RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 KMT2AQ03164 3969 aa8.71□□□□□ -1.02
LIMK1-208ENST00000538333 F8WEM9 126 aa8.71□□□□□ -1.02
LIMK1-208ENST00000538333 SMIM20Q8N5G0 67 aa8.71□□□□□ -1.02
LIMK1-208ENST00000538333 IGFL1Q6UW32 110 aa8.7□□□□□ -1.02
LIMK1-208ENST00000538333 A0A087WTM6 91 aa8.69□□□□□ -1.02
LIMK1-208ENST00000538333 SPRR1BP22528 89 aa8.69□□□□□ -1.02
LIMK1-208ENST00000538333 Q6ZR54 194 aa8.69□□□□□ -1.02
LIMK1-208ENST00000538333 SPACA4Q8TDM5 124 aa8.69□□□□□ -1.02
LIMK1-208ENST00000538333 A0A0G2JQZ4 141 aa8.68□□□□□ -1.02
LIMK1-208ENST00000538333 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.68□□□□□ -1.02
LIMK1-208ENST00000538333 KRTAP13-1Q8IUC0 172 aa8.67□□□□□ -1.02
LIMK1-208ENST00000538333 HECTD4Q9Y4D8 3996 aa8.66□□□□□ -1.02
LIMK1-208ENST00000538333 C20orf197Q8N268 126 aa8.66□□□□□ -1.02
LIMK1-208ENST00000538333 DNAH2Q9P225 4427 aa8.65□□□□□ -1.02
LIMK1-208ENST00000538333 UBE2AP49459 152 aa8.65□□□□□ -1.02
LIMK1-208ENST00000538333 C5orf47Q569G3 176 aa8.65□□□□□ -1.02
LIMK1-208ENST00000538333 TMEM258P61165 79 aa8.65□□□□□ -1.03
LIMK1-208ENST00000538333 DSCR10P59022 87 aa8.63□□□□□ -1.03
LIMK1-208ENST00000538333 DNAH17Q9UFH2 4485 aa8.63□□□□□ -1.03
LIMK1-208ENST00000538333 DPH3Q96FX2 82 aa8.63□□□□□ -1.03
LIMK1-208ENST00000538333 SRRM2Q9UQ35 2752 aaKnown RBP8.62□□□□□ -1.03
LIMK1-208ENST00000538333 KLKP1Q107X0 134 aa8.62□□□□□ -1.03
LIMK1-208ENST00000538333 RTL8CO15255 209 aa8.61□□□□□ -1.03
LIMK1-208ENST00000538333 OCR1Q9BZK8 76 aa8.61□□□□□ -1.03
LIMK1-208ENST00000538333 A0A087WSZ3 146 aa8.59□□□□□ -1.03
LIMK1-208ENST00000538333 K7EQZ3 153 aa8.58□□□□□ -1.04
LIMK1-208ENST00000538333 H7BZZ5 65 aa8.58□□□□□ -1.04
LIMK1-208ENST00000538333 SNURFQ9Y675 71 aa8.56□□□□□ -1.04
LIMK1-208ENST00000538333 C1orf134Q5TEV5 83 aa8.56□□□□□ -1.04
LIMK1-208ENST00000538333 PLAC8Q9NZF1 115 aa8.56□□□□□ -1.04
LIMK1-208ENST00000538333 DNAH6Q9C0G6 4158 aa8.56□□□□□ -1.04
LIMK1-208ENST00000538333 DNAH8Q96JB1 4490 aa8.54□□□□□ -1.04
LIMK1-208ENST00000538333 RPS28P62857 69 aaKnown RBP8.54□□□□□ -1.04
LIMK1-208ENST00000538333 IGLV5-52A0A0A0MRZ9 124 aa8.53□□□□□ -1.04
LIMK1-208ENST00000538333 DEFB116Q30KQ4 102 aa8.53□□□□□ -1.04
LIMK1-208ENST00000538333 TMEM254Q8TBM7 123 aa8.53□□□□□ -1.04
LIMK1-208ENST00000538333 PSORS1C2Q9UIG4 136 aa8.53□□□□□ -1.04
LIMK1-208ENST00000538333 FRAS1Q86XX4 4008 aa8.53□□□□□ -1.04
LIMK1-208ENST00000538333 J3KT08 172 aa8.52□□□□□ -1.04
LIMK1-208ENST00000538333 LINC00483Q53H64 154 aa8.52□□□□□ -1.05
LIMK1-208ENST00000538333 LY6G6CO95867 125 aa8.51□□□□□ -1.05
LIMK1-208ENST00000538333 HCG22E2RYF7 251 aa8.49□□□□□ -1.05
LIMK1-208ENST00000538333 LINC00472Q9H8W2 130 aa8.49□□□□□ -1.05
LIMK1-208ENST00000538333 FAM30AQ9NZY2 134 aa8.49□□□□□ -1.05
LIMK1-208ENST00000538333 A0A0U1RQV1 116 aa8.48□□□□□ -1.05
LIMK1-208ENST00000538333 LCE6AA0A183 80 aa8.48□□□□□ -1.05
LIMK1-208ENST00000538333 FAM236DA0A1B0GTK5 79 aa8.48□□□□□ -1.05
LIMK1-208ENST00000538333 NDUFC1O43677 76 aa8.48□□□□□ -1.05
LIMK1-208ENST00000538333 FAM236CP0DP71 79 aa8.48□□□□□ -1.05
LIMK1-208ENST00000538333 WWC2-AS2Q96NR7 200 aa8.47□□□□□ -1.05
LIMK1-208ENST00000538333 OXTP01178 125 aa8.46□□□□□ -1.05
LIMK1-208ENST00000538333 RPL37AP61513 92 aaKnown RBP8.46□□□□□ -1.05
LIMK1-208ENST00000538333 ZNF861PO60384 105 aa8.46□□□□□ -1.06
LIMK1-208ENST00000538333 IGLV9-49A0A0B4J1Y8 123 aa8.45□□□□□ -1.06
LIMK1-208ENST00000538333 ZNF706Q9Y5V0 76 aaPredicted RBP8.45□□□□□ -1.06
LIMK1-208ENST00000538333 DNAH5Q8TE73 4624 aa8.44□□□□□ -1.06
LIMK1-208ENST00000538333 DNAH11Q96DT5 4516 aa8.43□□□□□ -1.06
LIMK1-208ENST00000538333 ALMS1Q8TCU4 4167 aa8.43□□□□□ -1.06
LIMK1-208ENST00000538333 KRTAP29-1A8MX34 341 aaPredicted RBP8.43□□□□□ -1.06
LIMK1-208ENST00000538333 PRR15Q8IV56 129 aa8.43□□□□□ -1.06
LIMK1-208ENST00000538333 A8MWP4 228 aa8.42□□□□□ -1.06
LIMK1-208ENST00000538333 KRTAP10-2P60368 255 aa8.41□□□□□ -1.06
LIMK1-208ENST00000538333 WFDC13Q8IUB5 93 aa8.41□□□□□ -1.06
LIMK1-208ENST00000538333 Q96NJ1 140 aa8.4□□□□□ -1.06
LIMK1-208ENST00000538333 ANAPC11Q9NYG5 84 aa8.39□□□□□ -1.07
LIMK1-208ENST00000538333 HYDINQ4G0P3 5121 aa8.39□□□□□ -1.07
LIMK1-208ENST00000538333 IGLV7-43P04211 117 aa8.39□□□□□ -1.07
LIMK1-208ENST00000538333 MOBPQ13875 183 aa8.38□□□□□ -1.07
LIMK1-208ENST00000538333 ZCCHC13Q8WW36 166 aaKnown RBP8.38□□□□□ -1.07
LIMK1-208ENST00000538333 SERP1Q9Y6X1 66 aa8.38□□□□□ -1.07
LIMK1-208ENST00000538333 ATP5EP56381 51 aaPredicted RBP8.37□□□□□ -1.07
LIMK1-208ENST00000538333 CIRBP-AS1Q8TBR5 109 aa8.37□□□□□ -1.07
LIMK1-208ENST00000538333 CASC2Q6XLA1 102 aa8.36□□□□□ -1.07
LIMK1-208ENST00000538333 FAT2Q9NYQ8 4349 aa8.36□□□□□ -1.07
LIMK1-208ENST00000538333 HRCT1Q6UXD1 115 aa8.35□□□□□ -1.07
LIMK1-208ENST00000538333 PKD1P98161 4303 aa8.35□□□□□ -1.07
LIMK1-208ENST00000538333 MMP24-AS1A0A0U1RRL7 71 aa8.34□□□□□ -1.08
LIMK1-208ENST00000538333 Q6ZSA8 131 aa8.34□□□□□ -1.08
LIMK1-208ENST00000538333 SACSQ9NZJ4 4579 aa8.33□□□□□ -1.08
LIMK1-208ENST00000538333 KMT2CQ8NEZ4 4911 aaKnown RBP8.32□□□□□ -1.08
LIMK1-208ENST00000538333 NDUFB1O75438 58 aa8.31□□□□□ -1.08
LIMK1-208ENST00000538333 KRTAP10-1P60331 282 aa8.3□□□□□ -1.08
LIMK1-208ENST00000538333 ASB16-AS1Q495Z4 193 aa8.29□□□□□ -1.08
LIMK1-208ENST00000538333 Q5XG85 94 aa8.28□□□□□ -1.08
LIMK1-208ENST00000538333 hDV103S1A0JD37 113 aa8.27□□□□□ -1.09
LIMK1-208ENST00000538333 MP68P56378 58 aa8.27□□□□□ -1.09
LIMK1-208ENST00000538333 LRP1BQ9NZR2 4599 aa8.26□□□□□ -1.09
LIMK1-208ENST00000538333 A0A1B0GVX0 72 aa8.25□□□□□ -1.09
LIMK1-208ENST00000538333 C8orf17Q9NRJ1 99 aa8.25□□□□□ -1.09
LIMK1-208ENST00000538333 H0Y9P7 68 aa8.24□□□□□ -1.09
LIMK1-208ENST00000538333 CD164Q04900 197 aa8.24□□□□□ -1.09
LIMK1-208ENST00000538333 LINC00208Q96KT6 92 aa8.24□□□□□ -1.09
LIMK1-208ENST00000538333 TRAV22A0A0B4J277 110 aa8.23□□□□□ -1.09
LIMK1-208ENST00000538333 SEC61GP60059 68 aa8.23□□□□□ -1.09
LIMK1-208ENST00000538333 SSBP3-AS1Q7Z2R9 100 aa8.23□□□□□ -1.09
LIMK1-208ENST00000538333 H3BPC8 53 aa8.22□□□□□ -1.09
LIMK1-208ENST00000538333 RYR2Q92736 4967 aa8.21□□□□□ -1.09
LIMK1-208ENST00000538333 IGHV6-1A0A0B4J1U7 121 aa8.21□□□□□ -1.09
LIMK1-208ENST00000538333 SMIM26A0A096LP01 95 aa8.21□□□□□ -1.1
LIMK1-208ENST00000538333 FP248Q71RG6 208 aaPredicted RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms