Q8N8Z3 221 aa11.49□□□□□ -0.57
COPS7A-218ENST00000543939 CCDC179H3BU77 68 aa11.48□□□□□ -0.57
COPS7A-218ENST00000543939 COX7CP15954 63 aa11.48□□□□□ -0.57
COPS7A-218ENST00000543939 HCG22E2RYF7 251 aa11.47□□□□□ -0.57
COPS7A-218ENST00000543939 Q5XG85 94 aa11.47□□□□□ -0.57
COPS7A-218ENST00000543939 PKHD1L1Q86WI1 4243 aa11.47□□□□□ -0.57
COPS7A-218ENST00000543939 SMIM20Q8N5G0 67 aa11.46□□□□□ -0.58
COPS7A-218ENST00000543939 HSPG2P98160 4391 aa11.46□□□□□ -0.58
COPS7A-218ENST00000543939 NDUFB1O75438 58 aa11.45□□□□□ -0.58
COPS7A-218ENST00000543939 UQCRQO14949 82 aa11.44□□□□□ -0.58
COPS7A-218ENST00000543939 TRAV7A0A075B6U4 112 aa11.43□□□□□ -0.58
COPS7A-218ENST00000543939 Q5VSD8 79 aa11.42□□□□□ -0.58
COPS7A-218ENST00000543939 C4orf48Q5BLP8 95 aa11.41□□□□□ -0.58
COPS7A-218ENST00000543939 RYR1P21817 5038 aa11.41□□□□□ -0.58
COPS7A-218ENST00000543939 KRTAP29-1A8MX34 341 aaPredicted RBP11.4□□□□□ -0.58
COPS7A-218ENST00000543939 LIMD2Q9BT23 127 aa11.4□□□□□ -0.58
COPS7A-218ENST00000543939 A0A1B0GVX0 72 aa11.39□□□□□ -0.59
COPS7A-218ENST00000543939 SPINK1P00995 79 aa11.39□□□□□ -0.59
COPS7A-218ENST00000543939 WFDC13Q8IUB5 93 aa11.39□□□□□ -0.59
COPS7A-218ENST00000543939 OCR1Q9BZK8 76 aa11.39□□□□□ -0.59
COPS7A-218ENST00000543939 LINC00304Q8N9R0 145 aa11.38□□□□□ -0.59
COPS7A-218ENST00000543939 MMP24-AS1A0A0U1RRL7 71 aa11.38□□□□□ -0.59
COPS7A-218ENST00000543939 C1orf195Q5TG92 126 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms