RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 IGLV1-50A0A075B6I6 118 aa3.68□□□□□ -1.82
CSMD1-215ENST00000537824 A0A0A0MQY5 61 aa3.68□□□□□ -1.82
CSMD1-215ENST00000537824 RTL8CO15255 209 aa3.68□□□□□ -1.82
CSMD1-215ENST00000537824 LINC01558Q9Y6Z2 57 aa3.68□□□□□ -1.82
CSMD1-215ENST00000537824 PCNTO95613 3336 aa3.68□□□□□ -1.82
CSMD1-215ENST00000537824 C9orf163Q8N9P6 203 aa3.67□□□□□ -1.82
CSMD1-215ENST00000537824 NBEAQ8NFP9 2946 aa3.67□□□□□ -1.82
CSMD1-215ENST00000537824 DNAH10OSP0CZ25 163 aa3.67□□□□□ -1.82
CSMD1-215ENST00000537824 ZANQ9Y493 2812 aa3.67□□□□□ -1.82
CSMD1-215ENST00000537824 IGLV7-46A0A075B6I9 117 aa3.67□□□□□ -1.82
CSMD1-215ENST00000537824 ANAPC11Q9NYG5 84 aa3.65□□□□□ -1.83
CSMD1-215ENST00000537824 HRES1P13985 223 aa3.64□□□□□ -1.83
CSMD1-215ENST00000537824 C10orf142B7Z368 130 aa3.64□□□□□ -1.83
CSMD1-215ENST00000537824 PRUNE2Q8WUY3 3088 aa3.64□□□□□ -1.83
CSMD1-215ENST00000537824 C9orf92A6NGG3 77 aa3.64□□□□□ -1.83
CSMD1-215ENST00000537824 FRYQ5TBA9 3013 aa3.64□□□□□ -1.83
CSMD1-215ENST00000537824 A0A096LNT2 108 aa3.64□□□□□ -1.83
CSMD1-215ENST00000537824 TNRC18O15417 2968 aaPredicted RBP3.63□□□□□ -1.83
CSMD1-215ENST00000537824 PLA2G2DQ9UNK4 145 aa3.63□□□□□ -1.83
CSMD1-215ENST00000537824 C5orf42Q9H799 3197 aa3.63□□□□□ -1.83
CSMD1-215ENST00000537824 H3BNG1 76 aa3.63□□□□□ -1.83
CSMD1-215ENST00000537824 CNBPP62633 177 aaKnown RBP3.62□□□□□ -1.83
CSMD1-215ENST00000537824 CSNK1G2-AS1Q8NCQ2 148 aa3.62□□□□□ -1.83
CSMD1-215ENST00000537824 KLK9Q2XQG4 91 aa3.61□□□□□ -1.83
CSMD1-215ENST00000537824 SPRR4Q96PI1 79 aa3.61□□□□□ -1.83
CSMD1-215ENST00000537824 KRTAP16-1A8MUX0 517 aa3.61□□□□□ -1.83
CSMD1-215ENST00000537824 GIG44P09565 113 aaPredicted RBP3.6□□□□□ -1.83
CSMD1-215ENST00000537824 PRR34Q9NV39 138 aa3.6□□□□□ -1.83
CSMD1-215ENST00000537824 COL12A1Q99715 3063 aa3.6□□□□□ -1.83
CSMD1-215ENST00000537824 LINC00304Q8N9R0 145 aa3.6□□□□□ -1.83
CSMD1-215ENST00000537824 NBDYA0A0U1RRE5 68 aa3.6□□□□□ -1.83
CSMD1-215ENST00000537824 ZNF575Q86XF7 245 aa3.6□□□□□ -1.83
CSMD1-215ENST00000537824 TLX1NBP0CAT3 122 aa3.6□□□□□ -1.83
CSMD1-215ENST00000537824 ZNF861PO60384 105 aa3.59□□□□□ -1.83
CSMD1-215ENST00000537824 DCHS2Q6V1P9 2916 aa3.59□□□□□ -1.84
CSMD1-215ENST00000537824 FBN2P35556 2912 aa3.58□□□□□ -1.84
CSMD1-215ENST00000537824 LINC00483Q53H64 154 aa3.58□□□□□ -1.84
CSMD1-215ENST00000537824 MMP24-AS1A0A0U1RRL7 71 aa3.57□□□□□ -1.84
CSMD1-215ENST00000537824 IGLV5-37A0A075B6J1 123 aa3.56□□□□□ -1.84
CSMD1-215ENST00000537824 CASC10Q5T4H9 136 aa3.56□□□□□ -1.84
CSMD1-215ENST00000537824 VWFP04275 2813 aa3.56□□□□□ -1.84
CSMD1-215ENST00000537824 A6NN06 94 aa3.56□□□□□ -1.84
CSMD1-215ENST00000537824 LINC00612Q8N6U2 182 aa3.55□□□□□ -1.84
CSMD1-215ENST00000537824 ROMO1P60602 79 aa3.55□□□□□ -1.84
CSMD1-215ENST00000537824 ASB16-AS1Q495Z4 193 aa3.54□□□□□ -1.84
CSMD1-215ENST00000537824 Q5W150 140 aa3.54□□□□□ -1.84
CSMD1-215ENST00000537824 DMXL2Q8TDJ6 3036 aa3.54□□□□□ -1.84
CSMD1-215ENST00000537824 PSORS1C2Q9UIG4 136 aa3.53□□□□□ -1.84
CSMD1-215ENST00000537824 ZZEF1O43149 2961 aa3.53□□□□□ -1.84
CSMD1-215ENST00000537824 Q8NDZ9 215 aa3.53□□□□□ -1.84
CSMD1-215ENST00000537824 C19orf73Q9NVV2 129 aa3.53□□□□□ -1.85
CSMD1-215ENST00000537824 IGLV7-43P04211 117 aa3.52□□□□□ -1.85
CSMD1-215ENST00000537824 COX6B2Q6YFQ2 88 aa3.52□□□□□ -1.85
CSMD1-215ENST00000537824 PKD1L1Q8TDX9 2849 aa3.52□□□□□ -1.85
CSMD1-215ENST00000537824 ADM2Q7Z4H4 148 aa3.52□□□□□ -1.85
CSMD1-215ENST00000537824 CAMK2N1Q7Z7J9 78 aa3.51□□□□□ -1.85
CSMD1-215ENST00000537824 NDUFAF8A1L188 74 aa3.51□□□□□ -1.85
CSMD1-215ENST00000537824 VPS13AQ96RL7 3174 aa3.51□□□□□ -1.85
CSMD1-215ENST00000537824 GOLGB1Q14789 3259 aaKnown RBP3.5□□□□□ -1.85
CSMD1-215ENST00000537824 FREM2Q5SZK8 3169 aa3.5□□□□□ -1.85
CSMD1-215ENST00000537824 H1FX-AS1Q4G0G2 97 aa3.5□□□□□ -1.85
CSMD1-215ENST00000537824 A8MU10 97 aa3.5□□□□□ -1.85
CSMD1-215ENST00000537824 ZCCHC13Q8WW36 166 aaKnown RBP3.49□□□□□ -1.85
CSMD1-215ENST00000537824 MXRA5Q9NR99 2828 aa3.49□□□□□ -1.85
CSMD1-215ENST00000537824 LINC00472Q9H8W2 130 aa3.48□□□□□ -1.85
CSMD1-215ENST00000537824 KRTAP10-11P60412 298 aa3.48□□□□□ -1.85
CSMD1-215ENST00000537824 SPATA8Q6RVD6 105 aa3.47□□□□□ -1.85
CSMD1-215ENST00000537824 A0A087WTM6 91 aa3.47□□□□□ -1.85
CSMD1-215ENST00000537824 KRTAP25-1Q3LHN0 102 aa3.47□□□□□ -1.85
CSMD1-215ENST00000537824 RPL37P61927 97 aaKnown RBP3.46□□□□□ -1.86
CSMD1-215ENST00000537824 S4R3F8 94 aa3.46□□□□□ -1.86
CSMD1-215ENST00000537824 K7EIL1 84 aa3.46□□□□□ -1.86
CSMD1-215ENST00000537824 TENM4Q6N022 2769 aa3.45□□□□□ -1.86
CSMD1-215ENST00000537824 TENM2Q9NT68 2774 aa3.45□□□□□ -1.86
CSMD1-215ENST00000537824 Q6ZR54 194 aa3.44□□□□□ -1.86
CSMD1-215ENST00000537824 SMR3BP02814 79 aaPredicted RBP3.43□□□□□ -1.86
CSMD1-215ENST00000537824 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.42□□□□□ -1.86
CSMD1-215ENST00000537824 COL7A1Q02388 2944 aa3.42□□□□□ -1.86
CSMD1-215ENST00000537824 SPRR1AP35321 89 aa3.42□□□□□ -1.86
CSMD1-215ENST00000537824 KRTAP26-1Q6PEX3 210 aa3.41□□□□□ -1.86
CSMD1-215ENST00000537824 DMXL1Q9Y485 3027 aa3.41□□□□□ -1.86
CSMD1-215ENST00000537824 LAMA1P25391 3075 aa3.4□□□□□ -1.86
CSMD1-215ENST00000537824 KRTAP29-1A8MX34 341 aaPredicted RBP3.4□□□□□ -1.86
CSMD1-215ENST00000537824 HRNRQ86YZ3 2850 aaPredicted RBP3.4□□□□□ -1.87
CSMD1-215ENST00000537824 ADGRG4Q8IZF6 3080 aa3.39□□□□□ -1.87
CSMD1-215ENST00000537824 KRTAP24-1Q3LI83 254 aa3.39□□□□□ -1.87
CSMD1-215ENST00000537824 KRTAP10-3P60369 221 aa3.38□□□□□ -1.87
CSMD1-215ENST00000537824 J3QL48 77 aa3.38□□□□□ -1.87
CSMD1-215ENST00000537824 HTTP42858 3142 aa3.37□□□□□ -1.87
CSMD1-215ENST00000537824 PLAC4Q8WY50 150 aa3.37□□□□□ -1.87
CSMD1-215ENST00000537824 SPRR1BP22528 89 aa3.37□□□□□ -1.87
CSMD1-215ENST00000537824 SEC61BP60468 96 aaKnown RBP3.37□□□□□ -1.87
CSMD1-215ENST00000537824 PANO1I0J062 215 aa3.37□□□□□ -1.87
CSMD1-215ENST00000537824 ATMQ13315 3056 aa3.37□□□□□ -1.87
CSMD1-215ENST00000537824 LCE6AA0A183 80 aa3.36□□□□□ -1.87
CSMD1-215ENST00000537824 R4GN34 69 aa3.36□□□□□ -1.87
CSMD1-215ENST00000537824 CELSR1Q9NYQ6 3014 aa3.36□□□□□ -1.87
CSMD1-215ENST00000537824 WDFY4Q6ZS81 3184 aa3.36□□□□□ -1.87
CSMD1-215ENST00000537824 TNP2Q05952 138 aa3.35□□□□□ -1.87
CSMD1-215ENST00000537824 M0QZ58 72 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms