RNA–Protein interactions for RNA: ENST00000538744.5

DDX55-205, Transcript of DEAD-box helicase 55, humanhuman

TSL 5 BASIC

Gene DDX55, Length 1,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-205ENST00000538744 Q8NBF4 154 aa12.56□□□□□ -0.4
DDX55-205ENST00000538744 IGLV8-61A0A075B6I0 122 aa12.54□□□□□ -0.4
DDX55-205ENST00000538744 HIST1H4AP62805 103 aaKnown RBP12.54□□□□□ -0.4
DDX55-205ENST00000538744 PSORS1C2Q9UIG4 136 aa12.54□□□□□ -0.4
DDX55-205ENST00000538744 CXCL6P80162 114 aa12.54□□□□□ -0.4
DDX55-205ENST00000538744 SPRR4Q96PI1 79 aa12.51□□□□□ -0.41
DDX55-205ENST00000538744 A0A087WVE0 104 aa12.51□□□□□ -0.41
DDX55-205ENST00000538744 NREPQ16612 68 aa12.51□□□□□ -0.41
DDX55-205ENST00000538744 IGFL1Q6UW32 110 aa12.5□□□□□ -0.41
DDX55-205ENST00000538744 CRYGAP11844 174 aa12.46□□□□□ -0.41
DDX55-205ENST00000538744 FRAS1Q86XX4 4008 aa12.46□□□□□ -0.42
DDX55-205ENST00000538744 FAM30AQ9NZY2 134 aa12.45□□□□□ -0.42
DDX55-205ENST00000538744 SCXQ7RTU7 201 aa12.45□□□□□ -0.42
DDX55-205ENST00000538744 ZNF706Q9Y5V0 76 aaPredicted RBP12.45□□□□□ -0.42
DDX55-205ENST00000538744 ATOX1O00244 68 aa12.44□□□□□ -0.42
DDX55-205ENST00000538744 ZNF861PO60384 105 aa12.44□□□□□ -0.42
DDX55-205ENST00000538744 CIRBP-AS1Q8TBR5 109 aa12.43□□□□□ -0.42
DDX55-205ENST00000538744 A0A0G2JQZ4 141 aa12.42□□□□□ -0.42
DDX55-205ENST00000538744 KRTAP10-1P60331 282 aa12.42□□□□□ -0.42
DDX55-205ENST00000538744 Q6ZSA8 131 aa12.42□□□□□ -0.42
DDX55-205ENST00000538744 BPY2O14599 106 aa12.4□□□□□ -0.42
DDX55-205ENST00000538744 LINC00483Q53H64 154 aa12.4□□□□□ -0.42
DDX55-205ENST00000538744 LCE6AA0A183 80 aa12.39□□□□□ -0.43
DDX55-205ENST00000538744 SRRM2Q9UQ35 2752 aaKnown RBP12.39□□□□□ -0.43
DDX55-205ENST00000538744 IGLV7-43P04211 117 aa12.38□□□□□ -0.43
DDX55-205ENST00000538744 DNAH11Q96DT5 4516 aa12.36□□□□□ -0.43
DDX55-205ENST00000538744 DNAH8Q96JB1 4490 aa12.34□□□□□ -0.43
DDX55-205ENST00000538744 CCDC179H3BU77 68 aa12.34□□□□□ -0.43
DDX55-205ENST00000538744 A0A087WSZ3 146 aa12.33□□□□□ -0.44
DDX55-205ENST00000538744 IGLV9-49A0A0B4J1Y8 123 aa12.32□□□□□ -0.44
DDX55-205ENST00000538744 C9orf153Q5TBE3 101 aa12.32□□□□□ -0.44
DDX55-205ENST00000538744 HYDINQ4G0P3 5121 aa12.32□□□□□ -0.44
DDX55-205ENST00000538744 PKD1P98161 4303 aa12.32□□□□□ -0.44
DDX55-205ENST00000538744 DNAH5Q8TE73 4624 aa12.32□□□□□ -0.44
DDX55-205ENST00000538744 IGKV4-1P06312 121 aa12.31□□□□□ -0.44
DDX55-205ENST00000538744 RPL37AP61513 92 aaKnown RBP12.31□□□□□ -0.44
DDX55-205ENST00000538744 LINC00336Q6ZUF6 198 aa12.31□□□□□ -0.44
DDX55-205ENST00000538744 Q8N9L7 120 aa12.3□□□□□ -0.44
DDX55-205ENST00000538744 FAT2Q9NYQ8 4349 aa12.3□□□□□ -0.44
DDX55-205ENST00000538744 COX7CP15954 63 aa12.28□□□□□ -0.44
DDX55-205ENST00000538744 UQCRQO14949 82 aa12.28□□□□□ -0.44
DDX55-205ENST00000538744 SERP2Q8N6R1 65 aa12.28□□□□□ -0.44
DDX55-205ENST00000538744 DSCR10P59022 87 aa12.23□□□□□ -0.45
DDX55-205ENST00000538744 MOBPQ13875 183 aa12.23□□□□□ -0.45
DDX55-205ENST00000538744 ANAPC11Q9NYG5 84 aa12.23□□□□□ -0.45
DDX55-205ENST00000538744 SMIM20Q8N5G0 67 aa12.2□□□□□ -0.46
DDX55-205ENST00000538744 SACSQ9NZJ4 4579 aa12.19□□□□□ -0.46
DDX55-205ENST00000538744 K7EQZ3 153 aa12.17□□□□□ -0.46
DDX55-205ENST00000538744 DEFB116Q30KQ4 102 aa12.17□□□□□ -0.46
DDX55-205ENST00000538744 TRAV7A0A075B6U4 112 aa12.17□□□□□ -0.46
DDX55-205ENST00000538744 LINC00472Q9H8W2 130 aa12.15□□□□□ -0.46
DDX55-205ENST00000538744 A0A1B0GVY2 172 aa12.14□□□□□ -0.47
DDX55-205ENST00000538744 HRCT1Q6UXD1 115 aa12.13□□□□□ -0.47
DDX55-205ENST00000538744 SS18L2Q9UHA2 77 aa12.12□□□□□ -0.47
DDX55-205ENST00000538744 J3KT08 172 aa12.09□□□□□ -0.47
DDX55-205ENST00000538744 SSBP3-AS1Q7Z2R9 100 aa12.08□□□□□ -0.48
DDX55-205ENST00000538744 A8MWP4 228 aa12.06□□□□□ -0.48
DDX55-205ENST00000538744 HCG22E2RYF7 251 aa12.06□□□□□ -0.48
DDX55-205ENST00000538744 FAM229BQ4G0N7 80 aa12.06□□□□□ -0.48
DDX55-205ENST00000538744 Q96NJ1 140 aa12.05□□□□□ -0.48
DDX55-205ENST00000538744 CD164Q04900 197 aa12.04□□□□□ -0.48
DDX55-205ENST00000538744 PRR15Q8IV56 129 aa12.04□□□□□ -0.48
DDX55-205ENST00000538744 OCR1Q9BZK8 76 aa12.03□□□□□ -0.48
DDX55-205ENST00000538744 LRP1BQ9NZR2 4599 aa12.03□□□□□ -0.48
DDX55-205ENST00000538744 A0A087X002 238 aa12.01□□□□□ -0.49
DDX55-205ENST00000538744 C20orf197Q8N268 126 aa12□□□□□ -0.49
DDX55-205ENST00000538744 NDUFB1O75438 58 aa11.99□□□□□ -0.49
DDX55-205ENST00000538744 KRTAP1-4P0C5Y4 121 aa11.99□□□□□ -0.49
DDX55-205ENST00000538744 KRTAP13-2Q52LG2 175 aa11.99□□□□□ -0.49
DDX55-205ENST00000538744 WFDC13Q8IUB5 93 aa11.97□□□□□ -0.49
DDX55-205ENST00000538744 CYSTM1Q9H1C7 97 aa11.97□□□□□ -0.49
DDX55-205ENST00000538744 PKHD1P08F94 4074 aa11.95□□□□□ -0.5
DDX55-205ENST00000538744 SPINK6Q6UWN8 80 aa11.94□□□□□ -0.5
DDX55-205ENST00000538744 KRTAP29-1A8MX34 341 aaPredicted RBP11.94□□□□□ -0.5
DDX55-205ENST00000538744 KLKP1Q107X0 134 aa11.93□□□□□ -0.5
DDX55-205ENST00000538744 CASC2Q6XLA1 102 aa11.93□□□□□ -0.5
DDX55-205ENST00000538744 SMR3BP02814 79 aaPredicted RBP11.92□□□□□ -0.5
DDX55-205ENST00000538744 RYR2Q92736 4967 aa11.92□□□□□ -0.5
DDX55-205ENST00000538744 CDK2AP2O75956 126 aa11.91□□□□□ -0.5
DDX55-205ENST00000538744 PLA2G1BP04054 148 aaKnown RBP11.9□□□□□ -0.5
DDX55-205ENST00000538744 MMP24-AS1A0A0U1RRL7 71 aa11.89□□□□□ -0.51
DDX55-205ENST00000538744 ASB16-AS1Q495Z4 193 aa11.89□□□□□ -0.51
DDX55-205ENST00000538744 TMEM254Q8TBM7 123 aa11.89□□□□□ -0.51
DDX55-205ENST00000538744 SNURFQ9Y675 71 aa11.89□□□□□ -0.51
DDX55-205ENST00000538744 DYNC1H1Q14204 4646 aaKnown RBP11.88□□□□□ -0.51
DDX55-205ENST00000538744 A0A1B0GVX0 72 aa11.87□□□□□ -0.51
DDX55-205ENST00000538744 VPS13BQ7Z7G8 4022 aa11.87□□□□□ -0.51
DDX55-205ENST00000538744 TMEM258P61165 79 aa11.86□□□□□ -0.51
DDX55-205ENST00000538744 C8orf17Q9NRJ1 99 aa11.84□□□□□ -0.51
DDX55-205ENST00000538744 IGHV6-1A0A0B4J1U7 121 aa11.83□□□□□ -0.52
DDX55-205ENST00000538744 hDV103S1A0JD37 113 aa11.83□□□□□ -0.52
DDX55-205ENST00000538744 Q5XG85 94 aa11.83□□□□□ -0.52
DDX55-205ENST00000538744 TYMSOSQ8TAI1 123 aa11.83□□□□□ -0.52
DDX55-205ENST00000538744 A0A0U1RQV1 116 aa11.83□□□□□ -0.52
DDX55-205ENST00000538744 KMT2CQ8NEZ4 4911 aaKnown RBP11.81□□□□□ -0.52
DDX55-205ENST00000538744 NDUFC1O43677 76 aa11.81□□□□□ -0.52
DDX55-205ENST00000538744 H7BZZ5 65 aa11.8□□□□□ -0.52
DDX55-205ENST00000538744 KRTAP10-4P60372 401 aaPredicted RBP11.8□□□□□ -0.52
DDX55-205ENST00000538744 C5orf47Q569G3 176 aa11.8□□□□□ -0.52
DDX55-205ENST00000538744 LIMD2Q9BT23 127 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms