RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 Q5XG85 94 aa8.83□□□□□ -1
UBE3B-210ENST00000539599 IGFL1Q6UW32 110 aa8.82□□□□□ -1
UBE3B-210ENST00000539599 BCE1O60756 84 aa8.82□□□□□ -1
UBE3B-210ENST00000539599 HRCT1Q6UXD1 115 aa8.82□□□□□ -1
UBE3B-210ENST00000539599 DNAH2Q9P225 4427 aa8.82□□□□□ -1
UBE3B-210ENST00000539599 C16orf90A8MZG2 172 aa8.81□□□□□ -1
UBE3B-210ENST00000539599 RPL37AP61513 92 aaKnown RBP8.8□□□□□ -1
UBE3B-210ENST00000539599 APLNQ9ULZ1 77 aa8.8□□□□□ -1
UBE3B-210ENST00000539599 MDFIQ99750 246 aa8.79□□□□□ -1
UBE3B-210ENST00000539599 A0A087WSZ3 146 aa8.79□□□□□ -1
UBE3B-210ENST00000539599 SPRR4Q96PI1 79 aa8.79□□□□□ -1
UBE3B-210ENST00000539599 EPM2AB3EWF7 344 aa8.78□□□□□ -1
UBE3B-210ENST00000539599 LINC00474Q9P2X8 69 aa8.77□□□□□ -1.01
UBE3B-210ENST00000539599 HECTD4Q9Y4D8 3996 aa8.76□□□□□ -1.01
UBE3B-210ENST00000539599 CNBPP62633 177 aaKnown RBP8.76□□□□□ -1.01
UBE3B-210ENST00000539599 VPS13DQ5THJ4 4388 aa8.75□□□□□ -1.01
UBE3B-210ENST00000539599 A0A0U1RQV1 116 aa8.75□□□□□ -1.01
UBE3B-210ENST00000539599 WFDC13Q8IUB5 93 aa8.75□□□□□ -1.01
UBE3B-210ENST00000539599 DNHD1Q96M86 4753 aa8.75□□□□□ -1.01
UBE3B-210ENST00000539599 TGP01266 2768 aa8.74□□□□□ -1.01
UBE3B-210ENST00000539599 UBE2AP49459 152 aa8.74□□□□□ -1.01
UBE3B-210ENST00000539599 FAM229BQ4G0N7 80 aa8.74□□□□□ -1.01
UBE3B-210ENST00000539599 DNAH8Q96JB1 4490 aa8.74□□□□□ -1.01
UBE3B-210ENST00000539599 SERP1Q9Y6X1 66 aa8.73□□□□□ -1.01
UBE3B-210ENST00000539599 FP248Q71RG6 208 aaPredicted RBP8.72□□□□□ -1.01
UBE3B-210ENST00000539599 DNAH17Q9UFH2 4485 aa8.71□□□□□ -1.01
UBE3B-210ENST00000539599 LRCOL1A6NCL2 159 aa8.71□□□□□ -1.01
UBE3B-210ENST00000539599 MEGF8Q7Z7M0 2845 aa8.71□□□□□ -1.02
UBE3B-210ENST00000539599 PRR4Q16378 134 aa8.7□□□□□ -1.02
UBE3B-210ENST00000539599 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.69□□□□□ -1.02
UBE3B-210ENST00000539599 NBDYA0A0U1RRE5 68 aa8.67□□□□□ -1.02
UBE3B-210ENST00000539599 C9orf163Q8N9P6 203 aa8.67□□□□□ -1.02
UBE3B-210ENST00000539599 HCG22E2RYF7 251 aa8.67□□□□□ -1.02
UBE3B-210ENST00000539599 FBN3Q75N90 2809 aa8.66□□□□□ -1.02
UBE3B-210ENST00000539599 NDUFC1O43677 76 aa8.66□□□□□ -1.02
UBE3B-210ENST00000539599 Q6ZRN7 208 aaPredicted RBP8.65□□□□□ -1.02
UBE3B-210ENST00000539599 MPLKIPQ8TAP9 179 aa8.65□□□□□ -1.02
UBE3B-210ENST00000539599 DNAH6Q9C0G6 4158 aa8.65□□□□□ -1.02
UBE3B-210ENST00000539599 C5orf47Q569G3 176 aa8.65□□□□□ -1.03
UBE3B-210ENST00000539599 IGLV9-49A0A0B4J1Y8 123 aa8.63□□□□□ -1.03
UBE3B-210ENST00000539599 A0A1B0GW54 56 aa8.63□□□□□ -1.03
UBE3B-210ENST00000539599 ANAPC11Q9NYG5 84 aa8.63□□□□□ -1.03
UBE3B-210ENST00000539599 B9D2Q9BPU9 175 aa8.63□□□□□ -1.03
UBE3B-210ENST00000539599 IGLV8-61A0A075B6I0 122 aa8.61□□□□□ -1.03
UBE3B-210ENST00000539599 C14orf177Q52M58 125 aa8.61□□□□□ -1.03
UBE3B-210ENST00000539599 LCE6AA0A183 80 aa8.59□□□□□ -1.03
UBE3B-210ENST00000539599 LINC00336Q6ZUF6 198 aa8.59□□□□□ -1.03
UBE3B-210ENST00000539599 SMIM26A0A096LP01 95 aa8.58□□□□□ -1.04
UBE3B-210ENST00000539599 ZCCHC13Q8WW36 166 aaKnown RBP8.57□□□□□ -1.04
UBE3B-210ENST00000539599 DNAH11Q96DT5 4516 aa8.57□□□□□ -1.04
UBE3B-210ENST00000539599 H0Y9J4 135 aa8.56□□□□□ -1.04
UBE3B-210ENST00000539599 KRTAP13-1Q8IUC0 172 aa8.56□□□□□ -1.04
UBE3B-210ENST00000539599 LINC00472Q9H8W2 130 aa8.56□□□□□ -1.04
UBE3B-210ENST00000539599 SPRR1BP22528 89 aa8.55□□□□□ -1.04
UBE3B-210ENST00000539599 SPACA4Q8TDM5 124 aa8.55□□□□□ -1.04
UBE3B-210ENST00000539599 LINC00208Q96KT6 92 aa8.55□□□□□ -1.04
UBE3B-210ENST00000539599 DNAH5Q8TE73 4624 aa8.55□□□□□ -1.04
UBE3B-210ENST00000539599 KRTAP29-1A8MX34 341 aaPredicted RBP8.54□□□□□ -1.04
UBE3B-210ENST00000539599 CASC2Q6XLA1 102 aa8.54□□□□□ -1.04
UBE3B-210ENST00000539599 C1orf64Q8NEQ6 169 aa8.54□□□□□ -1.04
UBE3B-210ENST00000539599 A0A087WTM6 91 aa8.53□□□□□ -1.04
UBE3B-210ENST00000539599 NUPR2A6NF83 97 aa8.53□□□□□ -1.04
UBE3B-210ENST00000539599 ATP5EP56381 51 aaPredicted RBP8.53□□□□□ -1.04
UBE3B-210ENST00000539599 PRR15Q8IV56 129 aa8.53□□□□□ -1.04
UBE3B-210ENST00000539599 ALMS1Q8TCU4 4167 aa8.53□□□□□ -1.04
UBE3B-210ENST00000539599 PSORS1C2Q9UIG4 136 aa8.51□□□□□ -1.05
UBE3B-210ENST00000539599 RTL8CO15255 209 aa8.5□□□□□ -1.05
UBE3B-210ENST00000539599 HYDINQ4G0P3 5121 aa8.5□□□□□ -1.05
UBE3B-210ENST00000539599 A8MWP4 228 aa8.5□□□□□ -1.05
UBE3B-210ENST00000539599 MOBPQ13875 183 aa8.5□□□□□ -1.05
UBE3B-210ENST00000539599 hDV103S1A0JD37 113 aa8.49□□□□□ -1.05
UBE3B-210ENST00000539599 H0Y9P7 68 aa8.49□□□□□ -1.05
UBE3B-210ENST00000539599 Q96NJ1 140 aa8.47□□□□□ -1.05
UBE3B-210ENST00000539599 MMP24-AS1A0A0U1RRL7 71 aa8.46□□□□□ -1.05
UBE3B-210ENST00000539599 TRAV22A0A0B4J277 110 aa8.45□□□□□ -1.06
UBE3B-210ENST00000539599 MP68P56378 58 aa8.45□□□□□ -1.06
UBE3B-210ENST00000539599 LRP1BQ9NZR2 4599 aa8.45□□□□□ -1.06
UBE3B-210ENST00000539599 A0A087X002 238 aa8.44□□□□□ -1.06
UBE3B-210ENST00000539599 NOTCH2NLQ7Z3S9 236 aa8.44□□□□□ -1.06
UBE3B-210ENST00000539599 BRK1Q8WUW1 75 aa8.44□□□□□ -1.06
UBE3B-210ENST00000539599 IGHV6-1A0A0B4J1U7 121 aa8.43□□□□□ -1.06
UBE3B-210ENST00000539599 WWC2-AS2Q96NR7 200 aa8.43□□□□□ -1.06
UBE3B-210ENST00000539599 IGLV5-52A0A0A0MRZ9 124 aa8.42□□□□□ -1.06
UBE3B-210ENST00000539599 PSPHP1O15172 72 aa8.41□□□□□ -1.06
UBE3B-210ENST00000539599 PCOTHQ58A44 107 aa8.4□□□□□ -1.06
UBE3B-210ENST00000539599 SPINK6Q6UWN8 80 aa8.39□□□□□ -1.07
UBE3B-210ENST00000539599 Q6ZR54 194 aa8.39□□□□□ -1.07
UBE3B-210ENST00000539599 LY6G6CO95867 125 aa8.39□□□□□ -1.07
UBE3B-210ENST00000539599 NDUFS5O43920 106 aa8.38□□□□□ -1.07
UBE3B-210ENST00000539599 LINC00483Q53H64 154 aa8.38□□□□□ -1.07
UBE3B-210ENST00000539599 NDUFB1O75438 58 aa8.37□□□□□ -1.07
UBE3B-210ENST00000539599 ZNF861PO60384 105 aa8.36□□□□□ -1.07
UBE3B-210ENST00000539599 C8orf17Q9NRJ1 99 aa8.35□□□□□ -1.07
UBE3B-210ENST00000539599 PLAC8Q9NZF1 115 aa8.35□□□□□ -1.07
UBE3B-210ENST00000539599 FAT2Q9NYQ8 4349 aa8.35□□□□□ -1.07
UBE3B-210ENST00000539599 PKIGQ9Y2B9 76 aa8.35□□□□□ -1.07
UBE3B-210ENST00000539599 CYP4F30PQ9H0H9 118 aa8.34□□□□□ -1.07
UBE3B-210ENST00000539599 KRTAP10-2P60368 255 aa8.34□□□□□ -1.07
UBE3B-210ENST00000539599 CIRBP-AS1Q8TBR5 109 aa8.34□□□□□ -1.07
UBE3B-210ENST00000539599 PKD1P98161 4303 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 130.5 ms