RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 BPESC1Q9GZL8 116 aa2.15□□□□□ -2.07
SFSWAP-211ENST00000542813 LINC00846Q9NV44 126 aa2.15□□□□□ -2.07
SFSWAP-211ENST00000542813 ROS1P08922 2347 aa2.14□□□□□ -2.07
SFSWAP-211ENST00000542813 TRAV23DV6A0A075B6W5 121 aa2.14□□□□□ -2.07
SFSWAP-211ENST00000542813 A6NN06 94 aa2.14□□□□□ -2.07
SFSWAP-211ENST00000542813 PPP1R17O96001 155 aa2.14□□□□□ -2.07
SFSWAP-211ENST00000542813 IGLV6-57P01721 117 aa2.14□□□□□ -2.07
SFSWAP-211ENST00000542813 RNASE4P34096 147 aaKnown RBP2.14□□□□□ -2.07
SFSWAP-211ENST00000542813 RPL39P62891 51 aaKnown RBP2.14□□□□□ -2.07
SFSWAP-211ENST00000542813 PRB3Q04118 309 aaPredicted RBP2.14□□□□□ -2.07
SFSWAP-211ENST00000542813 C7orf65Q6ZTY9 151 aa2.14□□□□□ -2.07
SFSWAP-211ENST00000542813 Q8NDZ9 215 aa2.14□□□□□ -2.07
SFSWAP-211ENST00000542813 DYNC2H1Q8NCM8 4307 aaKnown RBP2.13□□□□□ -2.07
SFSWAP-211ENST00000542813 IGHV3-64A0A075B6Q5 118 aa2.13□□□□□ -2.07
SFSWAP-211ENST00000542813 hDV103S1A0JD37 113 aa2.13□□□□□ -2.07
SFSWAP-211ENST00000542813 ODF3BA8MYP8 253 aa2.13□□□□□ -2.07
SFSWAP-211ENST00000542813 CTSGP08311 255 aa2.13□□□□□ -2.07
SFSWAP-211ENST00000542813 FUSP35637 526 aaKnown RBP eCLIP2.13□□□□□ -2.07
SFSWAP-211ENST00000542813 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.13□□□□□ -2.07
SFSWAP-211ENST00000542813 SOSTDC1Q6X4U4 206 aa2.13□□□□□ -2.07
SFSWAP-211ENST00000542813 PSORS1C2Q9UIG4 136 aa2.13□□□□□ -2.07
SFSWAP-211ENST00000542813 TENM2Q9NT68 2774 aa2.13□□□□□ -2.07
SFSWAP-211ENST00000542813 DNAJC13O75165 2243 aa2.12□□□□□ -2.07
SFSWAP-211ENST00000542813 IGLV10-54A0A075B6I4 117 aa2.12□□□□□ -2.07
SFSWAP-211ENST00000542813 IGLV3-9A0A075B6K5 115 aa2.12□□□□□ -2.07
SFSWAP-211ENST00000542813 A0A096LNT2 108 aa2.12□□□□□ -2.07
SFSWAP-211ENST00000542813 TRBV7-4A0A0J9YYF1 115 aa2.12□□□□□ -2.07
SFSWAP-211ENST00000542813 CLPSL1A2RUU4 121 aa2.12□□□□□ -2.07
SFSWAP-211ENST00000542813 M0R1W7 72 aa2.12□□□□□ -2.07
SFSWAP-211ENST00000542813 MGPP08493 103 aa2.12□□□□□ -2.07
SFSWAP-211ENST00000542813 POLR2KP53803 58 aaKnown RBP2.12□□□□□ -2.07
SFSWAP-211ENST00000542813 KRTAP12-2P59991 146 aa2.12□□□□□ -2.07
SFSWAP-211ENST00000542813 KRTAP10-8P60410 259 aa2.12□□□□□ -2.07
SFSWAP-211ENST00000542813 SPANXN1Q5VSR9 72 aa2.12□□□□□ -2.07
SFSWAP-211ENST00000542813 LINC00269Q8N2A0 174 aa2.12□□□□□ -2.07
SFSWAP-211ENST00000542813 CYP4F30PQ9H0H9 118 aa2.12□□□□□ -2.07
SFSWAP-211ENST00000542813 STAB2Q8WWQ8 2551 aa2.11□□□□□ -2.07
SFSWAP-211ENST00000542813 CMYA5Q8N3K9 4069 aa2.11□□□□□ -2.07
SFSWAP-211ENST00000542813 MALRD1Q5VYJ5 2156 aa2.11□□□□□ -2.07
SFSWAP-211ENST00000542813 TRAV22A0A0B4J277 110 aa2.11□□□□□ -2.07
SFSWAP-211ENST00000542813 A0A1W2PNN7 141 aa2.11□□□□□ -2.07
SFSWAP-211ENST00000542813 RNASE3P12724 160 aaKnown RBP2.11□□□□□ -2.07
SFSWAP-211ENST00000542813 DEFB1P60022 68 aa2.11□□□□□ -2.07
SFSWAP-211ENST00000542813 ASB16-AS1Q495Z4 193 aa2.11□□□□□ -2.07
SFSWAP-211ENST00000542813 Q8N6K4 173 aa2.11□□□□□ -2.07
SFSWAP-211ENST00000542813 TMEM254Q8TBM7 123 aa2.11□□□□□ -2.07
SFSWAP-211ENST00000542813 UBL5Q9BZL1 73 aa2.11□□□□□ -2.07
SFSWAP-211ENST00000542813 SNURFQ9Y675 71 aa2.11□□□□□ -2.07
SFSWAP-211ENST00000542813 ARHGAP32A7KAX9 2087 aa2.11□□□□□ -2.07
SFSWAP-211ENST00000542813 MUC4Q99102 2169 aa2.1□□□□□ -2.07
SFSWAP-211ENST00000542813 SACSQ9NZJ4 4579 aa2.1□□□□□ -2.07
SFSWAP-211ENST00000542813 TRAV12-3A0A0B4J271 114 aa2.1□□□□□ -2.07
SFSWAP-211ENST00000542813 IGKV2-24A0A0C4DH68 120 aa2.1□□□□□ -2.07
SFSWAP-211ENST00000542813 TRBV6-5A0A0K0K1A5 114 aa2.1□□□□□ -2.07
SFSWAP-211ENST00000542813 JMJD7-PLA2G4BH0Y9G9 81 aa2.1□□□□□ -2.07
SFSWAP-211ENST00000542813 H0YGX0 51 aa2.1□□□□□ -2.07
SFSWAP-211ENST00000542813 ENHOQ6UWT2 76 aa2.1□□□□□ -2.07
SFSWAP-211ENST00000542813 DNAH1Q9P2D7 4330 aa2.1□□□□□ -2.07
SFSWAP-211ENST00000542813 UBR4Q5T4S7 5183 aa2.09□□□□□ -2.07
SFSWAP-211ENST00000542813 COL7A1Q02388 2944 aa2.09□□□□□ -2.07
SFSWAP-211ENST00000542813 C3orf84H3BNL1 204 aa2.09□□□□□ -2.07
SFSWAP-211ENST00000542813 LIMD2Q9BT23 127 aa2.09□□□□□ -2.07
SFSWAP-211ENST00000542813 C14orf132Q9NPU4 83 aa2.09□□□□□ -2.07
SFSWAP-211ENST00000542813 NDUFA12Q9UI09 145 aa2.09□□□□□ -2.07
SFSWAP-211ENST00000542813 CADP27708 2225 aa2.08□□□□□ -2.08
SFSWAP-211ENST00000542813 TRBV6-8A0A0A6YYG3 113 aa2.08□□□□□ -2.08
SFSWAP-211ENST00000542813 TRAV10A0A0B4J240 114 aa2.08□□□□□ -2.08
SFSWAP-211ENST00000542813 HCG22E2RYF7 251 aa2.08□□□□□ -2.08
SFSWAP-211ENST00000542813 M0QY20 66 aa2.08□□□□□ -2.08
SFSWAP-211ENST00000542813 NREPQ16612 68 aa2.08□□□□□ -2.08
SFSWAP-211ENST00000542813 Q5VV11 94 aa2.08□□□□□ -2.08
SFSWAP-211ENST00000542813 LINC00308Q8TCZ7 52 aa2.08□□□□□ -2.08
SFSWAP-211ENST00000542813 ZNF625Q96I27 306 aaPredicted RBP2.08□□□□□ -2.08
SFSWAP-211ENST00000542813 Q9BRP9 147 aa2.08□□□□□ -2.08
SFSWAP-211ENST00000542813 TRAV21A0A0B4J279 112 aa2.07□□□□□ -2.08
SFSWAP-211ENST00000542813 LCE6AA0A183 80 aa2.07□□□□□ -2.08
SFSWAP-211ENST00000542813 LOC101927531A0A1B0GV80 90 aa2.07□□□□□ -2.08
SFSWAP-211ENST00000542813 CHKB-CPT1BH3BT56 60 aa2.07□□□□□ -2.08
SFSWAP-211ENST00000542813 NDUFA1O15239 70 aa2.07□□□□□ -2.08
SFSWAP-211ENST00000542813 KRTAP5-8O75690 187 aa2.07□□□□□ -2.08
SFSWAP-211ENST00000542813 PRB2P02812 416 aaPredicted RBP2.07□□□□□ -2.08
SFSWAP-211ENST00000542813 KLK9Q2XQG4 91 aa2.07□□□□□ -2.08
SFSWAP-211ENST00000542813 LINC00304Q8N9R0 145 aa2.07□□□□□ -2.08
SFSWAP-211ENST00000542813 WFDC9Q8NEX5 89 aa2.07□□□□□ -2.08
SFSWAP-211ENST00000542813 SPTSSBQ8NFR3 76 aa2.07□□□□□ -2.08
SFSWAP-211ENST00000542813 C20orf166-AS1Q96NR2 134 aa2.07□□□□□ -2.08
SFSWAP-211ENST00000542813 CDC42SE1Q9NRR8 79 aa2.07□□□□□ -2.08
SFSWAP-211ENST00000542813 ORMDL1Q9P0S3 153 aa2.07□□□□□ -2.08
SFSWAP-211ENST00000542813 KAAG1Q9UBP8 84 aa2.07□□□□□ -2.08
SFSWAP-211ENST00000542813 KLK9Q9UKQ9 250 aa2.07□□□□□ -2.08
SFSWAP-211ENST00000542813 LENEPQ9Y5L5 61 aa2.07□□□□□ -2.08
SFSWAP-211ENST00000542813 ABCA13Q86UQ4 5058 aa2.07□□□□□ -2.08
SFSWAP-211ENST00000542813 CR1P17927 2039 aa2.07□□□□□ -2.08
SFSWAP-211ENST00000542813 LOC110117498A0A087WWA1 95 aa2.06□□□□□ -2.08
SFSWAP-211ENST00000542813 IGKV2-29A2NJV5 120 aaPredicted RBP2.06□□□□□ -2.08
SFSWAP-211ENST00000542813 PDE6GP18545 87 aa2.06□□□□□ -2.08
SFSWAP-211ENST00000542813 ELOF1P60002 83 aaKnown RBP2.06□□□□□ -2.08
SFSWAP-211ENST00000542813 COX6A2Q02221 97 aa2.06□□□□□ -2.08
SFSWAP-211ENST00000542813 C9orf116Q5BN46 136 aaPredicted RBP2.06□□□□□ -2.08
SFSWAP-211ENST00000542813 CDC42SE2Q9NRR3 84 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms