RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 RYR1P21817 5038 aa9.73□□□□□ -0.85
TRAF3-204ENST00000539721 SPINK6Q6UWN8 80 aa9.72□□□□□ -0.85
TRAF3-204ENST00000539721 SMIM29Q86T20 159 aa9.72□□□□□ -0.85
TRAF3-204ENST00000539721 FAT1Q14517 4588 aa9.71□□□□□ -0.85
TRAF3-204ENST00000539721 JMJD7-PLA2G4BH0Y9G9 81 aa9.71□□□□□ -0.85
TRAF3-204ENST00000539721 LINC00483Q53H64 154 aa9.71□□□□□ -0.85
TRAF3-204ENST00000539721 Q5VSD8 79 aa9.71□□□□□ -0.85
TRAF3-204ENST00000539721 F8WEM9 126 aa9.7□□□□□ -0.86
TRAF3-204ENST00000539721 OBSCN-AS1Q96MR7 158 aa9.69□□□□□ -0.86
TRAF3-204ENST00000539721 ANAPC11Q9NYG5 84 aa9.69□□□□□ -0.86
TRAF3-204ENST00000539721 RBM3P98179 157 aaKnown RBP9.68□□□□□ -0.86
TRAF3-204ENST00000539721 C14orf132Q9NPU4 83 aa9.67□□□□□ -0.86
TRAF3-204ENST00000539721 KIAA1109Q2LD37 5005 aa9.66□□□□□ -0.86
TRAF3-204ENST00000539721 IGLV9-49A0A0B4J1Y8 123 aa9.65□□□□□ -0.87
TRAF3-204ENST00000539721 Q8N1X5 172 aa9.65□□□□□ -0.87
TRAF3-204ENST00000539721 DSCR8Q96T75 97 aa9.65□□□□□ -0.87
TRAF3-204ENST00000539721 KRTAP1-4P0C5Y4 121 aa9.63□□□□□ -0.87
TRAF3-204ENST00000539721 C9orf153Q5TBE3 101 aa9.63□□□□□ -0.87
TRAF3-204ENST00000539721 KRTAP17-1Q9BYP8 105 aa9.63□□□□□ -0.87
TRAF3-204ENST00000539721 FAM229BQ4G0N7 80 aa9.62□□□□□ -0.87
TRAF3-204ENST00000539721 IGLV8-61A0A075B6I0 122 aa9.61□□□□□ -0.87
TRAF3-204ENST00000539721 TRBV7-4A0A0J9YYF1 115 aa9.61□□□□□ -0.87
TRAF3-204ENST00000539721 LOC110117498A0A087WWA1 95 aa9.6□□□□□ -0.87
TRAF3-204ENST00000539721 PKHD1L1Q86WI1 4243 aa9.6□□□□□ -0.87
TRAF3-204ENST00000539721 MOBPQ13875 183 aa9.6□□□□□ -0.87
TRAF3-204ENST00000539721 Q6ZQT0 140 aa9.59□□□□□ -0.87
TRAF3-204ENST00000539721 A0A087X002 238 aa9.58□□□□□ -0.88
TRAF3-204ENST00000539721 CRYGAP11844 174 aa9.58□□□□□ -0.88
TRAF3-204ENST00000539721 PDE6GP18545 87 aa9.58□□□□□ -0.88
TRAF3-204ENST00000539721 Q6JHZ5 121 aa9.58□□□□□ -0.88
TRAF3-204ENST00000539721 Q8NBF4 154 aa9.58□□□□□ -0.88
TRAF3-204ENST00000539721 IGFL1Q6UW32 110 aa9.58□□□□□ -0.88
TRAF3-204ENST00000539721 VPS25Q9BRG1 176 aa9.57□□□□□ -0.88
TRAF3-204ENST00000539721 A0A0G2JQZ4 141 aa9.56□□□□□ -0.88
TRAF3-204ENST00000539721 CCKP06307 115 aa9.56□□□□□ -0.88
TRAF3-204ENST00000539721 BIRC6Q9NR09 4857 aa9.56□□□□□ -0.88
TRAF3-204ENST00000539721 J3QR89 54 aa9.55□□□□□ -0.88
TRAF3-204ENST00000539721 KRTAP13-2Q52LG2 175 aa9.55□□□□□ -0.88
TRAF3-204ENST00000539721 C21orf62-AS1Q17RA5 79 aa9.53□□□□□ -0.88
TRAF3-204ENST00000539721 K7ERU9 68 aa9.52□□□□□ -0.88
TRAF3-204ENST00000539721 A0A1W2PNM2 257 aa9.52□□□□□ -0.89
TRAF3-204ENST00000539721 SSBP3-AS1Q7Z2R9 100 aa9.52□□□□□ -0.89
TRAF3-204ENST00000539721 PRR26Q8N8Z3 221 aa9.51□□□□□ -0.89
TRAF3-204ENST00000539721 TYMSOSQ8TAI1 123 aa9.5□□□□□ -0.89
TRAF3-204ENST00000539721 FAM240AA0A1B0GVK7 77 aa9.47□□□□□ -0.89
TRAF3-204ENST00000539721 HRCT1Q6UXD1 115 aa9.47□□□□□ -0.89
TRAF3-204ENST00000539721 ACYP1P07311 99 aa9.46□□□□□ -0.9
TRAF3-204ENST00000539721 Q6Q795 121 aa9.46□□□□□ -0.9
TRAF3-204ENST00000539721 KRTAP4-5Q9BYR2 181 aa9.45□□□□□ -0.9
TRAF3-204ENST00000539721 A0A1B0GW54 56 aa9.43□□□□□ -0.9
TRAF3-204ENST00000539721 LINC00846Q9NV44 126 aa9.42□□□□□ -0.9
TRAF3-204ENST00000539721 A0A087WSZ3 146 aa9.42□□□□□ -0.9
TRAF3-204ENST00000539721 TRBV7-7A0A0K0K1E9 115 aa9.42□□□□□ -0.9
TRAF3-204ENST00000539721 CD164Q04900 197 aa9.41□□□□□ -0.9
TRAF3-204ENST00000539721 C4orf48Q5BLP8 95 aa9.4□□□□□ -0.91
TRAF3-204ENST00000539721 LINC00304Q8N9R0 145 aa9.39□□□□□ -0.91
TRAF3-204ENST00000539721 HERC2O95714 4834 aa9.39□□□□□ -0.91
TRAF3-204ENST00000539721 UBL5Q9BZL1 73 aa9.37□□□□□ -0.91
TRAF3-204ENST00000539721 FLG2Q5D862 2391 aaPredicted RBP9.36□□□□□ -0.91
TRAF3-204ENST00000539721 KRTAP10-8P60410 259 aa9.35□□□□□ -0.91
TRAF3-204ENST00000539721 NREPQ16612 68 aa9.35□□□□□ -0.91
TRAF3-204ENST00000539721 FAT3Q8TDW7 4589 aa9.35□□□□□ -0.91
TRAF3-204ENST00000539721 LRP1Q07954 4544 aaKnown RBP9.35□□□□□ -0.91
TRAF3-204ENST00000539721 SPAG11AQ6PDA7 123 aa9.35□□□□□ -0.91
TRAF3-204ENST00000539721 Q6ZVQ6 151 aa9.35□□□□□ -0.91
TRAF3-204ENST00000539721 CDIP1Q9H305 208 aa9.35□□□□□ -0.91
TRAF3-204ENST00000539721 SS18L2Q9UHA2 77 aa9.35□□□□□ -0.91
TRAF3-204ENST00000539721 SPINK1P00995 79 aa9.33□□□□□ -0.92
TRAF3-204ENST00000539721 OXTP01178 125 aa9.32□□□□□ -0.92
TRAF3-204ENST00000539721 LIMD2Q9BT23 127 aa9.31□□□□□ -0.92
TRAF3-204ENST00000539721 TNXBP22105 4242 aa9.3□□□□□ -0.92
TRAF3-204ENST00000539721 RPS29P62273 56 aaKnown RBP9.28□□□□□ -0.92
TRAF3-204ENST00000539721 LINC00643Q86TS7 51 aa9.28□□□□□ -0.92
TRAF3-204ENST00000539721 MYCBP2O75592 4640 aa9.28□□□□□ -0.92
TRAF3-204ENST00000539721 MT1HL1P0DM35 61 aa9.27□□□□□ -0.92
TRAF3-204ENST00000539721 Q5XG85 94 aa9.27□□□□□ -0.92
TRAF3-204ENST00000539721 ABCA13Q86UQ4 5058 aa9.26□□□□□ -0.93
TRAF3-204ENST00000539721 KRTAP29-1A8MX34 341 aaPredicted RBP9.25□□□□□ -0.93
TRAF3-204ENST00000539721 DEFB116Q30KQ4 102 aa9.25□□□□□ -0.93
TRAF3-204ENST00000539721 ASB16-AS1Q495Z4 193 aa9.25□□□□□ -0.93
TRAF3-204ENST00000539721 LINC00472Q9H8W2 130 aa9.25□□□□□ -0.93
TRAF3-204ENST00000539721 BPY2O14599 106 aa9.24□□□□□ -0.93
TRAF3-204ENST00000539721 IGKV3D-7A0A0C4DH55 119 aa9.24□□□□□ -0.93
TRAF3-204ENST00000539721 Q96NJ1 140 aa9.24□□□□□ -0.93
TRAF3-204ENST00000539721 SIGMAR1Q99720 223 aa9.23□□□□□ -0.93
TRAF3-204ENST00000539721 ATP5EP2Q5VTU8 51 aa9.22□□□□□ -0.93
TRAF3-204ENST00000539721 IGKV4-1P06312 121 aa9.2□□□□□ -0.94
TRAF3-204ENST00000539721 CXCL6P80162 114 aa9.2□□□□□ -0.94
TRAF3-204ENST00000539721 J3KT08 172 aa9.19□□□□□ -0.94
TRAF3-204ENST00000539721 MT-ATP8P03928 68 aa9.19□□□□□ -0.94
TRAF3-204ENST00000539721 C1orf195Q5TG92 126 aa9.19□□□□□ -0.94
TRAF3-204ENST00000539721 DSCR10P59022 87 aa9.17□□□□□ -0.94
TRAF3-204ENST00000539721 J3QL48 77 aa9.16□□□□□ -0.94
TRAF3-204ENST00000539721 Q8N9L7 120 aa9.14□□□□□ -0.95
TRAF3-204ENST00000539721 A8MWP4 228 aa9.13□□□□□ -0.95
TRAF3-204ENST00000539721 HIST1H4AP62805 103 aaKnown RBP9.13□□□□□ -0.95
TRAF3-204ENST00000539721 RETNLBQ9BQ08 111 aa9.13□□□□□ -0.95
TRAF3-204ENST00000539721 K7EQZ3 153 aa9.12□□□□□ -0.95
TRAF3-204ENST00000539721 DMBT1Q9UGM3 2413 aaPredicted RBP9.12□□□□□ -0.95
TRAF3-204ENST00000539721 NDUFB1O75438 58 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms