RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 C1orf137Q5JT78 98 aa6.87□□□□□ -1.31
RTN3-208ENST00000537981 NKAPP1Q8N9T2 125 aa6.87□□□□□ -1.31
RTN3-208ENST00000537981 C7orf33Q8WU49 177 aa6.87□□□□□ -1.31
RTN3-208ENST00000537981 ATRQ13535 2644 aa6.87□□□□□ -1.31
RTN3-208ENST00000537981 INAFM1C9JVW0 142 aa6.86□□□□□ -1.31
RTN3-208ENST00000537981 CDC42SE1Q9NRR8 79 aa6.86□□□□□ -1.31
RTN3-208ENST00000537981 KRTAP1-1Q07627 177 aa6.86□□□□□ -1.31
RTN3-208ENST00000537981 SPAG11AQ6PDA7 123 aa6.86□□□□□ -1.31
RTN3-208ENST00000537981 COA5Q86WW8 74 aa6.85□□□□□ -1.31
RTN3-208ENST00000537981 KCNQ1DNQ9H478 68 aa6.85□□□□□ -1.31
RTN3-208ENST00000537981 LOC101927531A0A1B0GV80 90 aa6.84□□□□□ -1.31
RTN3-208ENST00000537981 Q8NBF4 154 aa6.84□□□□□ -1.31
RTN3-208ENST00000537981 NDUFB1O75438 58 aa6.84□□□□□ -1.31
RTN3-208ENST00000537981 Q9BRP9 147 aa6.84□□□□□ -1.31
RTN3-208ENST00000537981 H0Y9P7 68 aa6.83□□□□□ -1.32
RTN3-208ENST00000537981 PRO0255Q9UI72 69 aa6.82□□□□□ -1.32
RTN3-208ENST00000537981 RPL37AP8A6NKH3 93 aa6.82□□□□□ -1.32
RTN3-208ENST00000537981 Q6YL49 198 aa6.82□□□□□ -1.32
RTN3-208ENST00000537981 IGKV2D-24A0A075B6R9 120 aa6.81□□□□□ -1.32
RTN3-208ENST00000537981 GVQW2A0A096LPI5 108 aaPredicted RBP6.81□□□□□ -1.32
RTN3-208ENST00000537981 REG3GQ6UW15 175 aa6.81□□□□□ -1.32
RTN3-208ENST00000537981 LINC01554Q52M75 96 aa6.8□□□□□ -1.32
RTN3-208ENST00000537981 CAMK2N2Q96S95 79 aa6.8□□□□□ -1.32
RTN3-208ENST00000537981 COL7A1Q02388 2944 aa6.8□□□□□ -1.32
RTN3-208ENST00000537981 SPRR4Q96PI1 79 aa6.8□□□□□ -1.32
RTN3-208ENST00000537981 ZNF706Q9Y5V0 76 aaPredicted RBP6.8□□□□□ -1.32
RTN3-208ENST00000537981 COL6A5A8TX70 2615 aa6.8□□□□□ -1.32
RTN3-208ENST00000537981 IGLV1-51P01701 117 aa6.79□□□□□ -1.32
RTN3-208ENST00000537981 C9orf163Q8N9P6 203 aa6.79□□□□□ -1.32
RTN3-208ENST00000537981 SPANXA2-OT1Q8N9U9 137 aa6.78□□□□□ -1.32
RTN3-208ENST00000537981 PCOTHQ58A44 107 aa6.78□□□□□ -1.32
RTN3-208ENST00000537981 FAM168BA1KXE4 195 aa6.77□□□□□ -1.33
RTN3-208ENST00000537981 KRTAP29-1A8MX34 341 aaPredicted RBP6.77□□□□□ -1.33
RTN3-208ENST00000537981 Q8NAQ8 132 aa6.77□□□□□ -1.33
RTN3-208ENST00000537981 IGHV6-1A0A0B4J1U7 121 aa6.76□□□□□ -1.33
RTN3-208ENST00000537981 HTN3P15516 51 aa6.76□□□□□ -1.33
RTN3-208ENST00000537981 PRR34Q9NV39 138 aa6.76□□□□□ -1.33
RTN3-208ENST00000537981 PLAC8Q9NZF1 115 aa6.76□□□□□ -1.33
RTN3-208ENST00000537981 LINC00476Q8WZB0 136 aa6.75□□□□□ -1.33
RTN3-208ENST00000537981 IGLV1-50A0A075B6I6 118 aa6.74□□□□□ -1.33
RTN3-208ENST00000537981 C15orf56Q8N910 161 aa6.74□□□□□ -1.33
RTN3-208ENST00000537981 STAB1Q9NY15 2570 aa6.74□□□□□ -1.33
RTN3-208ENST00000537981 A0A087WSZ3 146 aa6.74□□□□□ -1.33
RTN3-208ENST00000537981 Q6ZRX8 168 aa6.74□□□□□ -1.33
RTN3-208ENST00000537981 CNBPP62633 177 aaKnown RBP6.73□□□□□ -1.33
RTN3-208ENST00000537981 TENM1Q9UKZ4 2725 aa6.72□□□□□ -1.33
RTN3-208ENST00000537981 KRTAP4-16G5E9R7 235 aaPredicted RBP6.72□□□□□ -1.33
RTN3-208ENST00000537981 LINC01558Q9Y6Z2 57 aa6.72□□□□□ -1.33
RTN3-208ENST00000537981 DNHD1Q96M86 4753 aa6.72□□□□□ -1.33
RTN3-208ENST00000537981 EGFEM1PQ0D2K5 195 aa6.72□□□□□ -1.33
RTN3-208ENST00000537981 IGFL1Q6UW32 110 aa6.72□□□□□ -1.33
RTN3-208ENST00000537981 CASC2Q6XLA1 102 aa6.71□□□□□ -1.34
RTN3-208ENST00000537981 LCE2DQ5TA82 110 aaPredicted RBP6.7□□□□□ -1.34
RTN3-208ENST00000537981 IGLV7-46A0A075B6I9 117 aa6.7□□□□□ -1.34
RTN3-208ENST00000537981 KRTAP26-1Q6PEX3 210 aa6.7□□□□□ -1.34
RTN3-208ENST00000537981 DEFB135Q30KP9 77 aa6.69□□□□□ -1.34
RTN3-208ENST00000537981 KRTAP7-1Q8IUC3 87 aa6.69□□□□□ -1.34
RTN3-208ENST00000537981 A0A1B0GW54 56 aa6.68□□□□□ -1.34
RTN3-208ENST00000537981 IGLV5-37A0A075B6J1 123 aa6.68□□□□□ -1.34
RTN3-208ENST00000537981 TENM3Q9P273 2699 aa6.67□□□□□ -1.34
RTN3-208ENST00000537981 LELP1Q5T871 98 aa6.67□□□□□ -1.34
RTN3-208ENST00000537981 NOTCH2NLQ7Z3S9 236 aa6.67□□□□□ -1.34
RTN3-208ENST00000537981 HRES1P13985 223 aa6.67□□□□□ -1.34
RTN3-208ENST00000537981 DHRS4-AS1Q9P1J3 65 aa6.67□□□□□ -1.34
RTN3-208ENST00000537981 LYSTQ99698 3801 aa6.66□□□□□ -1.34
RTN3-208ENST00000537981 IGLV5-52A0A0A0MRZ9 124 aa6.65□□□□□ -1.35
RTN3-208ENST00000537981 DNAH10Q8IVF4 4471 aa6.64□□□□□ -1.35
RTN3-208ENST00000537981 KRTAP24-1Q3LI83 254 aa6.64□□□□□ -1.35
RTN3-208ENST00000537981 ALMS1Q8TCU4 4167 aa6.64□□□□□ -1.35
RTN3-208ENST00000537981 ANK2Q01484 3957 aa6.63□□□□□ -1.35
RTN3-208ENST00000537981 NBEAL1Q6ZS30 2694 aa6.62□□□□□ -1.35
RTN3-208ENST00000537981 SPRR1AP35321 89 aa6.61□□□□□ -1.35
RTN3-208ENST00000537981 H3BPC8 53 aa6.61□□□□□ -1.35
RTN3-208ENST00000537981 PRLHP81277 87 aa6.6□□□□□ -1.35
RTN3-208ENST00000537981 MMP24-AS1A0A0U1RRL7 71 aa6.59□□□□□ -1.35
RTN3-208ENST00000537981 A0A096LNI7 61 aa6.58□□□□□ -1.36
RTN3-208ENST00000537981 CMC4P56277 68 aaPredicted RBP6.58□□□□□ -1.36
RTN3-208ENST00000537981 KRTAP23-1A1A580 65 aa6.57□□□□□ -1.36
RTN3-208ENST00000537981 CSAG1Q6PB30 78 aa6.57□□□□□ -1.36
RTN3-208ENST00000537981 A8MWP4 228 aa6.57□□□□□ -1.36
RTN3-208ENST00000537981 CASC10Q5T4H9 136 aa6.57□□□□□ -1.36
RTN3-208ENST00000537981 Q6ZR54 194 aa6.57□□□□□ -1.36
RTN3-208ENST00000537981 RTL8CO15255 209 aa6.56□□□□□ -1.36
RTN3-208ENST00000537981 LINC00472Q9H8W2 130 aa6.56□□□□□ -1.36
RTN3-208ENST00000537981 DNAH1Q9P2D7 4330 aa6.56□□□□□ -1.36
RTN3-208ENST00000537981 K7EIL1 84 aa6.56□□□□□ -1.36
RTN3-208ENST00000537981 IGKV2-24A0A0C4DH68 120 aa6.55□□□□□ -1.36
RTN3-208ENST00000537981 MGAM2Q2M2H8 2515 aa6.55□□□□□ -1.36
RTN3-208ENST00000537981 ASB16-AS1Q495Z4 193 aa6.54□□□□□ -1.36
RTN3-208ENST00000537981 RETNLBQ9BQ08 111 aa6.52□□□□□ -1.37
RTN3-208ENST00000537981 A0A087X002 238 aa6.51□□□□□ -1.37
RTN3-208ENST00000537981 CHTF8P0CG12 524 aa6.51□□□□□ -1.37
RTN3-208ENST00000537981 KRTAP10-3P60369 221 aa6.51□□□□□ -1.37
RTN3-208ENST00000537981 NOTCH1P46531 2555 aa6.5□□□□□ -1.37
RTN3-208ENST00000537981 KRTAP21-3Q3LHN1 58 aa6.48□□□□□ -1.37
RTN3-208ENST00000537981 KRTAP11-1Q8IUC1 163 aa6.48□□□□□ -1.37
RTN3-208ENST00000537981 IGLV8-61A0A075B6I0 122 aa6.47□□□□□ -1.37
RTN3-208ENST00000537981 SPART-AS1P0CW21 52 aa6.47□□□□□ -1.37
RTN3-208ENST00000537981 WWC2-AS2Q96NR7 200 aa6.47□□□□□ -1.37
RTN3-208ENST00000537981 Q96NJ1 140 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 178.7 ms