RNA–Protein interactions for RNA: ENST00000539492.1

CD4-209, Transcript of CD4 molecule, humanhuman

TSL 4

Gene CD4, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-209ENST00000539492 HIST1H2BKO60814 126 aa4.18□□□□□ -1.74
CD4-209ENST00000539492 HIST1H2BJP06899 126 aa4.18□□□□□ -1.74
CD4-209ENST00000539492 C3orf79P0CE67 100 aa4.18□□□□□ -1.74
CD4-209ENST00000539492 HIST1H2BOP23527 126 aa4.18□□□□□ -1.74
CD4-209ENST00000539492 HIST1H2BBP33778 126 aa4.18□□□□□ -1.74
CD4-209ENST00000539492 HIST1H2BDP58876 126 aa4.18□□□□□ -1.74
CD4-209ENST00000539492 HIST1H2BCP62807 126 aa4.18□□□□□ -1.74
CD4-209ENST00000539492 HIST2H2BEQ16778 126 aa4.18□□□□□ -1.74
CD4-209ENST00000539492 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.18□□□□□ -1.74
CD4-209ENST00000539492 IGFL1Q6UW32 110 aa4.18□□□□□ -1.74
CD4-209ENST00000539492 MUSTN1Q8IVN3 82 aa4.18□□□□□ -1.74
CD4-209ENST00000539492 HIST1H2BHQ93079 126 aa4.18□□□□□ -1.74
CD4-209ENST00000539492 HIST1H2BNQ99877 126 aa4.18□□□□□ -1.74
CD4-209ENST00000539492 HIST1H2BMQ99879 126 aa4.18□□□□□ -1.74
CD4-209ENST00000539492 C20orf202A1L168 122 aa4.17□□□□□ -1.74
CD4-209ENST00000539492 VAMP3Q15836 100 aa4.17□□□□□ -1.74
CD4-209ENST00000539492 ANKRD39Q53RE8 183 aa4.17□□□□□ -1.74
CD4-209ENST00000539492 Q6ZQY7 126 aa4.17□□□□□ -1.74
CD4-209ENST00000539492 KRTAP9-8Q9BYQ0 159 aa4.17□□□□□ -1.74
CD4-209ENST00000539492 hADV29S1A0JD25 119 aa4.16□□□□□ -1.74
CD4-209ENST00000539492 LINC00575Q6W349 94 aa4.16□□□□□ -1.74
CD4-209ENST00000539492 FCGBPQ9Y6R7 5405 aaPredicted RBP4.16□□□□□ -1.74
CD4-209ENST00000539492 LST1O00453 97 aa4.15□□□□□ -1.75
CD4-209ENST00000539492 S100A1P23297 94 aa4.15□□□□□ -1.75
CD4-209ENST00000539492 KRTDAPP60985 99 aa4.15□□□□□ -1.75
CD4-209ENST00000539492 OCIAD2Q56VL3 154 aa4.15□□□□□ -1.75
CD4-209ENST00000539492 Q96NJ1 140 aa4.15□□□□□ -1.75
CD4-209ENST00000539492 TRBV20-1A0A075B6N2 111 aa4.14□□□□□ -1.75
CD4-209ENST00000539492 S100A6P06703 90 aa4.14□□□□□ -1.75
CD4-209ENST00000539492 C20orf166-AS1Q96NR2 134 aa4.14□□□□□ -1.75
CD4-209ENST00000539492 A8MUU9 505 aa4.13□□□□□ -1.75
CD4-209ENST00000539492 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.13□□□□□ -1.75
CD4-209ENST00000539492 PPDPFLQ8WWR9 84 aa4.13□□□□□ -1.75
CD4-209ENST00000539492 SS18L2Q9UHA2 77 aa4.13□□□□□ -1.75
CD4-209ENST00000539492 SCGB1D1O95968 90 aa4.12□□□□□ -1.75
CD4-209ENST00000539492 COA6Q5JTJ3 125 aaKnown RBP4.12□□□□□ -1.75
CD4-209ENST00000539492 ATOH7Q8N100 152 aa4.12□□□□□ -1.75
CD4-209ENST00000539492 H3BUT2 72 aa4.11□□□□□ -1.75
CD4-209ENST00000539492 SNHG12Q9BXW3 62 aa4.11□□□□□ -1.75
CD4-209ENST00000539492 MT2AP02795 61 aa4.1□□□□□ -1.75
CD4-209ENST00000539492 SNRPEP62304 92 aaKnown RBP4.1□□□□□ -1.75
CD4-209ENST00000539492 BVES-AS1Q5T3Y7 98 aa4.09□□□□□ -1.75
CD4-209ENST00000539492 FAM236DA0A1B0GTK5 79 aa4.08□□□□□ -1.76
CD4-209ENST00000539492 FAM236CP0DP71 79 aa4.08□□□□□ -1.76
CD4-209ENST00000539492 TEN1Q86WV5 123 aa4.08□□□□□ -1.76
CD4-209ENST00000539492 KRTAP19-1Q8IUB9 90 aa4.08□□□□□ -1.76
CD4-209ENST00000539492 LCE2BO14633 110 aa4.07□□□□□ -1.76
CD4-209ENST00000539492 MT1FP04733 61 aa4.07□□□□□ -1.76
CD4-209ENST00000539492 A0A087WSZ3 146 aa4.06□□□□□ -1.76
CD4-209ENST00000539492 DSCR10P59022 87 aa4.06□□□□□ -1.76
CD4-209ENST00000539492 C12orf57Q99622 126 aa4.06□□□□□ -1.76
CD4-209ENST00000539492 KRTAP9-3Q9BYQ3 159 aa4.06□□□□□ -1.76
CD4-209ENST00000539492 HSBP1L1C9JCN9 74 aa4.05□□□□□ -1.76
CD4-209ENST00000539492 KRTAP10-10P60014 251 aa4.05□□□□□ -1.76
CD4-209ENST00000539492 RBM12B-AS1Q9P1G2 102 aa4.05□□□□□ -1.76
CD4-209ENST00000539492 KRTAP16-1A8MUX0 517 aa4.04□□□□□ -1.76
CD4-209ENST00000539492 SNCGO76070 127 aa4.04□□□□□ -1.76
CD4-209ENST00000539492 MPLKIPQ8TAP9 179 aa4.04□□□□□ -1.76
CD4-209ENST00000539492 SIGMAR1Q99720 223 aa4.04□□□□□ -1.76
CD4-209ENST00000539492 LOC105371267A0A1B0GV96 52 aa4.03□□□□□ -1.76
CD4-209ENST00000539492 HRES1P13985 223 aa4.03□□□□□ -1.76
CD4-209ENST00000539492 NDUFV3P56181 108 aaKnown RBP4.03□□□□□ -1.76
CD4-209ENST00000539492 LINC00313P59037 77 aa4.03□□□□□ -1.76
CD4-209ENST00000539492 HIST1H4GQ99525 98 aa4.02□□□□□ -1.77
CD4-209ENST00000539492 MACF1Q9UPN3 7388 aaKnown RBP4.01□□□□□ -1.77
CD4-209ENST00000539492 H0YGX0 51 aa4.01□□□□□ -1.77
CD4-209ENST00000539492 H3BMG7 143 aa4.01□□□□□ -1.77
CD4-209ENST00000539492 LINC00846Q9NV44 126 aa4.01□□□□□ -1.77
CD4-209ENST00000539492 GHRHP01286 108 aa4□□□□□ -1.77
CD4-209ENST00000539492 S100A2P29034 98 aa4□□□□□ -1.77
CD4-209ENST00000539492 FAM218AQ96MZ4 157 aa4□□□□□ -1.77
CD4-209ENST00000539492 SYNE2Q8WXH0 6885 aaKnown RBP4□□□□□ -1.77
CD4-209ENST00000539492 A0A1W2PNM2 257 aa3.99□□□□□ -1.77
CD4-209ENST00000539492 IGKV4-1P06312 121 aa3.99□□□□□ -1.77
CD4-209ENST00000539492 NOTCH2NLQ7Z3S9 236 aa3.99□□□□□ -1.77
CD4-209ENST00000539492 RAB37Q96AX2 223 aa3.99□□□□□ -1.77
CD4-209ENST00000539492 HIST1H2BLQ99880 126 aa3.99□□□□□ -1.77
CD4-209ENST00000539492 A0A0B4J2C4 111 aa3.98□□□□□ -1.77
CD4-209ENST00000539492 A0A1B0GX51 115 aa3.98□□□□□ -1.77
CD4-209ENST00000539492 FABP2P12104 132 aa3.98□□□□□ -1.77
CD4-209ENST00000539492 KRTAP19-6Q3LI70 58 aa3.98□□□□□ -1.77
CD4-209ENST00000539492 HIST3H2BBQ8N257 126 aa3.98□□□□□ -1.77
CD4-209ENST00000539492 COX8AP10176 69 aa3.97□□□□□ -1.77
CD4-209ENST00000539492 MTURNQ8N3F0 131 aa3.97□□□□□ -1.77
CD4-209ENST00000539492 TRBV7-4A0A0J9YYF1 115 aa3.96□□□□□ -1.78
CD4-209ENST00000539492 DLEU1O43261 78 aa3.96□□□□□ -1.78
CD4-209ENST00000539492 IGHV6-1A0A0B4J1U7 121 aa3.95□□□□□ -1.78
CD4-209ENST00000539492 ANKRD29Q8N6D5 301 aa3.95□□□□□ -1.78
CD4-209ENST00000539492 LINC00472Q9H8W2 130 aa3.95□□□□□ -1.78
CD4-209ENST00000539492 A8MWP4 228 aa3.93□□□□□ -1.78
CD4-209ENST00000539492 C8orf87E5RJ46 101 aa3.93□□□□□ -1.78
CD4-209ENST00000539492 H3BQ85 93 aa3.93□□□□□ -1.78
CD4-209ENST00000539492 DEFB116Q30KQ4 102 aa3.93□□□□□ -1.78
CD4-209ENST00000539492 HIGD1BQ9P298 99 aa3.93□□□□□ -1.78
CD4-209ENST00000539492 A0A1B0GV72 72 aa3.92□□□□□ -1.78
CD4-209ENST00000539492 DNAL4O96015 105 aa3.92□□□□□ -1.78
CD4-209ENST00000539492 TRACP01848 142 aa3.92□□□□□ -1.78
CD4-209ENST00000539492 CCKP06307 115 aa3.92□□□□□ -1.78
CD4-209ENST00000539492 ZCCHC13Q8WW36 166 aaKnown RBP3.92□□□□□ -1.78
CD4-209ENST00000539492 ORMDL1Q9P0S3 153 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms