RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 OCR1Q9BZK8 76 aa3.32□□□□□ -1.88
ATPAF1-212ENST00000542495 SERP1Q9Y6X1 66 aa3.32□□□□□ -1.88
ATPAF1-212ENST00000542495 TENM3Q9P273 2699 aa3.32□□□□□ -1.88
ATPAF1-212ENST00000542495 HUWE1Q7Z6Z7 4374 aaKnown RBP3.31□□□□□ -1.88
ATPAF1-212ENST00000542495 ETDCA0A1B0GVM5 59 aa3.31□□□□□ -1.88
ATPAF1-212ENST00000542495 RPL37AP8A6NKH3 93 aa3.31□□□□□ -1.88
ATPAF1-212ENST00000542495 Q5XG85 94 aa3.31□□□□□ -1.88
ATPAF1-212ENST00000542495 Q8N9L7 120 aa3.31□□□□□ -1.88
ATPAF1-212ENST00000542495 Q8NBF4 154 aa3.31□□□□□ -1.88
ATPAF1-212ENST00000542495 SPRR4Q96PI1 79 aa3.31□□□□□ -1.88
ATPAF1-212ENST00000542495 SNURFQ9Y675 71 aa3.31□□□□□ -1.88
ATPAF1-212ENST00000542495 C3orf84H3BNL1 204 aa3.3□□□□□ -1.88
ATPAF1-212ENST00000542495 FUSP35637 526 aaKnown RBP eCLIP3.3□□□□□ -1.88
ATPAF1-212ENST00000542495 Q75L30 129 aa3.3□□□□□ -1.88
ATPAF1-212ENST00000542495 MRPL55Q7Z7F7 128 aaKnown RBP3.3□□□□□ -1.88
ATPAF1-212ENST00000542495 ST20-AS1Q8NBB2 130 aa3.3□□□□□ -1.88
ATPAF1-212ENST00000542495 A0A0U1RQV1 116 aa3.3□□□□□ -1.88
ATPAF1-212ENST00000542495 F8WEM9 126 aa3.3□□□□□ -1.88
ATPAF1-212ENST00000542495 KRTAP19-4Q3LI73 84 aa3.3□□□□□ -1.88
ATPAF1-212ENST00000542495 C1orf137Q5JT78 98 aa3.3□□□□□ -1.88
ATPAF1-212ENST00000542495 SMIM29Q86T20 159 aa3.3□□□□□ -1.88
ATPAF1-212ENST00000542495 TMEM254Q8TBM7 123 aa3.3□□□□□ -1.88
ATPAF1-212ENST00000542495 LCE6AA0A183 80 aa3.29□□□□□ -1.88
ATPAF1-212ENST00000542495 ATP5EP56381 51 aaPredicted RBP3.29□□□□□ -1.88
ATPAF1-212ENST00000542495 SEC61BP60468 96 aaKnown RBP3.29□□□□□ -1.88
ATPAF1-212ENST00000542495 C5orf47Q569G3 176 aa3.29□□□□□ -1.88
ATPAF1-212ENST00000542495 K7EIL1 84 aa3.28□□□□□ -1.88
ATPAF1-212ENST00000542495 CNBPP62633 177 aaKnown RBP3.28□□□□□ -1.88
ATPAF1-212ENST00000542495 REG3GQ6UW15 175 aa3.28□□□□□ -1.88
ATPAF1-212ENST00000542495 IGLV8-61A0A075B6I0 122 aa3.28□□□□□ -1.89
ATPAF1-212ENST00000542495 PRB2P02812 416 aaPredicted RBP3.28□□□□□ -1.89
ATPAF1-212ENST00000542495 DSCR10P59022 87 aa3.28□□□□□ -1.89
ATPAF1-212ENST00000542495 SEC61GP60059 68 aa3.28□□□□□ -1.89
ATPAF1-212ENST00000542495 C4orf26Q17RF5 130 aa3.28□□□□□ -1.89
ATPAF1-212ENST00000542495 C16orf90A8MZG2 172 aa3.27□□□□□ -1.89
ATPAF1-212ENST00000542495 UBE2BP63146 152 aa3.27□□□□□ -1.89
ATPAF1-212ENST00000542495 KRTAP1-5Q9BYS1 174 aa3.27□□□□□ -1.89
ATPAF1-212ENST00000542495 DYNC2H1Q8NCM8 4307 aaKnown RBP3.26□□□□□ -1.89
ATPAF1-212ENST00000542495 A0A096LNI7 61 aa3.26□□□□□ -1.89
ATPAF1-212ENST00000542495 SMIM26A0A096LP01 95 aa3.26□□□□□ -1.89
ATPAF1-212ENST00000542495 A0A1W2PNN7 141 aa3.26□□□□□ -1.89
ATPAF1-212ENST00000542495 IGFL1Q6UW32 110 aa3.25□□□□□ -1.89
ATPAF1-212ENST00000542495 KMT2CQ8NEZ4 4911 aaKnown RBP3.25□□□□□ -1.89
ATPAF1-212ENST00000542495 H0Y9J4 135 aa3.25□□□□□ -1.89
ATPAF1-212ENST00000542495 K7EQZ3 153 aa3.25□□□□□ -1.89
ATPAF1-212ENST00000542495 SPRR1BP22528 89 aa3.25□□□□□ -1.89
ATPAF1-212ENST00000542495 HRCT1Q6UXD1 115 aa3.25□□□□□ -1.89
ATPAF1-212ENST00000542495 FP248Q71RG6 208 aaPredicted RBP3.25□□□□□ -1.89
ATPAF1-212ENST00000542495 ZCCHC13Q8WW36 166 aaKnown RBP3.25□□□□□ -1.89
ATPAF1-212ENST00000542495 HIGD2AQ9BW72 106 aa3.25□□□□□ -1.89
ATPAF1-212ENST00000542495 PRLHP81277 87 aa3.23□□□□□ -1.89
ATPAF1-212ENST00000542495 KRTAP11-1Q8IUC1 163 aa3.23□□□□□ -1.89
ATPAF1-212ENST00000542495 APLNQ9ULZ1 77 aa3.23□□□□□ -1.89
ATPAF1-212ENST00000542495 DNAH10Q8IVF4 4471 aa3.23□□□□□ -1.89
ATPAF1-212ENST00000542495 DNAH9Q9NYC9 4486 aa3.23□□□□□ -1.89
ATPAF1-212ENST00000542495 IGKV2-24A0A0C4DH68 120 aa3.23□□□□□ -1.89
ATPAF1-212ENST00000542495 A0A0G2JQZ4 141 aa3.23□□□□□ -1.89
ATPAF1-212ENST00000542495 HCG22E2RYF7 251 aa3.23□□□□□ -1.89
ATPAF1-212ENST00000542495 PSCAO43653 123 aa3.23□□□□□ -1.89
ATPAF1-212ENST00000542495 C14orf177Q52M58 125 aa3.23□□□□□ -1.89
ATPAF1-212ENST00000542495 B9D2Q9BPU9 175 aa3.23□□□□□ -1.89
ATPAF1-212ENST00000542495 COL7A1Q02388 2944 aa3.22□□□□□ -1.89
ATPAF1-212ENST00000542495 RYR3Q15413 4870 aa3.21□□□□□ -1.89
ATPAF1-212ENST00000542495 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.21□□□□□ -1.9
ATPAF1-212ENST00000542495 A0A087WSZ3 146 aa3.21□□□□□ -1.9
ATPAF1-212ENST00000542495 LRCOL1A6NCL2 159 aa3.21□□□□□ -1.9
ATPAF1-212ENST00000542495 KRTAP29-1A8MX34 341 aaPredicted RBP3.21□□□□□ -1.9
ATPAF1-212ENST00000542495 KRTAP10-2P60368 255 aa3.21□□□□□ -1.9
ATPAF1-212ENST00000542495 PHF5AQ7RTV0 110 aaKnown RBP3.21□□□□□ -1.9
ATPAF1-212ENST00000542495 C9orf163Q8N9P6 203 aa3.21□□□□□ -1.9
ATPAF1-212ENST00000542495 MPLKIPQ8TAP9 179 aa3.21□□□□□ -1.9
ATPAF1-212ENST00000542495 LINC00474Q9P2X8 69 aa3.21□□□□□ -1.9
ATPAF1-212ENST00000542495 CHTF8P0CG12 524 aa3.2□□□□□ -1.9
ATPAF1-212ENST00000542495 UBE2AP49459 152 aa3.2□□□□□ -1.9
ATPAF1-212ENST00000542495 FAM229BQ4G0N7 80 aa3.2□□□□□ -1.9
ATPAF1-212ENST00000542495 KRTAP13-1Q8IUC0 172 aa3.2□□□□□ -1.9
ATPAF1-212ENST00000542495 PKIGQ9Y2B9 76 aa3.2□□□□□ -1.9
ATPAF1-212ENST00000542495 hDV103S1A0JD37 113 aa3.2□□□□□ -1.9
ATPAF1-212ENST00000542495 UBE2DNLQ8IWF7 75 aa3.2□□□□□ -1.9
ATPAF1-212ENST00000542495 LINC00472Q9H8W2 130 aa3.2□□□□□ -1.9
ATPAF1-212ENST00000542495 DEFB116Q30KQ4 102 aa3.19□□□□□ -1.9
ATPAF1-212ENST00000542495 Q6ZRN7 208 aaPredicted RBP3.19□□□□□ -1.9
ATPAF1-212ENST00000542495 PRR15Q8IV56 129 aa3.19□□□□□ -1.9
ATPAF1-212ENST00000542495 LYSTQ99698 3801 aa3.18□□□□□ -1.9
ATPAF1-212ENST00000542495 NBDYA0A0U1RRE5 68 aa3.18□□□□□ -1.9
ATPAF1-212ENST00000542495 LINC00336Q6ZUF6 198 aa3.18□□□□□ -1.9
ATPAF1-212ENST00000542495 CYP4F30PQ9H0H9 118 aa3.18□□□□□ -1.9
ATPAF1-212ENST00000542495 IGLV5-52A0A0A0MRZ9 124 aa3.17□□□□□ -1.9
ATPAF1-212ENST00000542495 A8MWP4 228 aa3.17□□□□□ -1.9
ATPAF1-212ENST00000542495 PANO1I0J062 215 aa3.17□□□□□ -1.9
ATPAF1-212ENST00000542495 RPL37AP61513 92 aaKnown RBP3.17□□□□□ -1.9
ATPAF1-212ENST00000542495 Q8N1X5 172 aa3.17□□□□□ -1.9
ATPAF1-212ENST00000542495 PRR26Q8N8Z3 221 aa3.17□□□□□ -1.9
ATPAF1-212ENST00000542495 H3BPC8 53 aa3.17□□□□□ -1.9
ATPAF1-212ENST00000542495 NDUFB1O75438 58 aa3.17□□□□□ -1.9
ATPAF1-212ENST00000542495 WFDC13Q8IUB5 93 aa3.17□□□□□ -1.9
ATPAF1-212ENST00000542495 C1orf64Q8NEQ6 169 aa3.17□□□□□ -1.9
ATPAF1-212ENST00000542495 PRO0628Q9UI54 55 aa3.17□□□□□ -1.9
ATPAF1-212ENST00000542495 TRAV22A0A0B4J277 110 aa3.16□□□□□ -1.9
ATPAF1-212ENST00000542495 MP68P56378 58 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms