RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 NCR3O14931 201 aa9.64□□□□□ -0.87
DDB1-216ENST00000539739 PRR3P79522 188 aaKnown RBP9.64□□□□□ -0.87
DDB1-216ENST00000539739 LINC00528Q8N1L1 170 aa9.64□□□□□ -0.87
DDB1-216ENST00000539739 LINC00167Q96N53 147 aa9.64□□□□□ -0.87
DDB1-216ENST00000539739 C20orf197Q8N268 126 aa9.63□□□□□ -0.87
DDB1-216ENST00000539739 BIRC6Q9NR09 4857 aa9.62□□□□□ -0.87
DDB1-216ENST00000539739 A0A0U1RQV1 116 aa9.62□□□□□ -0.87
DDB1-216ENST00000539739 TRAV13-2A0A0B4J235 113 aa9.61□□□□□ -0.87
DDB1-216ENST00000539739 FAM229AH3BQW9 127 aa9.61□□□□□ -0.87
DDB1-216ENST00000539739 IGKV3D-7A0A0C4DH55 119 aa9.6□□□□□ -0.87
DDB1-216ENST00000539739 RPL37AP8A6NKH3 93 aa9.6□□□□□ -0.87
DDB1-216ENST00000539739 IGKV2-28A0A075B6P5 120 aa9.59□□□□□ -0.87
DDB1-216ENST00000539739 IGKV2D-28P01615 120 aa9.59□□□□□ -0.87
DDB1-216ENST00000539739 IGLV1-50A0A075B6I6 118 aa9.58□□□□□ -0.88
DDB1-216ENST00000539739 RPL37AP61513 92 aaKnown RBP9.58□□□□□ -0.88
DDB1-216ENST00000539739 RBM3P98179 157 aaKnown RBP9.58□□□□□ -0.88
DDB1-216ENST00000539739 HSPG2P98160 4391 aa9.57□□□□□ -0.88
DDB1-216ENST00000539739 LINC00846Q9NV44 126 aa9.57□□□□□ -0.88
DDB1-216ENST00000539739 PSORS1C2Q9UIG4 136 aa9.57□□□□□ -0.88
DDB1-216ENST00000539739 RYR1P21817 5038 aa9.57□□□□□ -0.88
DDB1-216ENST00000539739 KIAA1109Q2LD37 5005 aa9.57□□□□□ -0.88
DDB1-216ENST00000539739 PLA2G1BP04054 148 aaKnown RBP9.56□□□□□ -0.88
DDB1-216ENST00000539739 Q8N1X5 172 aa9.56□□□□□ -0.88
DDB1-216ENST00000539739 ERC2-IT1O76042 136 aa9.56□□□□□ -0.88
DDB1-216ENST00000539739 KRTAP11-1Q8IUC1 163 aa9.56□□□□□ -0.88
DDB1-216ENST00000539739 A0A087WVE0 104 aa9.55□□□□□ -0.88
DDB1-216ENST00000539739 H0YGX0 51 aa9.55□□□□□ -0.88
DDB1-216ENST00000539739 IGLV6-57P01721 117 aa9.55□□□□□ -0.88
DDB1-216ENST00000539739 RPL28P46779 137 aaKnown RBP9.55□□□□□ -0.88
DDB1-216ENST00000539739 Q5VSD8 79 aa9.55□□□□□ -0.88
DDB1-216ENST00000539739 LINC00337Q8N6G1 96 aa9.55□□□□□ -0.88
DDB1-216ENST00000539739 C1orf137Q5JT78 98 aa9.54□□□□□ -0.88
DDB1-216ENST00000539739 PRYO14603 147 aa9.53□□□□□ -0.88
DDB1-216ENST00000539739 KCNQ1DNQ9H478 68 aa9.53□□□□□ -0.88
DDB1-216ENST00000539739 REG3GQ6UW15 175 aa9.53□□□□□ -0.88
DDB1-216ENST00000539739 JMJD7-PLA2G4BH0Y9G9 81 aa9.52□□□□□ -0.89
DDB1-216ENST00000539739 TRAV23DV6A0A075B6W5 121 aa9.51□□□□□ -0.89
DDB1-216ENST00000539739 VPS13BQ7Z7G8 4022 aa9.49□□□□□ -0.89
DDB1-216ENST00000539739 F8WEM9 126 aa9.49□□□□□ -0.89
DDB1-216ENST00000539739 FAT1Q14517 4588 aa9.49□□□□□ -0.89
DDB1-216ENST00000539739 UBL5Q9BZL1 73 aa9.49□□□□□ -0.89
DDB1-216ENST00000539739 IGLV7-43P04211 117 aa9.48□□□□□ -0.89
DDB1-216ENST00000539739 ETDCA0A1B0GVM5 59 aa9.47□□□□□ -0.89
DDB1-216ENST00000539739 ZNF73O43830 326 aaPredicted RBP9.47□□□□□ -0.89
DDB1-216ENST00000539739 SPRR1AP35321 89 aa9.47□□□□□ -0.89
DDB1-216ENST00000539739 UBE2AP49459 152 aa9.47□□□□□ -0.89
DDB1-216ENST00000539739 KRTAP10-4P60372 401 aaPredicted RBP9.47□□□□□ -0.89
DDB1-216ENST00000539739 C4orf48Q5BLP8 95 aa9.47□□□□□ -0.89
DDB1-216ENST00000539739 KRTAP17-1Q9BYP8 105 aa9.47□□□□□ -0.89
DDB1-216ENST00000539739 C14orf132Q9NPU4 83 aa9.46□□□□□ -0.89
DDB1-216ENST00000539739 DIRC1Q969H9 104 aa9.45□□□□□ -0.9
DDB1-216ENST00000539739 ZNF861PO60384 105 aa9.44□□□□□ -0.9
DDB1-216ENST00000539739 Q1T7F1 81 aa9.44□□□□□ -0.9
DDB1-216ENST00000539739 KRTAP4-16G5E9R7 235 aaPredicted RBP9.43□□□□□ -0.9
DDB1-216ENST00000539739 SMIM11BQ8TCY0 68 aa9.43□□□□□ -0.9
DDB1-216ENST00000539739 PRLHP81277 87 aa9.42□□□□□ -0.9
DDB1-216ENST00000539739 C6orf99Q4VX62 202 aa9.42□□□□□ -0.9
DDB1-216ENST00000539739 H0Y9J4 135 aa9.42□□□□□ -0.9
DDB1-216ENST00000539739 SPINK6Q6UWN8 80 aa9.42□□□□□ -0.9
DDB1-216ENST00000539739 FAM218AQ96MZ4 157 aa9.42□□□□□ -0.9
DDB1-216ENST00000539739 SRRM2Q9UQ35 2752 aaKnown RBP9.4□□□□□ -0.9
DDB1-216ENST00000539739 CXCL6P80162 114 aa9.4□□□□□ -0.9
DDB1-216ENST00000539739 KRTAP13-1Q8IUC0 172 aa9.4□□□□□ -0.9
DDB1-216ENST00000539739 ORMDL1Q9P0S3 153 aa9.4□□□□□ -0.9
DDB1-216ENST00000539739 HERC2O95714 4834 aa9.39□□□□□ -0.91
DDB1-216ENST00000539739 TRBV7-4A0A0J9YYF1 115 aa9.39□□□□□ -0.91
DDB1-216ENST00000539739 NDUFS5O43920 106 aa9.39□□□□□ -0.91
DDB1-216ENST00000539739 COX7BP24311 80 aa9.39□□□□□ -0.91
DDB1-216ENST00000539739 Q6ZRX8 168 aa9.39□□□□□ -0.91
DDB1-216ENST00000539739 KTN1-AS1Q86SY8 53 aa9.39□□□□□ -0.91
DDB1-216ENST00000539739 HIGD2AQ9BW72 106 aa9.38□□□□□ -0.91
DDB1-216ENST00000539739 KRTAP4-5Q9BYR2 181 aa9.38□□□□□ -0.91
DDB1-216ENST00000539739 ELOF1P60002 83 aaKnown RBP9.37□□□□□ -0.91
DDB1-216ENST00000539739 DHRS4-AS1Q9P1J3 65 aa9.35□□□□□ -0.91
DDB1-216ENST00000539739 H3BQ85 93 aa9.34□□□□□ -0.91
DDB1-216ENST00000539739 TMEM256-PLSCR3K7ERE1 68 aa9.34□□□□□ -0.91
DDB1-216ENST00000539739 PDE6GP18545 87 aa9.34□□□□□ -0.91
DDB1-216ENST00000539739 MPLKIPQ8TAP9 179 aa9.34□□□□□ -0.91
DDB1-216ENST00000539739 Q9BRP9 147 aa9.34□□□□□ -0.91
DDB1-216ENST00000539739 TMEM254Q8TBM7 123 aa9.32□□□□□ -0.92
DDB1-216ENST00000539739 SNURFQ9Y675 71 aa9.32□□□□□ -0.92
DDB1-216ENST00000539739 ZNF706Q9Y5V0 76 aaPredicted RBP9.31□□□□□ -0.92
DDB1-216ENST00000539739 LOC110117498A0A087WWA1 95 aa9.3□□□□□ -0.92
DDB1-216ENST00000539739 RBM12B-AS1Q9P1G2 102 aa9.3□□□□□ -0.92
DDB1-216ENST00000539739 LINC00575Q6W349 94 aa9.29□□□□□ -0.92
DDB1-216ENST00000539739 Q6ZVQ6 151 aa9.28□□□□□ -0.92
DDB1-216ENST00000539739 FAM229BQ4G0N7 80 aa9.27□□□□□ -0.92
DDB1-216ENST00000539739 hDV103S1A0JD37 113 aa9.27□□□□□ -0.93
DDB1-216ENST00000539739 LINC01547P58512 204 aaPredicted RBP9.27□□□□□ -0.93
DDB1-216ENST00000539739 NREPQ16612 68 aa9.27□□□□□ -0.93
DDB1-216ENST00000539739 FLG2Q5D862 2391 aaPredicted RBP9.26□□□□□ -0.93
DDB1-216ENST00000539739 SPRR4Q96PI1 79 aa9.26□□□□□ -0.93
DDB1-216ENST00000539739 PKHD1L1Q86WI1 4243 aa9.25□□□□□ -0.93
DDB1-216ENST00000539739 KRTAP1-4P0C5Y4 121 aa9.23□□□□□ -0.93
DDB1-216ENST00000539739 ST20-AS1Q8NBB2 130 aa9.23□□□□□ -0.93
DDB1-216ENST00000539739 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.2□□□□□ -0.94
DDB1-216ENST00000539739 Q6ZQT0 140 aa9.2□□□□□ -0.94
DDB1-216ENST00000539739 DEFB105AQ8NG35 78 aa9.2□□□□□ -0.94
DDB1-216ENST00000539739 ANAPC11Q9NYG5 84 aa9.2□□□□□ -0.94
DDB1-216ENST00000539739 LINC00483Q53H64 154 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms