RNA–Protein interactions for RNA: ENST00000540539.5

CLIP1-214, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2 BASIC

Gene CLIP1, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-214ENST00000540539 XAGE1AQ9HD64 81 aa6.09□□□□□ -1.43
CLIP1-214ENST00000540539 NOP10Q9NPE3 64 aaKnown RBP6.09□□□□□ -1.43
CLIP1-214ENST00000540539 Q8N377 158 aa6.08□□□□□ -1.44
CLIP1-214ENST00000540539 DEFB105AQ8NG35 78 aa6.08□□□□□ -1.44
CLIP1-214ENST00000540539 IGLV7-46A0A075B6I9 117 aa6.08□□□□□ -1.44
CLIP1-214ENST00000540539 IGLV1-51P01701 117 aa6.08□□□□□ -1.44
CLIP1-214ENST00000540539 WFDC10BQ8IUB3 73 aa6.08□□□□□ -1.44
CLIP1-214ENST00000540539 Q8NBF4 154 aa6.08□□□□□ -1.44
CLIP1-214ENST00000540539 MAP6D1Q9H9H5 199 aa6.08□□□□□ -1.44
CLIP1-214ENST00000540539 IGLV10-54A0A075B6I4 117 aa6.07□□□□□ -1.44
CLIP1-214ENST00000540539 SLURP1P55000 103 aa6.07□□□□□ -1.44
CLIP1-214ENST00000540539 CSAG1Q6PB30 78 aa6.07□□□□□ -1.44
CLIP1-214ENST00000540539 CHCHD10Q8WYQ3 142 aaPredicted RBP6.07□□□□□ -1.44
CLIP1-214ENST00000540539 IGLV1-50A0A075B6I6 118 aa6.06□□□□□ -1.44
CLIP1-214ENST00000540539 A0A0J9YWU9 116 aa6.06□□□□□ -1.44
CLIP1-214ENST00000540539 A0A1B0GUV1 79 aa6.05□□□□□ -1.44
CLIP1-214ENST00000540539 C1orf137Q5JT78 98 aa6.05□□□□□ -1.44
CLIP1-214ENST00000540539 SPRR4Q96PI1 79 aa6.05□□□□□ -1.44
CLIP1-214ENST00000540539 Q6ZR54 194 aa6.05□□□□□ -1.44
CLIP1-214ENST00000540539 KRTAP29-1A8MX34 341 aaPredicted RBP6.04□□□□□ -1.44
CLIP1-214ENST00000540539 C7orf33Q8WU49 177 aa6.04□□□□□ -1.44
CLIP1-214ENST00000540539 TRRAPQ9Y4A5 3859 aa6.03□□□□□ -1.44
CLIP1-214ENST00000540539 A0A087X002 238 aa6.03□□□□□ -1.44
CLIP1-214ENST00000540539 C19orf73Q9NVV2 129 aa6.03□□□□□ -1.44
CLIP1-214ENST00000540539 PKD1L1Q8TDX9 2849 aa6.02□□□□□ -1.45
CLIP1-214ENST00000540539 C1orf134Q5TEV5 83 aa6.02□□□□□ -1.45
CLIP1-214ENST00000540539 IGLV5-37A0A075B6J1 123 aa6□□□□□ -1.45
CLIP1-214ENST00000540539 A0A0A0MQY5 61 aa6□□□□□ -1.45
CLIP1-214ENST00000540539 PCOTHQ58A44 107 aa6□□□□□ -1.45
CLIP1-214ENST00000540539 C6orf48Q9UBA6 75 aa6□□□□□ -1.45
CLIP1-214ENST00000540539 ANK2Q01484 3957 aa5.99□□□□□ -1.45
CLIP1-214ENST00000540539 GVQW2A0A096LPI5 108 aaPredicted RBP5.98□□□□□ -1.45
CLIP1-214ENST00000540539 HRES1P13985 223 aa5.98□□□□□ -1.45
CLIP1-214ENST00000540539 REG3AQ06141 175 aa5.98□□□□□ -1.45
CLIP1-214ENST00000540539 ANGP03950 147 aaKnown RBP5.97□□□□□ -1.45
CLIP1-214ENST00000540539 RPL37AP61513 92 aaKnown RBP5.97□□□□□ -1.45
CLIP1-214ENST00000540539 A0A096LPF7 62 aa5.96□□□□□ -1.46
CLIP1-214ENST00000540539 IGHV6-1A0A0B4J1U7 121 aa5.96□□□□□ -1.46
CLIP1-214ENST00000540539 C16orf74Q96GX8 76 aa5.96□□□□□ -1.46
CLIP1-214ENST00000540539 MGAM2Q2M2H8 2515 aa5.95□□□□□ -1.46
CLIP1-214ENST00000540539 ROMO1P60602 79 aa5.95□□□□□ -1.46
CLIP1-214ENST00000540539 KRTAP21-3Q3LHN1 58 aa5.95□□□□□ -1.46
CLIP1-214ENST00000540539 CSNK1G2-AS1Q8NCQ2 148 aa5.95□□□□□ -1.46
CLIP1-214ENST00000540539 NOTCH1P46531 2555 aa5.94□□□□□ -1.46
CLIP1-214ENST00000540539 NBEAL1Q6ZS30 2694 aa5.94□□□□□ -1.46
CLIP1-214ENST00000540539 CMYA5Q8N3K9 4069 aa5.94□□□□□ -1.46
CLIP1-214ENST00000540539 A0A0G2JQZ4 141 aa5.93□□□□□ -1.46
CLIP1-214ENST00000540539 A0A1W2PNN7 141 aa5.93□□□□□ -1.46
CLIP1-214ENST00000540539 GIG44P09565 113 aaPredicted RBP5.93□□□□□ -1.46
CLIP1-214ENST00000540539 SPATA8Q6RVD6 105 aa5.92□□□□□ -1.46
CLIP1-214ENST00000540539 DEFB130BP0DP73 79 aa5.89□□□□□ -1.47
CLIP1-214ENST00000540539 DEFB130AP0DP74 79 aa5.89□□□□□ -1.47
CLIP1-214ENST00000540539 DHRS4-AS1Q9P1J3 65 aa5.89□□□□□ -1.47
CLIP1-214ENST00000540539 A0A087WSZ3 146 aa5.89□□□□□ -1.47
CLIP1-214ENST00000540539 CMC4P56277 68 aaPredicted RBP5.89□□□□□ -1.47
CLIP1-214ENST00000540539 Q6ZRX8 168 aa5.89□□□□□ -1.47
CLIP1-214ENST00000540539 KRTAP10-11P60412 298 aa5.88□□□□□ -1.47
CLIP1-214ENST00000540539 EGFEM1PQ0D2K5 195 aa5.88□□□□□ -1.47
CLIP1-214ENST00000540539 DNHD1Q96M86 4753 aa5.88□□□□□ -1.47
CLIP1-214ENST00000540539 REG3GQ6UW15 175 aa5.87□□□□□ -1.47
CLIP1-214ENST00000540539 IGFL1Q6UW32 110 aa5.86□□□□□ -1.47
CLIP1-214ENST00000540539 LCE2BO14633 110 aa5.85□□□□□ -1.47
CLIP1-214ENST00000540539 CAMK2N2Q96S95 79 aa5.85□□□□□ -1.47
CLIP1-214ENST00000540539 NBEAL2Q6ZNJ1 2754 aa5.85□□□□□ -1.47
CLIP1-214ENST00000540539 IGKV2-24A0A0C4DH68 120 aa5.85□□□□□ -1.47
CLIP1-214ENST00000540539 A8MWP4 228 aa5.85□□□□□ -1.47
CLIP1-214ENST00000540539 DEFB131BA0A096LNP1 70 aa5.84□□□□□ -1.47
CLIP1-214ENST00000540539 MIR22HGQ0VDD5 57 aa5.84□□□□□ -1.47
CLIP1-214ENST00000540539 DNAH3Q8TD57 4116 aa5.84□□□□□ -1.47
CLIP1-214ENST00000540539 KRTAP4-16G5E9R7 235 aaPredicted RBP5.84□□□□□ -1.47
CLIP1-214ENST00000540539 ZNF861PO60384 105 aa5.84□□□□□ -1.47
CLIP1-214ENST00000540539 LCE2CQ5TA81 110 aa5.84□□□□□ -1.47
CLIP1-214ENST00000540539 PRO0255Q9UI72 69 aa5.83□□□□□ -1.48
CLIP1-214ENST00000540539 P0C880 135 aa5.83□□□□□ -1.48
CLIP1-214ENST00000540539 MMP24-AS1A0A0U1RRL7 71 aa5.82□□□□□ -1.48
CLIP1-214ENST00000540539 PRR34Q9NV39 138 aa5.82□□□□□ -1.48
CLIP1-214ENST00000540539 A0A1B0GU69 56 aa5.81□□□□□ -1.48
CLIP1-214ENST00000540539 RPL37AP8A6NKH3 93 aa5.81□□□□□ -1.48
CLIP1-214ENST00000540539 K7EIL1 84 aa5.79□□□□□ -1.48
CLIP1-214ENST00000540539 UQCR11O14957 56 aa5.79□□□□□ -1.48
CLIP1-214ENST00000540539 KRTAP25-1Q3LHN0 102 aa5.79□□□□□ -1.48
CLIP1-214ENST00000540539 SPRR1AP35321 89 aa5.78□□□□□ -1.48
CLIP1-214ENST00000540539 LINC00472Q9H8W2 130 aa5.78□□□□□ -1.48
CLIP1-214ENST00000540539 ALMS1Q8TCU4 4167 aa5.78□□□□□ -1.48
CLIP1-214ENST00000540539 LCE2AQ5TA79 106 aaPredicted RBP5.77□□□□□ -1.49
CLIP1-214ENST00000540539 TP53AIP1Q9HCN2 124 aa5.77□□□□□ -1.49
CLIP1-214ENST00000540539 DEFB135Q30KP9 77 aa5.77□□□□□ -1.49
CLIP1-214ENST00000540539 TENM2Q9NT68 2774 aa5.76□□□□□ -1.49
CLIP1-214ENST00000540539 MEGF8Q7Z7M0 2845 aa5.76□□□□□ -1.49
CLIP1-214ENST00000540539 TENM3Q9P273 2699 aa5.75□□□□□ -1.49
CLIP1-214ENST00000540539 C15orf56Q8N910 161 aa5.74□□□□□ -1.49
CLIP1-214ENST00000540539 IGLV8-61A0A075B6I0 122 aa5.74□□□□□ -1.49
CLIP1-214ENST00000540539 FAM168BA1KXE4 195 aa5.74□□□□□ -1.49
CLIP1-214ENST00000540539 COL7A1Q02388 2944 aa5.72□□□□□ -1.49
CLIP1-214ENST00000540539 ACYP2P14621 99 aa5.72□□□□□ -1.49
CLIP1-214ENST00000540539 LELP1Q5T871 98 aa5.72□□□□□ -1.49
CLIP1-214ENST00000540539 IGLV5-52A0A0A0MRZ9 124 aa5.71□□□□□ -1.5
CLIP1-214ENST00000540539 KRTAP26-1Q6PEX3 210 aa5.71□□□□□ -1.5
CLIP1-214ENST00000540539 A8MUU9 505 aa5.7□□□□□ -1.5
CLIP1-214ENST00000540539 LINC00483Q53H64 154 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms