RNA–Protein interactions for RNA: ENST00000540590.1

LMO3-223, Transcript of LIM domain only 3, humanhuman

TSL 4

Gene LMO3, Length 565 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-223ENST00000540590 HSPG2P98160 4391 aa7.58□□□□□ -1.2
LMO3-223ENST00000540590 H3BMG7 143 aa7.58□□□□□ -1.2
LMO3-223ENST00000540590 Q6ZQY7 126 aa7.58□□□□□ -1.2
LMO3-223ENST00000540590 Q8N1X5 172 aa7.58□□□□□ -1.2
LMO3-223ENST00000540590 IGLV5-48A0A075B6I7 105 aa7.57□□□□□ -1.2
LMO3-223ENST00000540590 ST20-AS1Q8NBB2 130 aa7.57□□□□□ -1.2
LMO3-223ENST00000540590 KRTAP17-1Q9BYP8 105 aa7.57□□□□□ -1.2
LMO3-223ENST00000540590 ORMDL1Q9P0S3 153 aa7.56□□□□□ -1.2
LMO3-223ENST00000540590 C9JAW5 83 aa7.55□□□□□ -1.2
LMO3-223ENST00000540590 TMEM256-PLSCR3K7ERE1 68 aa7.55□□□□□ -1.2
LMO3-223ENST00000540590 SPRR1BP22528 89 aa7.55□□□□□ -1.2
LMO3-223ENST00000540590 Q5VSD8 79 aa7.55□□□□□ -1.2
LMO3-223ENST00000540590 TEX49A0A1B0GTD5 131 aa7.54□□□□□ -1.2
LMO3-223ENST00000540590 LINC01547P58512 204 aaPredicted RBP7.54□□□□□ -1.2
LMO3-223ENST00000540590 MTURNQ8N3F0 131 aa7.54□□□□□ -1.2
LMO3-223ENST00000540590 RYR1P21817 5038 aa7.53□□□□□ -1.2
LMO3-223ENST00000540590 H3BT86 120 aa7.53□□□□□ -1.2
LMO3-223ENST00000540590 LINC00483Q53H64 154 aa7.53□□□□□ -1.2
LMO3-223ENST00000540590 DEFB105AQ8NG35 78 aa7.53□□□□□ -1.2
LMO3-223ENST00000540590 LINC01600Q96MT4 127 aa7.53□□□□□ -1.2
LMO3-223ENST00000540590 SPRR4Q96PI1 79 aa7.53□□□□□ -1.2
LMO3-223ENST00000540590 SRRM2Q9UQ35 2752 aaKnown RBP7.53□□□□□ -1.2
LMO3-223ENST00000540590 FAM229BQ4G0N7 80 aa7.52□□□□□ -1.21
LMO3-223ENST00000540590 KRTAP4-5Q9BYR2 181 aa7.52□□□□□ -1.21
LMO3-223ENST00000540590 FAT1Q14517 4588 aa7.51□□□□□ -1.21
LMO3-223ENST00000540590 BAALC-AS2P0C853 105 aa7.51□□□□□ -1.21
LMO3-223ENST00000540590 UBE2V1Q13404 147 aa7.51□□□□□ -1.21
LMO3-223ENST00000540590 GAGE2AQ6NT46 116 aa7.51□□□□□ -1.21
LMO3-223ENST00000540590 Q8N377 158 aa7.51□□□□□ -1.21
LMO3-223ENST00000540590 PRO0461Q9UI25 63 aa7.51□□□□□ -1.21
LMO3-223ENST00000540590 KIAA1109Q2LD37 5005 aa7.5□□□□□ -1.21
LMO3-223ENST00000540590 F8W1H4 67 aa7.5□□□□□ -1.21
LMO3-223ENST00000540590 C21orf62-AS1Q17RA5 79 aa7.5□□□□□ -1.21
LMO3-223ENST00000540590 KRTAP19-4Q3LI73 84 aa7.5□□□□□ -1.21
LMO3-223ENST00000540590 LAMTOR3Q9UHA4 124 aa7.48□□□□□ -1.21
LMO3-223ENST00000540590 SMIM29Q86T20 159 aa7.47□□□□□ -1.21
LMO3-223ENST00000540590 C3orf22Q8N5N4 141 aa7.47□□□□□ -1.21
LMO3-223ENST00000540590 ANKRD29Q8N6D5 301 aa7.47□□□□□ -1.21
LMO3-223ENST00000540590 ANAPC11Q9NYG5 84 aa7.47□□□□□ -1.21
LMO3-223ENST00000540590 F8WEM9 126 aa7.46□□□□□ -1.22
LMO3-223ENST00000540590 JMJD7-PLA2G4BH0Y9G9 81 aa7.46□□□□□ -1.22
LMO3-223ENST00000540590 KRTAP1-4P0C5Y4 121 aa7.46□□□□□ -1.22
LMO3-223ENST00000540590 BIRC6Q9NR09 4857 aa7.46□□□□□ -1.22
LMO3-223ENST00000540590 KRTAP9-7A8MTY7 169 aa7.45□□□□□ -1.22
LMO3-223ENST00000540590 NDUFV3P56181 108 aaKnown RBP7.45□□□□□ -1.22
LMO3-223ENST00000540590 PKHD1L1Q86WI1 4243 aa7.44□□□□□ -1.22
LMO3-223ENST00000540590 IGLV8-61A0A075B6I0 122 aa7.43□□□□□ -1.22
LMO3-223ENST00000540590 CRYGAP11844 174 aa7.43□□□□□ -1.22
LMO3-223ENST00000540590 PDE6GP18545 87 aa7.43□□□□□ -1.22
LMO3-223ENST00000540590 Q6JHZ5 121 aa7.43□□□□□ -1.22
LMO3-223ENST00000540590 A0A087X002 238 aa7.41□□□□□ -1.22
LMO3-223ENST00000540590 A0A1B0GV72 72 aa7.41□□□□□ -1.22
LMO3-223ENST00000540590 SSBP3-AS1Q7Z2R9 100 aa7.41□□□□□ -1.22
LMO3-223ENST00000540590 IGLV9-49A0A0B4J1Y8 123 aa7.4□□□□□ -1.22
LMO3-223ENST00000540590 RBM3P98179 157 aaKnown RBP7.4□□□□□ -1.22
LMO3-223ENST00000540590 LCE5AQ5TCM9 118 aa7.4□□□□□ -1.22
LMO3-223ENST00000540590 Q8NBF4 154 aa7.4□□□□□ -1.22
LMO3-223ENST00000540590 OBSCN-AS1Q96MR7 158 aa7.4□□□□□ -1.22
LMO3-223ENST00000540590 KRTAP13-2Q52LG2 175 aa7.39□□□□□ -1.23
LMO3-223ENST00000540590 TEN1Q86WV5 123 aa7.39□□□□□ -1.23
LMO3-223ENST00000540590 A0A1B0GW54 56 aa7.38□□□□□ -1.23
LMO3-223ENST00000540590 ETDBQ3ZM63 59 aa7.38□□□□□ -1.23
LMO3-223ENST00000540590 C9orf153Q5TBE3 101 aa7.38□□□□□ -1.23
LMO3-223ENST00000540590 DSCR8Q96T75 97 aa7.38□□□□□ -1.23
LMO3-223ENST00000540590 OXTP01178 125 aa7.37□□□□□ -1.23
LMO3-223ENST00000540590 MOBPQ13875 183 aa7.37□□□□□ -1.23
LMO3-223ENST00000540590 FLG2Q5D862 2391 aaPredicted RBP7.37□□□□□ -1.23
LMO3-223ENST00000540590 LOC110117498A0A087WWA1 95 aa7.36□□□□□ -1.23
LMO3-223ENST00000540590 PRR26Q8N8Z3 221 aa7.36□□□□□ -1.23
LMO3-223ENST00000540590 TRBV7-4A0A0J9YYF1 115 aa7.35□□□□□ -1.23
LMO3-223ENST00000540590 CD164Q04900 197 aa7.35□□□□□ -1.23
LMO3-223ENST00000540590 C14orf132Q9NPU4 83 aa7.35□□□□□ -1.23
LMO3-223ENST00000540590 A0A0G2JQZ4 141 aa7.34□□□□□ -1.23
LMO3-223ENST00000540590 Q6Q795 121 aa7.34□□□□□ -1.23
LMO3-223ENST00000540590 HERC2O95714 4834 aa7.33□□□□□ -1.24
LMO3-223ENST00000540590 SPAG11AQ6PDA7 123 aa7.33□□□□□ -1.24
LMO3-223ENST00000540590 IGFL1Q6UW32 110 aa7.33□□□□□ -1.24
LMO3-223ENST00000540590 TYMSOSQ8TAI1 123 aa7.33□□□□□ -1.24
LMO3-223ENST00000540590 RPS29P62273 56 aaKnown RBP7.31□□□□□ -1.24
LMO3-223ENST00000540590 Q6ZQT0 140 aa7.3□□□□□ -1.24
LMO3-223ENST00000540590 KRTAP29-1A8MX34 341 aaPredicted RBP7.29□□□□□ -1.24
LMO3-223ENST00000540590 KRTAP10-8P60410 259 aa7.29□□□□□ -1.24
LMO3-223ENST00000540590 A0A1W2PNM2 257 aa7.28□□□□□ -1.24
LMO3-223ENST00000540590 J3QR89 54 aa7.28□□□□□ -1.24
LMO3-223ENST00000540590 SPINK1P00995 79 aa7.28□□□□□ -1.24
LMO3-223ENST00000540590 CCKP06307 115 aa7.28□□□□□ -1.24
LMO3-223ENST00000540590 Q5XG85 94 aa7.27□□□□□ -1.25
LMO3-223ENST00000540590 LINC00304Q8N9R0 145 aa7.27□□□□□ -1.25
LMO3-223ENST00000540590 VPS25Q9BRG1 176 aa7.27□□□□□ -1.25
LMO3-223ENST00000540590 SS18L2Q9UHA2 77 aa7.27□□□□□ -1.25
LMO3-223ENST00000540590 HRCT1Q6UXD1 115 aa7.26□□□□□ -1.25
LMO3-223ENST00000540590 FAM240AA0A1B0GVK7 77 aa7.25□□□□□ -1.25
LMO3-223ENST00000540590 ACYP1P07311 99 aa7.25□□□□□ -1.25
LMO3-223ENST00000540590 MT1HL1P0DM35 61 aa7.25□□□□□ -1.25
LMO3-223ENST00000540590 LIMD2Q9BT23 127 aa7.25□□□□□ -1.25
LMO3-223ENST00000540590 FAT3Q8TDW7 4589 aa7.25□□□□□ -1.25
LMO3-223ENST00000540590 TRBV7-7A0A0K0K1E9 115 aa7.24□□□□□ -1.25
LMO3-223ENST00000540590 KRTAP9-3Q9BYQ3 159 aa7.23□□□□□ -1.25
LMO3-223ENST00000540590 MYCBP2O75592 4640 aa7.23□□□□□ -1.25
LMO3-223ENST00000540590 ASB16-AS1Q495Z4 193 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms