RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 TCL1BO95988 128 aa10.29□□□□□ -0.76
TNFRSF1A-212ENST00000539372 COX8AP10176 69 aa10.29□□□□□ -0.76
TNFRSF1A-212ENST00000539372 TMA7Q9Y2S6 64 aaKnown RBP10.29□□□□□ -0.76
TNFRSF1A-212ENST00000539372 LCE2CQ5TA81 110 aa10.26□□□□□ -0.77
TNFRSF1A-212ENST00000539372 Q6JHZ5 121 aa10.25□□□□□ -0.77
TNFRSF1A-212ENST00000539372 IGFL1Q6UW32 110 aa10.25□□□□□ -0.77
TNFRSF1A-212ENST00000539372 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.25□□□□□ -0.77
TNFRSF1A-212ENST00000539372 OCIAD2Q56VL3 154 aa10.24□□□□□ -0.77
TNFRSF1A-212ENST00000539372 BVES-AS1Q5T3Y7 98 aa10.24□□□□□ -0.77
TNFRSF1A-212ENST00000539372 CLEC2BQ92478 149 aa10.24□□□□□ -0.77
TNFRSF1A-212ENST00000539372 DLEU1O43261 78 aa10.23□□□□□ -0.77
TNFRSF1A-212ENST00000539372 KRTAP19-2Q3LHN2 52 aa10.23□□□□□ -0.77
TNFRSF1A-212ENST00000539372 C14orf144Q96I85 54 aa10.23□□□□□ -0.77
TNFRSF1A-212ENST00000539372 TRBV7-7A0A0K0K1E9 115 aa10.22□□□□□ -0.77
TNFRSF1A-212ENST00000539372 VAMP8Q9BV40 100 aa10.22□□□□□ -0.77
TNFRSF1A-212ENST00000539372 RPL37P61927 97 aaKnown RBP10.21□□□□□ -0.77
TNFRSF1A-212ENST00000539372 SPATA45Q537H7 98 aa10.21□□□□□ -0.77
TNFRSF1A-212ENST00000539372 CFC1BP0CG36 223 aa10.2□□□□□ -0.78
TNFRSF1A-212ENST00000539372 CFC1P0CG37 223 aa10.2□□□□□ -0.78
TNFRSF1A-212ENST00000539372 SNHG12Q9BXW3 62 aa10.2□□□□□ -0.78
TNFRSF1A-212ENST00000539372 PAM16Q9Y3D7 125 aa10.2□□□□□ -0.78
TNFRSF1A-212ENST00000539372 PYY3Q5JQD4 70 aa10.19□□□□□ -0.78
TNFRSF1A-212ENST00000539372 RAB37Q96AX2 223 aa10.19□□□□□ -0.78
TNFRSF1A-212ENST00000539372 H3BUT2 72 aa10.18□□□□□ -0.78
TNFRSF1A-212ENST00000539372 PPDPFLQ8WWR9 84 aa10.18□□□□□ -0.78
TNFRSF1A-212ENST00000539372 HIGD1BQ9P298 99 aa10.16□□□□□ -0.78
TNFRSF1A-212ENST00000539372 MT1HP80294 61 aa10.15□□□□□ -0.78
TNFRSF1A-212ENST00000539372 C2orf91Q6ZV80 131 aa10.14□□□□□ -0.79
TNFRSF1A-212ENST00000539372 A0A0B4J2C4 111 aa10.13□□□□□ -0.79
TNFRSF1A-212ENST00000539372 KRTAP9-6A0A140TA67 174 aa10.13□□□□□ -0.79
TNFRSF1A-212ENST00000539372 FAM218AQ96MZ4 157 aa10.13□□□□□ -0.79
TNFRSF1A-212ENST00000539372 H0YGX0 51 aa10.1□□□□□ -0.79
TNFRSF1A-212ENST00000539372 SNCGO76070 127 aa10.1□□□□□ -0.79
TNFRSF1A-212ENST00000539372 OBSCN-AS1Q96MR7 158 aa10.1□□□□□ -0.79
TNFRSF1A-212ENST00000539372 CEND1Q8N111 149 aa10.09□□□□□ -0.79
TNFRSF1A-212ENST00000539372 LST1O00453 97 aa10.08□□□□□ -0.8
TNFRSF1A-212ENST00000539372 LCE2DQ5TA82 110 aaPredicted RBP10.08□□□□□ -0.8
TNFRSF1A-212ENST00000539372 NDUFV3P56181 108 aaKnown RBP10.07□□□□□ -0.8
TNFRSF1A-212ENST00000539372 PRO1854Q9UHT4 67 aa10.05□□□□□ -0.8
TNFRSF1A-212ENST00000539372 FXYD2P54710 66 aa10.04□□□□□ -0.8
TNFRSF1A-212ENST00000539372 TMEM238LA0A1B0GVL6 79 aa10.03□□□□□ -0.8
TNFRSF1A-212ENST00000539372 A6NJY4 79 aa10.03□□□□□ -0.8
TNFRSF1A-212ENST00000539372 Q6Q795 121 aa10.03□□□□□ -0.8
TNFRSF1A-212ENST00000539372 COX6B2Q6YFQ2 88 aa10.03□□□□□ -0.8
TNFRSF1A-212ENST00000539372 FABP2P12104 132 aa10.02□□□□□ -0.81
TNFRSF1A-212ENST00000539372 TEN1Q86WV5 123 aa10.02□□□□□ -0.81
TNFRSF1A-212ENST00000539372 SS18L2Q9UHA2 77 aa10.02□□□□□ -0.81
TNFRSF1A-212ENST00000539372 Q75L30 129 aa10.01□□□□□ -0.81
TNFRSF1A-212ENST00000539372 A0A087WSZ3 146 aa10□□□□□ -0.81
TNFRSF1A-212ENST00000539372 H3BMG7 143 aa10□□□□□ -0.81
TNFRSF1A-212ENST00000539372 TRIAP1O43715 76 aa10□□□□□ -0.81
TNFRSF1A-212ENST00000539372 ATP11AUNQ6ZP68 121 aa10□□□□□ -0.81
TNFRSF1A-212ENST00000539372 UQCR10Q9UDW1 63 aa10□□□□□ -0.81
TNFRSF1A-212ENST00000539372 A0A1B0GX51 115 aa9.99□□□□□ -0.81
TNFRSF1A-212ENST00000539372 Q96NJ1 140 aa9.99□□□□□ -0.81
TNFRSF1A-212ENST00000539372 M0R2T5 61 aa9.97□□□□□ -0.81
TNFRSF1A-212ENST00000539372 SMIM6P0DI80 62 aa9.97□□□□□ -0.81
TNFRSF1A-212ENST00000539372 KRTAP10-6P60371 365 aaPredicted RBP9.97□□□□□ -0.81
TNFRSF1A-212ENST00000539372 GHRHP01286 108 aa9.96□□□□□ -0.82
TNFRSF1A-212ENST00000539372 HSD52Q0P140 79 aa9.96□□□□□ -0.82
TNFRSF1A-212ENST00000539372 LORP23490 312 aaPredicted RBP9.95□□□□□ -0.82
TNFRSF1A-212ENST00000539372 K7ERJ3 54 aa9.94□□□□□ -0.82
TNFRSF1A-212ENST00000539372 A0A1B0GV72 72 aa9.93□□□□□ -0.82
TNFRSF1A-212ENST00000539372 A0A1W2PNM2 257 aa9.93□□□□□ -0.82
TNFRSF1A-212ENST00000539372 PSMB2P49721 201 aa9.92□□□□□ -0.82
TNFRSF1A-212ENST00000539372 FLGP20930 4061 aaPredicted RBP9.92□□□□□ -0.82
TNFRSF1A-212ENST00000539372 LOC105371267A0A1B0GV96 52 aa9.91□□□□□ -0.82
TNFRSF1A-212ENST00000539372 DNAL4O96015 105 aa9.9□□□□□ -0.82
TNFRSF1A-212ENST00000539372 C20orf166-AS1Q96NR2 134 aa9.9□□□□□ -0.82
TNFRSF1A-212ENST00000539372 ORMDL1Q9P0S3 153 aa9.9□□□□□ -0.82
TNFRSF1A-212ENST00000539372 DSCR10P59022 87 aa9.88□□□□□ -0.83
TNFRSF1A-212ENST00000539372 ANKRD29Q8N6D5 301 aa9.88□□□□□ -0.83
TNFRSF1A-212ENST00000539372 SIGMAR1Q99720 223 aa9.88□□□□□ -0.83
TNFRSF1A-212ENST00000539372 A8MUU9 505 aa9.87□□□□□ -0.83
TNFRSF1A-212ENST00000539372 CRCT1Q9UGL9 99 aa9.87□□□□□ -0.83
TNFRSF1A-212ENST00000539372 FSIP2Q5CZC0 6907 aa9.85□□□□□ -0.83
TNFRSF1A-212ENST00000539372 COX6CP09669 75 aa9.84□□□□□ -0.83
TNFRSF1A-212ENST00000539372 TRBV7-4A0A0J9YYF1 115 aa9.83□□□□□ -0.84
TNFRSF1A-212ENST00000539372 H3BQ85 93 aa9.83□□□□□ -0.84
TNFRSF1A-212ENST00000539372 TMEM256-PLSCR3K7ERE1 68 aa9.83□□□□□ -0.84
TNFRSF1A-212ENST00000539372 IGKV4-1P06312 121 aa9.82□□□□□ -0.84
TNFRSF1A-212ENST00000539372 TSTD3H0UI37 97 aa9.8□□□□□ -0.84
TNFRSF1A-212ENST00000539372 CCKP06307 115 aa9.79□□□□□ -0.84
TNFRSF1A-212ENST00000539372 DEFB116Q30KQ4 102 aa9.79□□□□□ -0.84
TNFRSF1A-212ENST00000539372 LINC00313P59037 77 aa9.78□□□□□ -0.84
TNFRSF1A-212ENST00000539372 M0R143 59 aa9.77□□□□□ -0.85
TNFRSF1A-212ENST00000539372 TRACP01848 142 aa9.77□□□□□ -0.85
TNFRSF1A-212ENST00000539372 UBE2V1Q13404 147 aa9.76□□□□□ -0.85
TNFRSF1A-212ENST00000539372 SCGB1C2P0DMR2 95 aa9.75□□□□□ -0.85
TNFRSF1A-212ENST00000539372 NOTCH2NLQ7Z3S9 236 aa9.75□□□□□ -0.85
TNFRSF1A-212ENST00000539372 LINC00472Q9H8W2 130 aa9.75□□□□□ -0.85
TNFRSF1A-212ENST00000539372 KRTAP16-1A8MUX0 517 aa9.74□□□□□ -0.85
TNFRSF1A-212ENST00000539372 TRBV20-1A0A075B6N2 111 aa9.73□□□□□ -0.85
TNFRSF1A-212ENST00000539372 VPS25Q9BRG1 176 aa9.73□□□□□ -0.85
TNFRSF1A-212ENST00000539372 IGHV6-1A0A0B4J1U7 121 aa9.71□□□□□ -0.86
TNFRSF1A-212ENST00000539372 RBM3P98179 157 aaKnown RBP9.69□□□□□ -0.86
TNFRSF1A-212ENST00000539372 DSCR8Q96T75 97 aa9.67□□□□□ -0.86
TNFRSF1A-212ENST00000539372 BAALC-AS2P0C853 105 aa9.65□□□□□ -0.86
TNFRSF1A-212ENST00000539372 A0A1B0GVX0 72 aa9.62□□□□□ -0.87
TNFRSF1A-212ENST00000539372 FAM236DA0A1B0GTK5 79 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 121.7 ms