RNA–Protein interactions for RNA: ENST00000540057.1

C2CD3-214, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 4

Gene C2CD3, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-214ENST00000540057 TRBV10-2A0A0K0K1G8 114 aa1.78□□□□□ -2.12
C2CD3-214ENST00000540057 ATP6V1G1O75348 118 aa1.78□□□□□ -2.12
C2CD3-214ENST00000540057 OCR1Q9BZK8 76 aa1.78□□□□□ -2.12
C2CD3-214ENST00000540057 NXT2Q9NPJ8 142 aaKnown RBP1.78□□□□□ -2.12
C2CD3-214ENST00000540057 ZNF73O43830 326 aaPredicted RBP1.77□□□□□ -2.13
C2CD3-214ENST00000540057 TAL2Q16559 108 aa1.77□□□□□ -2.13
C2CD3-214ENST00000540057 MEIG1Q5JSS6 88 aa1.77□□□□□ -2.13
C2CD3-214ENST00000540057 DEFB105AQ8NG35 78 aa1.77□□□□□ -2.13
C2CD3-214ENST00000540057 TEX49A0A1B0GTD5 131 aa1.76□□□□□ -2.13
C2CD3-214ENST00000540057 KRTAP5-8O75690 187 aa1.76□□□□□ -2.13
C2CD3-214ENST00000540057 SRP19P09132 144 aaKnown RBP1.76□□□□□ -2.13
C2CD3-214ENST00000540057 NDUFV3P56181 108 aaKnown RBP1.76□□□□□ -2.13
C2CD3-214ENST00000540057 ADIRFQ15847 76 aa1.76□□□□□ -2.13
C2CD3-214ENST00000540057 S100A7L2Q5SY68 101 aa1.76□□□□□ -2.13
C2CD3-214ENST00000540057 TMEM170BQ5T4T1 132 aa1.76□□□□□ -2.13
C2CD3-214ENST00000540057 FA2HQ7L5A8 372 aa1.76□□□□□ -2.13
C2CD3-214ENST00000540057 ATP5L2Q7Z4Y8 100 aa1.76□□□□□ -2.13
C2CD3-214ENST00000540057 SPANXB1Q9NS25 103 aaPredicted RBP1.76□□□□□ -2.13
C2CD3-214ENST00000540057 NDUFA13Q9P0J0 144 aa1.76□□□□□ -2.13
C2CD3-214ENST00000540057 LINC01549A6NIU2 74 aa1.75□□□□□ -2.13
C2CD3-214ENST00000540057 C11orf86A6NJI1 115 aa1.75□□□□□ -2.13
C2CD3-214ENST00000540057 HINT1P49773 126 aaPredicted RBP1.75□□□□□ -2.13
C2CD3-214ENST00000540057 NDUFA6P56556 154 aa1.75□□□□□ -2.13
C2CD3-214ENST00000540057 Q5VV11 94 aa1.75□□□□□ -2.13
C2CD3-214ENST00000540057 MTURNQ8N3F0 131 aa1.75□□□□□ -2.13
C2CD3-214ENST00000540057 DHRS4-AS1Q9P1J3 65 aa1.75□□□□□ -2.13
C2CD3-214ENST00000540057 LINC01546A6NGU7 62 aa1.74□□□□□ -2.13
C2CD3-214ENST00000540057 NDUFC2O95298 119 aa1.74□□□□□ -2.13
C2CD3-214ENST00000540057 HERV-K104P63124 156 aa1.74□□□□□ -2.13
C2CD3-214ENST00000540057 PP632Q6XCG6 107 aa1.74□□□□□ -2.13
C2CD3-214ENST00000540057 IGLV5-48A0A075B6I7 105 aa1.73□□□□□ -2.13
C2CD3-214ENST00000540057 TRBV7-7A0A0K0K1E9 115 aa1.73□□□□□ -2.13
C2CD3-214ENST00000540057 TMEM223A0PJW6 202 aa1.73□□□□□ -2.13
C2CD3-214ENST00000540057 LINC00587B1AMM8 73 aa1.73□□□□□ -2.13
C2CD3-214ENST00000540057 KRTAP19-8Q3LI54 63 aa1.73□□□□□ -2.13
C2CD3-214ENST00000540057 MAP1LC3CQ9BXW4 147 aa1.73□□□□□ -2.13
C2CD3-214ENST00000540057 NAT8Q9UHE5 227 aa1.73□□□□□ -2.13
C2CD3-214ENST00000540057 AHNAK2Q8IVF2 5795 aa1.72□□□□□ -2.13
C2CD3-214ENST00000540057 C9JQL5 133 aa1.72□□□□□ -2.13
C2CD3-214ENST00000540057 ELOF1P60002 83 aaKnown RBP1.72□□□□□ -2.13
C2CD3-214ENST00000540057 SOSTDC1Q6X4U4 206 aa1.72□□□□□ -2.13
C2CD3-214ENST00000540057 SLC51BQ86UW2 128 aa1.72□□□□□ -2.13
C2CD3-214ENST00000540057 A0A096LNJ9 63 aa1.71□□□□□ -2.14
C2CD3-214ENST00000540057 MYMXA0A1B0GTQ4 84 aa1.71□□□□□ -2.14
C2CD3-214ENST00000540057 HBDP02042 147 aa1.71□□□□□ -2.14
C2CD3-214ENST00000540057 COX7BP24311 80 aa1.71□□□□□ -2.14
C2CD3-214ENST00000540057 BAGE3Q86Y29 109 aa1.71□□□□□ -2.14
C2CD3-214ENST00000540057 MIEN1Q9BRT3 115 aa1.71□□□□□ -2.14
C2CD3-214ENST00000540057 CBY1Q9Y3M2 126 aa1.71□□□□□ -2.14
C2CD3-214ENST00000540057 A0A1W2PNM2 257 aa1.7□□□□□ -2.14
C2CD3-214ENST00000540057 LST1O00453 97 aa1.7□□□□□ -2.14
C2CD3-214ENST00000540057 COMMD7Q86VX2 200 aa1.7□□□□□ -2.14
C2CD3-214ENST00000540057 KRTAP8-1Q8IUC2 63 aa1.7□□□□□ -2.14
C2CD3-214ENST00000540057 TSPEAR-AS2P59090 65 aa1.69□□□□□ -2.14
C2CD3-214ENST00000540057 NPC2P61916 151 aa1.69□□□□□ -2.14
C2CD3-214ENST00000540057 RHEBQ15382 184 aa1.69□□□□□ -2.14
C2CD3-214ENST00000540057 OR13C6PQ8NH95 151 aa1.69□□□□□ -2.14
C2CD3-214ENST00000540057 CLEC2BQ92478 149 aa1.69□□□□□ -2.14
C2CD3-214ENST00000540057 SPRR2GQ9BYE4 73 aa1.69□□□□□ -2.14
C2CD3-214ENST00000540057 SMCO4Q9NRQ5 59 aa1.69□□□□□ -2.14
C2CD3-214ENST00000540057 A0A1B0GWB2 263 aa1.68□□□□□ -2.14
C2CD3-214ENST00000540057 SPINK7P58062 85 aa1.68□□□□□ -2.14
C2CD3-214ENST00000540057 PMCHL1Q16048 86 aa1.68□□□□□ -2.14
C2CD3-214ENST00000540057 Q6JHZ5 121 aa1.68□□□□□ -2.14
C2CD3-214ENST00000540057 KRTAP5-10Q6L8G5 202 aa1.68□□□□□ -2.14
C2CD3-214ENST00000540057 IMUPQ9GZP8 106 aa1.68□□□□□ -2.14
C2CD3-214ENST00000540057 HMCN1Q96RW7 5635 aa1.68□□□□□ -2.14
C2CD3-214ENST00000540057 COLCA2A8K830 154 aa1.67□□□□□ -2.14
C2CD3-214ENST00000540057 F8WEM9 126 aa1.67□□□□□ -2.14
C2CD3-214ENST00000540057 LINC00313P59037 77 aa1.67□□□□□ -2.14
C2CD3-214ENST00000540057 IFITM2Q01629 132 aa1.67□□□□□ -2.14
C2CD3-214ENST00000540057 WFDC13Q8IUB5 93 aa1.67□□□□□ -2.14
C2CD3-214ENST00000540057 TRAV12-1A0A0B4J245 112 aa1.66□□□□□ -2.14
C2CD3-214ENST00000540057 TRBV7-6A0A0J9YX20 115 aa1.66□□□□□ -2.14
C2CD3-214ENST00000540057 LEPROTO15243 131 aa1.66□□□□□ -2.14
C2CD3-214ENST00000540057 LINC00518Q8N0U6 118 aa1.66□□□□□ -2.14
C2CD3-214ENST00000540057 SPANXDQ9BXN6 97 aa1.66□□□□□ -2.14
C2CD3-214ENST00000540057 SPANXCQ9NY87 97 aa1.66□□□□□ -2.14
C2CD3-214ENST00000540057 TRAV13-2A0A0B4J235 113 aa1.65□□□□□ -2.15
C2CD3-214ENST00000540057 ZNF815PA8K554 130 aa1.65□□□□□ -2.15
C2CD3-214ENST00000540057 J3QQQ9 107 aa1.65□□□□□ -2.15
C2CD3-214ENST00000540057 LINC00614P0C842 121 aa1.65□□□□□ -2.15
C2CD3-214ENST00000540057 PEA15Q15121 130 aa1.65□□□□□ -2.15
C2CD3-214ENST00000540057 RGS21Q2M5E4 152 aa1.65□□□□□ -2.15
C2CD3-214ENST00000540057 OCIAD2Q56VL3 154 aa1.65□□□□□ -2.15
C2CD3-214ENST00000540057 KRTAP5-7Q6L8G8 165 aa1.65□□□□□ -2.15
C2CD3-214ENST00000540057 A0A0J9YXY3 114 aa1.64□□□□□ -2.15
C2CD3-214ENST00000540057 FAM236AA0A1B0GUQ0 79 aa1.64□□□□□ -2.15
C2CD3-214ENST00000540057 FAM236BA0A1B0GV22 79 aa1.64□□□□□ -2.15
C2CD3-214ENST00000540057 MT-ND4LP03901 98 aa1.64□□□□□ -2.15
C2CD3-214ENST00000540057 H1FX-AS1Q4G0G2 97 aa1.64□□□□□ -2.15
C2CD3-214ENST00000540057 TCTE3Q8IZS6 198 aa1.64□□□□□ -2.15
C2CD3-214ENST00000540057 SLC7A5P1Q8MH63 180 aa1.64□□□□□ -2.15
C2CD3-214ENST00000540057 LINC00308Q8TCZ7 52 aa1.64□□□□□ -2.15
C2CD3-214ENST00000540057 SS18L2Q9UHA2 77 aa1.64□□□□□ -2.15
C2CD3-214ENST00000540057 MUC19Q7Z5P9 8384 aa1.64□□□□□ -2.15
C2CD3-214ENST00000540057 NMUP48645 174 aa1.63□□□□□ -2.15
C2CD3-214ENST00000540057 Q6ZVQ6 151 aa1.63□□□□□ -2.15
C2CD3-214ENST00000540057 C18orf32Q8TCD1 76 aa1.63□□□□□ -2.15
C2CD3-214ENST00000540057 ZCCHC13Q8WW36 166 aaKnown RBP1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms