RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 DNAH8Q96JB1 4490 aa13.82□□□□□ -0.2
HOMER3-204ENST00000539827 ATOX1O00244 68 aa13.82□□□□□ -0.2
HOMER3-204ENST00000539827 PSORS1C2Q9UIG4 136 aa13.82□□□□□ -0.2
HOMER3-204ENST00000539827 SACSQ9NZJ4 4579 aa13.81□□□□□ -0.2
HOMER3-204ENST00000539827 FAT2Q9NYQ8 4349 aa13.8□□□□□ -0.2
HOMER3-204ENST00000539827 LCE6AA0A183 80 aa13.78□□□□□ -0.2
HOMER3-204ENST00000539827 KMT2CQ8NEZ4 4911 aaKnown RBP13.78□□□□□ -0.2
HOMER3-204ENST00000539827 KRTAP10-1P60331 282 aa13.78□□□□□ -0.2
HOMER3-204ENST00000539827 C1orf137Q5JT78 98 aa13.78□□□□□ -0.2
HOMER3-204ENST00000539827 F8WEM9 126 aa13.76□□□□□ -0.21
HOMER3-204ENST00000539827 PKD1P98161 4303 aa13.75□□□□□ -0.21
HOMER3-204ENST00000539827 CIRBP-AS1Q8TBR5 109 aa13.74□□□□□ -0.21
HOMER3-204ENST00000539827 UQCRQO14949 82 aa13.73□□□□□ -0.21
HOMER3-204ENST00000539827 Q6ZVQ6 151 aa13.73□□□□□ -0.21
HOMER3-204ENST00000539827 A0A1W2PNM2 257 aa13.72□□□□□ -0.21
HOMER3-204ENST00000539827 SPRR1BP22528 89 aa13.72□□□□□ -0.21
HOMER3-204ENST00000539827 HAMPP81172 84 aa13.72□□□□□ -0.21
HOMER3-204ENST00000539827 A0A0G2JQZ4 141 aa13.71□□□□□ -0.21
HOMER3-204ENST00000539827 SCXQ7RTU7 201 aa13.69□□□□□ -0.22
HOMER3-204ENST00000539827 Q6ZSA8 131 aa13.69□□□□□ -0.22
HOMER3-204ENST00000539827 COX7CP15954 63 aa13.68□□□□□ -0.22
HOMER3-204ENST00000539827 A0A087WVE0 104 aa13.67□□□□□ -0.22
HOMER3-204ENST00000539827 IGFL1Q6UW32 110 aa13.67□□□□□ -0.22
HOMER3-204ENST00000539827 Q8NBF4 154 aa13.67□□□□□ -0.22
HOMER3-204ENST00000539827 ZNF861PO60384 105 aa13.66□□□□□ -0.22
HOMER3-204ENST00000539827 IGLV8-61A0A075B6I0 122 aa13.65□□□□□ -0.22
HOMER3-204ENST00000539827 SPRR4Q96PI1 79 aa13.65□□□□□ -0.22
HOMER3-204ENST00000539827 C9orf153Q5TBE3 101 aa13.65□□□□□ -0.22
HOMER3-204ENST00000539827 CXCL6P80162 114 aa13.64□□□□□ -0.23
HOMER3-204ENST00000539827 SRRM2Q9UQ35 2752 aaKnown RBP13.64□□□□□ -0.23
HOMER3-204ENST00000539827 IGLV7-43P04211 117 aa13.62□□□□□ -0.23
HOMER3-204ENST00000539827 SERP2Q8N6R1 65 aa13.62□□□□□ -0.23
HOMER3-204ENST00000539827 SS18L2Q9UHA2 77 aa13.62□□□□□ -0.23
HOMER3-204ENST00000539827 NREPQ16612 68 aa13.61□□□□□ -0.23
HOMER3-204ENST00000539827 LINC00336Q6ZUF6 198 aa13.6□□□□□ -0.23
HOMER3-204ENST00000539827 ZNF706Q9Y5V0 76 aaPredicted RBP13.58□□□□□ -0.24
HOMER3-204ENST00000539827 A0A1B0GW54 56 aa13.56□□□□□ -0.24
HOMER3-204ENST00000539827 CRYGAP11844 174 aa13.56□□□□□ -0.24
HOMER3-204ENST00000539827 LINC00483Q53H64 154 aa13.56□□□□□ -0.24
HOMER3-204ENST00000539827 RYR3Q15413 4870 aa13.56□□□□□ -0.24
HOMER3-204ENST00000539827 IGLV9-49A0A0B4J1Y8 123 aa13.55□□□□□ -0.24
HOMER3-204ENST00000539827 ANAPC11Q9NYG5 84 aa13.55□□□□□ -0.24
HOMER3-204ENST00000539827 RYR2Q92736 4967 aa13.54□□□□□ -0.24
HOMER3-204ENST00000539827 A0A1B0GVY2 172 aa13.5□□□□□ -0.25
HOMER3-204ENST00000539827 SMIM20Q8N5G0 67 aa13.49□□□□□ -0.25
HOMER3-204ENST00000539827 LRP1BQ9NZR2 4599 aa13.49□□□□□ -0.25
HOMER3-204ENST00000539827 A0A087WSZ3 146 aa13.48□□□□□ -0.25
HOMER3-204ENST00000539827 BPY2O14599 106 aa13.47□□□□□ -0.25
HOMER3-204ENST00000539827 Q8N9L7 120 aa13.45□□□□□ -0.26
HOMER3-204ENST00000539827 MOBPQ13875 183 aa13.43□□□□□ -0.26
HOMER3-204ENST00000539827 DYNC1H1Q14204 4646 aaKnown RBP13.42□□□□□ -0.26
HOMER3-204ENST00000539827 TRAV7A0A075B6U4 112 aa13.41□□□□□ -0.26
HOMER3-204ENST00000539827 IGKV4-1P06312 121 aa13.38□□□□□ -0.27
HOMER3-204ENST00000539827 HRCT1Q6UXD1 115 aa13.38□□□□□ -0.27
HOMER3-204ENST00000539827 PKHD1P08F94 4074 aa13.38□□□□□ -0.27
HOMER3-204ENST00000539827 DEFB116Q30KQ4 102 aa13.38□□□□□ -0.27
HOMER3-204ENST00000539827 RPL37AP61513 92 aaKnown RBP13.37□□□□□ -0.27
HOMER3-204ENST00000539827 TMEM258P61165 79 aa13.35□□□□□ -0.27
HOMER3-204ENST00000539827 DSCR10P59022 87 aa13.34□□□□□ -0.27
HOMER3-204ENST00000539827 SMR3BP02814 79 aaPredicted RBP13.3□□□□□ -0.28
HOMER3-204ENST00000539827 K7EQZ3 153 aa13.27□□□□□ -0.28
HOMER3-204ENST00000539827 CYSTM1Q9H1C7 97 aa13.27□□□□□ -0.28
HOMER3-204ENST00000539827 C20orf197Q8N268 126 aa13.26□□□□□ -0.29
HOMER3-204ENST00000539827 LINC00472Q9H8W2 130 aa13.26□□□□□ -0.29
HOMER3-204ENST00000539827 VPS13BQ7Z7G8 4022 aa13.26□□□□□ -0.29
HOMER3-204ENST00000539827 A0A087X002 238 aa13.25□□□□□ -0.29
HOMER3-204ENST00000539827 APOBP04114 4563 aaKnown RBP13.22□□□□□ -0.29
HOMER3-204ENST00000539827 KRTAP13-2Q52LG2 175 aa13.22□□□□□ -0.29
HOMER3-204ENST00000539827 SSBP3-AS1Q7Z2R9 100 aa13.22□□□□□ -0.29
HOMER3-204ENST00000539827 KRTAP1-4P0C5Y4 121 aa13.21□□□□□ -0.29
HOMER3-204ENST00000539827 KLKP1Q107X0 134 aa13.21□□□□□ -0.29
HOMER3-204ENST00000539827 J3KT08 172 aa13.2□□□□□ -0.3
HOMER3-204ENST00000539827 FAM229BQ4G0N7 80 aa13.2□□□□□ -0.3
HOMER3-204ENST00000539827 Q96NJ1 140 aa13.18□□□□□ -0.3
HOMER3-204ENST00000539827 RPS28P62857 69 aaKnown RBP13.16□□□□□ -0.3
HOMER3-204ENST00000539827 SPINK6Q6UWN8 80 aa13.15□□□□□ -0.3
HOMER3-204ENST00000539827 NDUFC1O43677 76 aa13.13□□□□□ -0.31
HOMER3-204ENST00000539827 A8MWP4 228 aa13.12□□□□□ -0.31
HOMER3-204ENST00000539827 PLA2G1BP04054 148 aaKnown RBP13.12□□□□□ -0.31
HOMER3-204ENST00000539827 OCR1Q9BZK8 76 aa13.12□□□□□ -0.31
HOMER3-204ENST00000539827 CD164Q04900 197 aa13.12□□□□□ -0.31
HOMER3-204ENST00000539827 EPPK1P58107 5090 aaKnown RBP13.11□□□□□ -0.31
HOMER3-204ENST00000539827 PRR15Q8IV56 129 aa13.11□□□□□ -0.31
HOMER3-204ENST00000539827 HCG22E2RYF7 251 aa13.1□□□□□ -0.31
HOMER3-204ENST00000539827 H7BZZ5 65 aa13.09□□□□□ -0.31
HOMER3-204ENST00000539827 FAM236DA0A1B0GTK5 79 aa13.08□□□□□ -0.32
HOMER3-204ENST00000539827 FAM236CP0DP71 79 aa13.08□□□□□ -0.32
HOMER3-204ENST00000539827 KRTAP10-4P60372 401 aaPredicted RBP13.08□□□□□ -0.32
HOMER3-204ENST00000539827 WFDC13Q8IUB5 93 aa13.08□□□□□ -0.32
HOMER3-204ENST00000539827 TMEM254Q8TBM7 123 aa13.07□□□□□ -0.32
HOMER3-204ENST00000539827 FAT1Q14517 4588 aa13.07□□□□□ -0.32
HOMER3-204ENST00000539827 SNURFQ9Y675 71 aa13.06□□□□□ -0.32
HOMER3-204ENST00000539827 NDUFB1O75438 58 aa13.03□□□□□ -0.32
HOMER3-204ENST00000539827 TYMSOSQ8TAI1 123 aa13.03□□□□□ -0.32
HOMER3-204ENST00000539827 ATP5EP56381 51 aaPredicted RBP13.01□□□□□ -0.33
HOMER3-204ENST00000539827 PRR26Q8N8Z3 221 aa13□□□□□ -0.33
HOMER3-204ENST00000539827 A0A0U1RQV1 116 aa12.98□□□□□ -0.33
HOMER3-204ENST00000539827 KRTAP29-1A8MX34 341 aaPredicted RBP12.98□□□□□ -0.33
HOMER3-204ENST00000539827 CDK2AP2O75956 126 aa12.98□□□□□ -0.33
HOMER3-204ENST00000539827 CASC2Q6XLA1 102 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms