RNA–Protein interactions for RNA: ENST00000542714.5

CHFR-221, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 542 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-221ENST00000542714 ZNF706Q9Y5V0 76 aaPredicted RBP7.97□□□□□ -1.13
CHFR-221ENST00000542714 TRBV7-4A0A0J9YYF1 115 aa7.96□□□□□ -1.14
CHFR-221ENST00000542714 RBM3P98179 157 aaKnown RBP7.96□□□□□ -1.14
CHFR-221ENST00000542714 SRRM2Q9UQ35 2752 aaKnown RBP7.95□□□□□ -1.14
CHFR-221ENST00000542714 LOC110117498A0A087WWA1 95 aa7.95□□□□□ -1.14
CHFR-221ENST00000542714 ANAPC11Q9NYG5 84 aa7.95□□□□□ -1.14
CHFR-221ENST00000542714 VPS13BQ7Z7G8 4022 aa7.94□□□□□ -1.14
CHFR-221ENST00000542714 Q6ZQT0 140 aa7.94□□□□□ -1.14
CHFR-221ENST00000542714 FAT1Q14517 4588 aa7.93□□□□□ -1.14
CHFR-221ENST00000542714 IGLV8-61A0A075B6I0 122 aa7.93□□□□□ -1.14
CHFR-221ENST00000542714 K7ERU9 68 aa7.93□□□□□ -1.14
CHFR-221ENST00000542714 HSPG2P98160 4391 aa7.93□□□□□ -1.14
CHFR-221ENST00000542714 EPPK1P58107 5090 aaKnown RBP7.93□□□□□ -1.14
CHFR-221ENST00000542714 CCKP06307 115 aa7.92□□□□□ -1.14
CHFR-221ENST00000542714 KRTAP17-1Q9BYP8 105 aa7.92□□□□□ -1.14
CHFR-221ENST00000542714 F8WEM9 126 aa7.91□□□□□ -1.14
CHFR-221ENST00000542714 DSCR8Q96T75 97 aa7.91□□□□□ -1.14
CHFR-221ENST00000542714 RYR1P21817 5038 aa7.9□□□□□ -1.14
CHFR-221ENST00000542714 A0A0G2JQZ4 141 aa7.9□□□□□ -1.14
CHFR-221ENST00000542714 J3QR89 54 aa7.9□□□□□ -1.14
CHFR-221ENST00000542714 KRTAP1-4P0C5Y4 121 aa7.9□□□□□ -1.14
CHFR-221ENST00000542714 SPINK6Q6UWN8 80 aa7.9□□□□□ -1.14
CHFR-221ENST00000542714 PKHD1L1Q86WI1 4243 aa7.9□□□□□ -1.15
CHFR-221ENST00000542714 PDE6GP18545 87 aa7.89□□□□□ -1.15
CHFR-221ENST00000542714 IGFL1Q6UW32 110 aa7.89□□□□□ -1.15
CHFR-221ENST00000542714 IGLV9-49A0A0B4J1Y8 123 aa7.88□□□□□ -1.15
CHFR-221ENST00000542714 FAM240AA0A1B0GVK7 77 aa7.87□□□□□ -1.15
CHFR-221ENST00000542714 A0A1W2PNM2 257 aa7.87□□□□□ -1.15
CHFR-221ENST00000542714 Q5VSD8 79 aa7.86□□□□□ -1.15
CHFR-221ENST00000542714 A0A087X002 238 aa7.85□□□□□ -1.15
CHFR-221ENST00000542714 FAM229AH3BQW9 127 aa7.85□□□□□ -1.15
CHFR-221ENST00000542714 PLA2G1BP04054 148 aaKnown RBP7.85□□□□□ -1.15
CHFR-221ENST00000542714 MOBPQ13875 183 aa7.85□□□□□ -1.15
CHFR-221ENST00000542714 FAM229BQ4G0N7 80 aa7.85□□□□□ -1.15
CHFR-221ENST00000542714 C9orf153Q5TBE3 101 aa7.85□□□□□ -1.15
CHFR-221ENST00000542714 Q6JHZ5 121 aa7.85□□□□□ -1.15
CHFR-221ENST00000542714 VPS25Q9BRG1 176 aa7.85□□□□□ -1.15
CHFR-221ENST00000542714 KIAA1109Q2LD37 5005 aa7.84□□□□□ -1.15
CHFR-221ENST00000542714 KRTAP13-2Q52LG2 175 aa7.84□□□□□ -1.15
CHFR-221ENST00000542714 Q8NBF4 154 aa7.84□□□□□ -1.15
CHFR-221ENST00000542714 CDIP1Q9H305 208 aa7.84□□□□□ -1.15
CHFR-221ENST00000542714 ACYP1P07311 99 aa7.83□□□□□ -1.16
CHFR-221ENST00000542714 C21orf62-AS1Q17RA5 79 aa7.82□□□□□ -1.16
CHFR-221ENST00000542714 LINC00846Q9NV44 126 aa7.82□□□□□ -1.16
CHFR-221ENST00000542714 Q8N1X5 172 aa7.8□□□□□ -1.16
CHFR-221ENST00000542714 CRYGAP11844 174 aa7.79□□□□□ -1.16
CHFR-221ENST00000542714 Q6Q795 121 aa7.79□□□□□ -1.16
CHFR-221ENST00000542714 SSBP3-AS1Q7Z2R9 100 aa7.77□□□□□ -1.17
CHFR-221ENST00000542714 A0A1B0GW54 56 aa7.76□□□□□ -1.17
CHFR-221ENST00000542714 PRR26Q8N8Z3 221 aa7.76□□□□□ -1.17
CHFR-221ENST00000542714 TRBV7-7A0A0K0K1E9 115 aa7.74□□□□□ -1.17
CHFR-221ENST00000542714 HRCT1Q6UXD1 115 aa7.74□□□□□ -1.17
CHFR-221ENST00000542714 Q6ZVQ6 151 aa7.74□□□□□ -1.17
CHFR-221ENST00000542714 A0A087WSZ3 146 aa7.73□□□□□ -1.17
CHFR-221ENST00000542714 TYMSOSQ8TAI1 123 aa7.72□□□□□ -1.17
CHFR-221ENST00000542714 CD164Q04900 197 aa7.71□□□□□ -1.18
CHFR-221ENST00000542714 LINC00643Q86TS7 51 aa7.71□□□□□ -1.18
CHFR-221ENST00000542714 UBL5Q9BZL1 73 aa7.71□□□□□ -1.18
CHFR-221ENST00000542714 BIRC6Q9NR09 4857 aa7.7□□□□□ -1.18
CHFR-221ENST00000542714 MT-ATP8P03928 68 aa7.7□□□□□ -1.18
CHFR-221ENST00000542714 KRTAP3-3Q9BYR6 98 aa7.7□□□□□ -1.18
CHFR-221ENST00000542714 KRTAP3-2Q9BYR7 98 aa7.7□□□□□ -1.18
CHFR-221ENST00000542714 KRTAP4-5Q9BYR2 181 aa7.69□□□□□ -1.18
CHFR-221ENST00000542714 NREPQ16612 68 aa7.68□□□□□ -1.18
CHFR-221ENST00000542714 IGKV3D-7A0A0C4DH55 119 aa7.66□□□□□ -1.18
CHFR-221ENST00000542714 Q96NJ1 140 aa7.65□□□□□ -1.18
CHFR-221ENST00000542714 FAT3Q8TDW7 4589 aa7.64□□□□□ -1.19
CHFR-221ENST00000542714 KRTAP10-8P60410 259 aa7.64□□□□□ -1.19
CHFR-221ENST00000542714 ATP5EP2Q5VTU8 51 aa7.64□□□□□ -1.19
CHFR-221ENST00000542714 LINC00304Q8N9R0 145 aa7.64□□□□□ -1.19
CHFR-221ENST00000542714 SIGMAR1Q99720 223 aa7.64□□□□□ -1.19
CHFR-221ENST00000542714 LINC00472Q9H8W2 130 aa7.64□□□□□ -1.19
CHFR-221ENST00000542714 SS18L2Q9UHA2 77 aa7.63□□□□□ -1.19
CHFR-221ENST00000542714 Q5XG85 94 aa7.62□□□□□ -1.19
CHFR-221ENST00000542714 LRP1Q07954 4544 aaKnown RBP7.62□□□□□ -1.19
CHFR-221ENST00000542714 CXCL6P80162 114 aa7.61□□□□□ -1.19
CHFR-221ENST00000542714 DEFB116Q30KQ4 102 aa7.61□□□□□ -1.19
CHFR-221ENST00000542714 BPY2O14599 106 aa7.6□□□□□ -1.19
CHFR-221ENST00000542714 DSCR10P59022 87 aa7.6□□□□□ -1.19
CHFR-221ENST00000542714 ASB16-AS1Q495Z4 193 aa7.6□□□□□ -1.19
CHFR-221ENST00000542714 HERC2O95714 4834 aa7.6□□□□□ -1.19
CHFR-221ENST00000542714 TNXBP22105 4242 aa7.59□□□□□ -1.19
CHFR-221ENST00000542714 FLG2Q5D862 2391 aaPredicted RBP7.59□□□□□ -1.19
CHFR-221ENST00000542714 SPINK1P00995 79 aa7.59□□□□□ -1.19
CHFR-221ENST00000542714 C4orf48Q5BLP8 95 aa7.59□□□□□ -1.19
CHFR-221ENST00000542714 SPAG11AQ6PDA7 123 aa7.59□□□□□ -1.19
CHFR-221ENST00000542714 MT1HL1P0DM35 61 aa7.58□□□□□ -1.2
CHFR-221ENST00000542714 RPS29P62273 56 aaKnown RBP7.57□□□□□ -1.2
CHFR-221ENST00000542714 Q8N9L7 120 aa7.57□□□□□ -1.2
CHFR-221ENST00000542714 LIMD2Q9BT23 127 aa7.57□□□□□ -1.2
CHFR-221ENST00000542714 IGKV4-1P06312 121 aa7.56□□□□□ -1.2
CHFR-221ENST00000542714 C1orf195Q5TG92 126 aa7.55□□□□□ -1.2
CHFR-221ENST00000542714 IMUPQ9GZP8 106 aa7.55□□□□□ -1.2
CHFR-221ENST00000542714 A0A087WVE0 104 aa7.54□□□□□ -1.2
CHFR-221ENST00000542714 J3KT08 172 aa7.54□□□□□ -1.2
CHFR-221ENST00000542714 K7EQZ3 153 aa7.54□□□□□ -1.2
CHFR-221ENST00000542714 OXTP01178 125 aa7.53□□□□□ -1.2
CHFR-221ENST00000542714 HIST1H4AP62805 103 aaKnown RBP7.52□□□□□ -1.21
CHFR-221ENST00000542714 A8MWP4 228 aa7.51□□□□□ -1.21
CHFR-221ENST00000542714 KRTAP29-1A8MX34 341 aaPredicted RBP7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms