RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 ST20-AS1Q8NBB2 130 aa6.52□□□□□ -1.37
TNFRSF1A-211ENST00000538363 APOBP04114 4563 aaKnown RBP6.51□□□□□ -1.37
TNFRSF1A-211ENST00000538363 F8W1H4 67 aa6.51□□□□□ -1.37
TNFRSF1A-211ENST00000538363 HERC2O95714 4834 aa6.5□□□□□ -1.37
TNFRSF1A-211ENST00000538363 H3BT86 120 aa6.5□□□□□ -1.37
TNFRSF1A-211ENST00000538363 Q5VSD8 79 aa6.5□□□□□ -1.37
TNFRSF1A-211ENST00000538363 SPINK6Q6UWN8 80 aa6.5□□□□□ -1.37
TNFRSF1A-211ENST00000538363 ANKRD29Q8N6D5 301 aa6.5□□□□□ -1.37
TNFRSF1A-211ENST00000538363 PPDPFLQ8WWR9 84 aa6.5□□□□□ -1.37
TNFRSF1A-211ENST00000538363 A0A1B0GV72 72 aa6.49□□□□□ -1.37
TNFRSF1A-211ENST00000538363 KRTAP13-1Q8IUC0 172 aa6.49□□□□□ -1.37
TNFRSF1A-211ENST00000538363 KIAA1109Q2LD37 5005 aa6.48□□□□□ -1.37
TNFRSF1A-211ENST00000538363 SPRR4Q96PI1 79 aa6.48□□□□□ -1.37
TNFRSF1A-211ENST00000538363 RYR1P21817 5038 aa6.47□□□□□ -1.37
TNFRSF1A-211ENST00000538363 NDUFV3P56181 108 aaKnown RBP6.47□□□□□ -1.37
TNFRSF1A-211ENST00000538363 C9orf153Q5TBE3 101 aa6.47□□□□□ -1.37
TNFRSF1A-211ENST00000538363 KRTAP17-1Q9BYP8 105 aa6.47□□□□□ -1.37
TNFRSF1A-211ENST00000538363 IGLV9-49A0A0B4J1Y8 123 aa6.46□□□□□ -1.38
TNFRSF1A-211ENST00000538363 Q8N377 158 aa6.46□□□□□ -1.38
TNFRSF1A-211ENST00000538363 IGLV5-48A0A075B6I7 105 aa6.45□□□□□ -1.38
TNFRSF1A-211ENST00000538363 JMJD7-PLA2G4BH0Y9G9 81 aa6.45□□□□□ -1.38
TNFRSF1A-211ENST00000538363 Q8N1X5 172 aa6.45□□□□□ -1.38
TNFRSF1A-211ENST00000538363 RBM3P98179 157 aaKnown RBP6.44□□□□□ -1.38
TNFRSF1A-211ENST00000538363 C3orf22Q8N5N4 141 aa6.44□□□□□ -1.38
TNFRSF1A-211ENST00000538363 DSCR8Q96T75 97 aa6.44□□□□□ -1.38
TNFRSF1A-211ENST00000538363 ANAPC11Q9NYG5 84 aa6.43□□□□□ -1.38
TNFRSF1A-211ENST00000538363 HSPG2P98160 4391 aa6.42□□□□□ -1.38
TNFRSF1A-211ENST00000538363 CRYGAP11844 174 aa6.42□□□□□ -1.38
TNFRSF1A-211ENST00000538363 ETDBQ3ZM63 59 aa6.42□□□□□ -1.38
TNFRSF1A-211ENST00000538363 PRO0461Q9UI25 63 aa6.42□□□□□ -1.38
TNFRSF1A-211ENST00000538363 SPRR1BP22528 89 aa6.41□□□□□ -1.38
TNFRSF1A-211ENST00000538363 LINC01547P58512 204 aaPredicted RBP6.41□□□□□ -1.38
TNFRSF1A-211ENST00000538363 TEN1Q86WV5 123 aa6.41□□□□□ -1.38
TNFRSF1A-211ENST00000538363 VPS25Q9BRG1 176 aa6.41□□□□□ -1.38
TNFRSF1A-211ENST00000538363 KRTAP9-9Q9BYP9 154 aa6.41□□□□□ -1.38
TNFRSF1A-211ENST00000538363 KRTAP9-4Q9BYQ2 154 aa6.41□□□□□ -1.38
TNFRSF1A-211ENST00000538363 MOBPQ13875 183 aa6.4□□□□□ -1.38
TNFRSF1A-211ENST00000538363 FAM229BQ4G0N7 80 aa6.4□□□□□ -1.38
TNFRSF1A-211ENST00000538363 LINC00483Q53H64 154 aa6.39□□□□□ -1.39
TNFRSF1A-211ENST00000538363 Q6JHZ5 121 aa6.39□□□□□ -1.39
TNFRSF1A-211ENST00000538363 C14orf132Q9NPU4 83 aa6.39□□□□□ -1.39
TNFRSF1A-211ENST00000538363 PDE6GP18545 87 aa6.38□□□□□ -1.39
TNFRSF1A-211ENST00000538363 SMIM29Q86T20 159 aa6.38□□□□□ -1.39
TNFRSF1A-211ENST00000538363 Q8NBF4 154 aa6.38□□□□□ -1.39
TNFRSF1A-211ENST00000538363 TYMSOSQ8TAI1 123 aa6.38□□□□□ -1.39
TNFRSF1A-211ENST00000538363 J3QR89 54 aa6.37□□□□□ -1.39
TNFRSF1A-211ENST00000538363 C21orf62-AS1Q17RA5 79 aa6.37□□□□□ -1.39
TNFRSF1A-211ENST00000538363 KRTAP10-4P60372 401 aaPredicted RBP6.36□□□□□ -1.39
TNFRSF1A-211ENST00000538363 SSBP3-AS1Q7Z2R9 100 aa6.36□□□□□ -1.39
TNFRSF1A-211ENST00000538363 LINC01600Q96MT4 127 aa6.36□□□□□ -1.39
TNFRSF1A-211ENST00000538363 KRTAP4-5Q9BYR2 181 aa6.36□□□□□ -1.39
TNFRSF1A-211ENST00000538363 CCKP06307 115 aa6.35□□□□□ -1.39
TNFRSF1A-211ENST00000538363 HRCT1Q6UXD1 115 aa6.35□□□□□ -1.39
TNFRSF1A-211ENST00000538363 FAT1Q14517 4588 aa6.34□□□□□ -1.39
TNFRSF1A-211ENST00000538363 KRTAP19-4Q3LI73 84 aa6.34□□□□□ -1.39
TNFRSF1A-211ENST00000538363 PRR26Q8N8Z3 221 aa6.34□□□□□ -1.39
TNFRSF1A-211ENST00000538363 PCLOQ9Y6V0 5065 aa6.34□□□□□ -1.39
TNFRSF1A-211ENST00000538363 IGFL1Q6UW32 110 aa6.33□□□□□ -1.4
TNFRSF1A-211ENST00000538363 LOC110117498A0A087WWA1 95 aa6.32□□□□□ -1.4
TNFRSF1A-211ENST00000538363 A0A087X002 238 aa6.32□□□□□ -1.4
TNFRSF1A-211ENST00000538363 KRTAP1-4P0C5Y4 121 aa6.32□□□□□ -1.4
TNFRSF1A-211ENST00000538363 OBSCN-AS1Q96MR7 158 aa6.32□□□□□ -1.4
TNFRSF1A-211ENST00000538363 IGLV8-61A0A075B6I0 122 aa6.31□□□□□ -1.4
TNFRSF1A-211ENST00000538363 A0A0G2JQZ4 141 aa6.31□□□□□ -1.4
TNFRSF1A-211ENST00000538363 TRBV7-4A0A0J9YYF1 115 aa6.3□□□□□ -1.4
TNFRSF1A-211ENST00000538363 Q6ZQT0 140 aa6.3□□□□□ -1.4
TNFRSF1A-211ENST00000538363 VPS13BQ7Z7G8 4022 aa6.3□□□□□ -1.4
TNFRSF1A-211ENST00000538363 K7ERU9 68 aa6.29□□□□□ -1.4
TNFRSF1A-211ENST00000538363 KRTAP13-2Q52LG2 175 aa6.29□□□□□ -1.4
TNFRSF1A-211ENST00000538363 LINC00304Q8N9R0 145 aa6.28□□□□□ -1.4
TNFRSF1A-211ENST00000538363 ABCA13Q86UQ4 5058 aa6.27□□□□□ -1.41
TNFRSF1A-211ENST00000538363 FLG2Q5D862 2391 aaPredicted RBP6.27□□□□□ -1.41
TNFRSF1A-211ENST00000538363 KRTAP4-8A0A0G2JLE6 195 aa6.27□□□□□ -1.41
TNFRSF1A-211ENST00000538363 ACYP1P07311 99 aa6.27□□□□□ -1.41
TNFRSF1A-211ENST00000538363 SPAG11AQ6PDA7 123 aa6.27□□□□□ -1.41
TNFRSF1A-211ENST00000538363 PKHD1L1Q86WI1 4243 aa6.26□□□□□ -1.41
TNFRSF1A-211ENST00000538363 A0A1W2PNM2 257 aa6.26□□□□□ -1.41
TNFRSF1A-211ENST00000538363 A0A087WSZ3 146 aa6.25□□□□□ -1.41
TNFRSF1A-211ENST00000538363 A0A1B0GW54 56 aa6.25□□□□□ -1.41
TNFRSF1A-211ENST00000538363 OXTP01178 125 aa6.25□□□□□ -1.41
TNFRSF1A-211ENST00000538363 CD164Q04900 197 aa6.25□□□□□ -1.41
TNFRSF1A-211ENST00000538363 NREPQ16612 68 aa6.25□□□□□ -1.41
TNFRSF1A-211ENST00000538363 LIMD2Q9BT23 127 aa6.25□□□□□ -1.41
TNFRSF1A-211ENST00000538363 UBL5Q9BZL1 73 aa6.25□□□□□ -1.41
TNFRSF1A-211ENST00000538363 SS18L2Q9UHA2 77 aa6.25□□□□□ -1.41
TNFRSF1A-211ENST00000538363 TRBV7-7A0A0K0K1E9 115 aa6.24□□□□□ -1.41
TNFRSF1A-211ENST00000538363 SRRM2Q9UQ35 2752 aaKnown RBP6.24□□□□□ -1.41
TNFRSF1A-211ENST00000538363 SPINK1P00995 79 aa6.23□□□□□ -1.41
TNFRSF1A-211ENST00000538363 Q6Q795 121 aa6.23□□□□□ -1.41
TNFRSF1A-211ENST00000538363 LCE4AQ5TA78 99 aa6.21□□□□□ -1.42
TNFRSF1A-211ENST00000538363 FAM240AA0A1B0GVK7 77 aa6.2□□□□□ -1.42
TNFRSF1A-211ENST00000538363 KRTAP10-8P60410 259 aa6.19□□□□□ -1.42
TNFRSF1A-211ENST00000538363 LINC00846Q9NV44 126 aa6.19□□□□□ -1.42
TNFRSF1A-211ENST00000538363 KRTAP29-1A8MX34 341 aaPredicted RBP6.17□□□□□ -1.42
TNFRSF1A-211ENST00000538363 BPY2O14599 106 aa6.16□□□□□ -1.42
TNFRSF1A-211ENST00000538363 LCE1DQ5T752 114 aa6.16□□□□□ -1.42
TNFRSF1A-211ENST00000538363 Q6ZVQ6 151 aa6.16□□□□□ -1.42
TNFRSF1A-211ENST00000538363 IGKV4-1P06312 121 aa6.15□□□□□ -1.42
TNFRSF1A-211ENST00000538363 DEFB116Q30KQ4 102 aa6.15□□□□□ -1.42
TNFRSF1A-211ENST00000538363 SIGMAR1Q99720 223 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms