RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 DNHD1Q96M86 4753 aa8.63□□□□□ -1.03
VPS33A-208ENST00000543633 H0Y9J4 135 aa8.63□□□□□ -1.03
VPS33A-208ENST00000543633 SPRR1BP22528 89 aa8.63□□□□□ -1.03
VPS33A-208ENST00000543633 A0A096LNI7 61 aa8.63□□□□□ -1.03
VPS33A-208ENST00000543633 H3BPC8 53 aa8.61□□□□□ -1.03
VPS33A-208ENST00000543633 MP68P56378 58 aa8.61□□□□□ -1.03
VPS33A-208ENST00000543633 Q1T7F1 81 aa8.61□□□□□ -1.03
VPS33A-208ENST00000543633 C14orf177Q52M58 125 aa8.61□□□□□ -1.03
VPS33A-208ENST00000543633 MPLKIPQ8TAP9 179 aa8.61□□□□□ -1.03
VPS33A-208ENST00000543633 PKIGQ9Y2B9 76 aa8.61□□□□□ -1.03
VPS33A-208ENST00000543633 A0A087WSZ3 146 aa8.6□□□□□ -1.03
VPS33A-208ENST00000543633 C1orf64Q8NEQ6 169 aa8.6□□□□□ -1.03
VPS33A-208ENST00000543633 HUWE1Q7Z6Z7 4374 aaKnown RBP8.6□□□□□ -1.03
VPS33A-208ENST00000543633 KRTAP29-1A8MX34 341 aaPredicted RBP8.59□□□□□ -1.03
VPS33A-208ENST00000543633 PRLHP81277 87 aa8.59□□□□□ -1.03
VPS33A-208ENST00000543633 KRTAP21-3Q3LHN1 58 aa8.59□□□□□ -1.03
VPS33A-208ENST00000543633 UBE2AP49459 152 aa8.59□□□□□ -1.03
VPS33A-208ENST00000543633 COL7A1Q02388 2944 aa8.59□□□□□ -1.03
VPS33A-208ENST00000543633 A0A1W2PNN7 141 aa8.58□□□□□ -1.04
VPS33A-208ENST00000543633 BRK1Q8WUW1 75 aa8.58□□□□□ -1.04
VPS33A-208ENST00000543633 TRAV22A0A0B4J277 110 aa8.56□□□□□ -1.04
VPS33A-208ENST00000543633 IGKV2-24A0A0C4DH68 120 aa8.56□□□□□ -1.04
VPS33A-208ENST00000543633 SPANXA2-OT1Q8N9U9 137 aa8.56□□□□□ -1.04
VPS33A-208ENST00000543633 WFDC13Q8IUB5 93 aa8.55□□□□□ -1.04
VPS33A-208ENST00000543633 PRR15Q8IV56 129 aa8.55□□□□□ -1.04
VPS33A-208ENST00000543633 DNAH9Q9NYC9 4486 aa8.54□□□□□ -1.04
VPS33A-208ENST00000543633 A0A0G2JQZ4 141 aa8.54□□□□□ -1.04
VPS33A-208ENST00000543633 A8MWP4 228 aa8.54□□□□□ -1.04
VPS33A-208ENST00000543633 CASC2Q6XLA1 102 aa8.53□□□□□ -1.04
VPS33A-208ENST00000543633 KRTAP1-5Q9BYS1 174 aa8.53□□□□□ -1.04
VPS33A-208ENST00000543633 V9GYY9 64 aa8.53□□□□□ -1.04
VPS33A-208ENST00000543633 LINC00472Q9H8W2 130 aa8.52□□□□□ -1.05
VPS33A-208ENST00000543633 DEFB116Q30KQ4 102 aa8.51□□□□□ -1.05
VPS33A-208ENST00000543633 B9D2Q9BPU9 175 aa8.51□□□□□ -1.05
VPS33A-208ENST00000543633 MEGF8Q7Z7M0 2845 aa8.51□□□□□ -1.05
VPS33A-208ENST00000543633 H0Y9P7 68 aa8.5□□□□□ -1.05
VPS33A-208ENST00000543633 LINC00208Q96KT6 92 aa8.49□□□□□ -1.05
VPS33A-208ENST00000543633 PHF5AQ7RTV0 110 aaKnown RBP8.49□□□□□ -1.05
VPS33A-208ENST00000543633 RPL37AP61513 92 aaKnown RBP8.48□□□□□ -1.05
VPS33A-208ENST00000543633 C9orf163Q8N9P6 203 aa8.48□□□□□ -1.05
VPS33A-208ENST00000543633 STAB2Q8WWQ8 2551 aa8.47□□□□□ -1.05
VPS33A-208ENST00000543633 PRKDCP78527 4128 aaKnown RBP8.47□□□□□ -1.05
VPS33A-208ENST00000543633 KRTAP11-1Q8IUC1 163 aa8.47□□□□□ -1.05
VPS33A-208ENST00000543633 UBE2DNLQ8IWF7 75 aa8.47□□□□□ -1.05
VPS33A-208ENST00000543633 KRTAP13-1Q8IUC0 172 aa8.46□□□□□ -1.06
VPS33A-208ENST00000543633 APLNQ9ULZ1 77 aa8.45□□□□□ -1.06
VPS33A-208ENST00000543633 MMP24-AS1A0A0U1RRL7 71 aa8.44□□□□□ -1.06
VPS33A-208ENST00000543633 CHTF8P0CG12 524 aa8.44□□□□□ -1.06
VPS33A-208ENST00000543633 C1orf195Q5TG92 126 aa8.43□□□□□ -1.06
VPS33A-208ENST00000543633 LRCOL1A6NCL2 159 aa8.42□□□□□ -1.06
VPS33A-208ENST00000543633 PRR4Q16378 134 aa8.42□□□□□ -1.06
VPS33A-208ENST00000543633 MOBPQ13875 183 aa8.41□□□□□ -1.06
VPS33A-208ENST00000543633 ASB16-AS1Q495Z4 193 aa8.41□□□□□ -1.06
VPS33A-208ENST00000543633 TP53AIP1Q9HCN2 124 aa8.4□□□□□ -1.06
VPS33A-208ENST00000543633 LIMD2Q9BT23 127 aa8.38□□□□□ -1.07
VPS33A-208ENST00000543633 LINC00483Q53H64 154 aa8.37□□□□□ -1.07
VPS33A-208ENST00000543633 IGLV7-46A0A075B6I9 117 aa8.36□□□□□ -1.07
VPS33A-208ENST00000543633 PSPHP1O15172 72 aa8.36□□□□□ -1.07
VPS33A-208ENST00000543633 Q96NJ1 140 aa8.36□□□□□ -1.07
VPS33A-208ENST00000543633 NBDYA0A0U1RRE5 68 aa8.35□□□□□ -1.07
VPS33A-208ENST00000543633 Q6ZRN7 208 aaPredicted RBP8.35□□□□□ -1.07
VPS33A-208ENST00000543633 ZNF706Q9Y5V0 76 aaPredicted RBP8.35□□□□□ -1.07
VPS33A-208ENST00000543633 CSMD3Q7Z407 3707 aa8.35□□□□□ -1.07
VPS33A-208ENST00000543633 FBN3Q75N90 2809 aa8.35□□□□□ -1.07
VPS33A-208ENST00000543633 SPACA4Q8TDM5 124 aa8.34□□□□□ -1.07
VPS33A-208ENST00000543633 A8MUN3 132 aa8.34□□□□□ -1.07
VPS33A-208ENST00000543633 Q8N9P0 234 aaPredicted RBP8.34□□□□□ -1.07
VPS33A-208ENST00000543633 DYNC2H1Q8NCM8 4307 aaKnown RBP8.33□□□□□ -1.08
VPS33A-208ENST00000543633 Q6ZR54 194 aa8.33□□□□□ -1.08
VPS33A-208ENST00000543633 Q5VV11 94 aa8.32□□□□□ -1.08
VPS33A-208ENST00000543633 C8orf17Q9NRJ1 99 aa8.32□□□□□ -1.08
VPS33A-208ENST00000543633 PANO1I0J062 215 aa8.3□□□□□ -1.08
VPS33A-208ENST00000543633 DNAH10Q8IVF4 4471 aa8.3□□□□□ -1.08
VPS33A-208ENST00000543633 NUPR2A6NF83 97 aa8.3□□□□□ -1.08
VPS33A-208ENST00000543633 DNAH7Q8WXX0 4024 aa8.29□□□□□ -1.08
VPS33A-208ENST00000543633 A0A1B0GVX0 72 aa8.29□□□□□ -1.08
VPS33A-208ENST00000543633 COA5Q86WW8 74 aa8.29□□□□□ -1.08
VPS33A-208ENST00000543633 LYSTQ99698 3801 aa8.28□□□□□ -1.08
VPS33A-208ENST00000543633 IGLV9-49A0A0B4J1Y8 123 aa8.28□□□□□ -1.08
VPS33A-208ENST00000543633 TENM2Q9NT68 2774 aa8.27□□□□□ -1.08
VPS33A-208ENST00000543633 LOC101927531A0A1B0GV80 90 aa8.27□□□□□ -1.09
VPS33A-208ENST00000543633 Q75L30 129 aa8.27□□□□□ -1.09
VPS33A-208ENST00000543633 WWC2-AS2Q96NR7 200 aa8.27□□□□□ -1.09
VPS33A-208ENST00000543633 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.26□□□□□ -1.09
VPS33A-208ENST00000543633 CDK2AP2O75956 126 aa8.25□□□□□ -1.09
VPS33A-208ENST00000543633 CD164Q04900 197 aa8.24□□□□□ -1.09
VPS33A-208ENST00000543633 PRR15LQ9BU68 103 aa8.24□□□□□ -1.09
VPS33A-208ENST00000543633 MRPL34Q9BQ48 92 aaKnown RBP8.24□□□□□ -1.09
VPS33A-208ENST00000543633 STARD9Q9P2P6 4700 aa8.24□□□□□ -1.09
VPS33A-208ENST00000543633 PLECQ15149 4684 aaKnown RBP8.23□□□□□ -1.09
VPS33A-208ENST00000543633 IGLV5-52A0A0A0MRZ9 124 aa8.23□□□□□ -1.09
VPS33A-208ENST00000543633 SEC61GP60059 68 aa8.22□□□□□ -1.09
VPS33A-208ENST00000543633 PMAIP1Q13794 54 aa8.22□□□□□ -1.09
VPS33A-208ENST00000543633 TGP01266 2768 aa8.22□□□□□ -1.09
VPS33A-208ENST00000543633 CHKB-CPT1BH3BT56 60 aa8.22□□□□□ -1.09
VPS33A-208ENST00000543633 A0A087WTM6 91 aa8.2□□□□□ -1.1
VPS33A-208ENST00000543633 IGHV6-1A0A0B4J1U7 121 aa8.2□□□□□ -1.1
VPS33A-208ENST00000543633 PCOTHQ58A44 107 aa8.2□□□□□ -1.1
VPS33A-208ENST00000543633 PLAC8Q9NZF1 115 aa8.2□□□□□ -1.1
VPS33A-208ENST00000543633 ZNF861PO60384 105 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 230.9 ms