RNA–Protein interactions for RNA: ENST00000537706.5

USP28-205, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 1,900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-205ENST00000537706 LINC00846Q9NV44 126 aa5.15□□□□□ -1.59
USP28-205ENST00000537706 TRACP01848 142 aa5.14□□□□□ -1.59
USP28-205ENST00000537706 UBE2AP49459 152 aa5.13□□□□□ -1.59
USP28-205ENST00000537706 XP32Q5T750 250 aa5.13□□□□□ -1.59
USP28-205ENST00000537706 SSPOA2VEC9 5147 aa5.13□□□□□ -1.59
USP28-205ENST00000537706 C10orf25Q5T742 122 aa5.13□□□□□ -1.59
USP28-205ENST00000537706 SMIM11BQ8TCY0 68 aa5.13□□□□□ -1.59
USP28-205ENST00000537706 IGLV8-61A0A075B6I0 122 aa5.12□□□□□ -1.59
USP28-205ENST00000537706 UNQ6190/PRO20217Q6UXQ8 127 aa5.12□□□□□ -1.59
USP28-205ENST00000537706 KRTAP7-1Q8IUC3 87 aa5.12□□□□□ -1.59
USP28-205ENST00000537706 H0YGX0 51 aa5.11□□□□□ -1.59
USP28-205ENST00000537706 FAM218AQ96MZ4 157 aa5.11□□□□□ -1.59
USP28-205ENST00000537706 C22orf24Q9Y442 160 aa5.11□□□□□ -1.59
USP28-205ENST00000537706 OR13C6PQ8NH95 151 aa5.11□□□□□ -1.59
USP28-205ENST00000537706 C6orf48Q9UBA6 75 aa5.11□□□□□ -1.59
USP28-205ENST00000537706 NDUFC2-KCTD14E9PQ53 114 aa5.1□□□□□ -1.59
USP28-205ENST00000537706 TEX49A0A1B0GTD5 131 aa5.09□□□□□ -1.59
USP28-205ENST00000537706 TMEM126AQ9H061 195 aa5.09□□□□□ -1.59
USP28-205ENST00000537706 FCGBPQ9Y6R7 5405 aaPredicted RBP5.09□□□□□ -1.59
USP28-205ENST00000537706 C9orf129Q5T035 196 aaKnown RBP5.09□□□□□ -1.6
USP28-205ENST00000537706 KRTAP19-1Q8IUB9 90 aa5.09□□□□□ -1.6
USP28-205ENST00000537706 NCR3O14931 201 aa5.08□□□□□ -1.6
USP28-205ENST00000537706 DNAL4O96015 105 aa5.08□□□□□ -1.6
USP28-205ENST00000537706 Q8NDZ9 215 aa5.08□□□□□ -1.6
USP28-205ENST00000537706 A0A1B0GX51 115 aa5.07□□□□□ -1.6
USP28-205ENST00000537706 MRPL55Q7Z7F7 128 aaKnown RBP5.07□□□□□ -1.6
USP28-205ENST00000537706 FAM240AA0A1B0GVK7 77 aa5.07□□□□□ -1.6
USP28-205ENST00000537706 S100A7L2Q5SY68 101 aa5.07□□□□□ -1.6
USP28-205ENST00000537706 BAALC-AS2P0C853 105 aa5.06□□□□□ -1.6
USP28-205ENST00000537706 PCP4P48539 62 aa5.06□□□□□ -1.6
USP28-205ENST00000537706 PCOTHQ58A44 107 aa5.06□□□□□ -1.6
USP28-205ENST00000537706 C3orf22Q8N5N4 141 aa5.06□□□□□ -1.6
USP28-205ENST00000537706 SIGMAR1Q99720 223 aa5.06□□□□□ -1.6
USP28-205ENST00000537706 USH2AO75445 5202 aa5.06□□□□□ -1.6
USP28-205ENST00000537706 SPINK1P00995 79 aa5.05□□□□□ -1.6
USP28-205ENST00000537706 IGLV6-57P01721 117 aa5.05□□□□□ -1.6
USP28-205ENST00000537706 LINC00167Q96N53 147 aa5.05□□□□□ -1.6
USP28-205ENST00000537706 KRTAP4-16G5E9R7 235 aaPredicted RBP5.05□□□□□ -1.6
USP28-205ENST00000537706 SCGB1A1P11684 91 aa5.04□□□□□ -1.6
USP28-205ENST00000537706 XAGE1AQ9HD64 81 aa5.04□□□□□ -1.6
USP28-205ENST00000537706 VPREB1P12018 145 aa5.03□□□□□ -1.6
USP28-205ENST00000537706 KRTAP6-3Q3LI67 103 aa5.03□□□□□ -1.6
USP28-205ENST00000537706 C6orf99Q4VX62 202 aa5.03□□□□□ -1.6
USP28-205ENST00000537706 ORMDL1Q9P0S3 153 aa5.03□□□□□ -1.6
USP28-205ENST00000537706 SNCGO76070 127 aa5.03□□□□□ -1.6
USP28-205ENST00000537706 TRAV23DV6A0A075B6W5 121 aa5.02□□□□□ -1.61
USP28-205ENST00000537706 TRBV10-3A0A0K0K1G6 114 aa5.02□□□□□ -1.61
USP28-205ENST00000537706 RPL37AP8A6NKH3 93 aa5.02□□□□□ -1.61
USP28-205ENST00000537706 OBSCN-AS1Q96MR7 158 aa5.02□□□□□ -1.61
USP28-205ENST00000537706 M0R378 163 aa5.01□□□□□ -1.61
USP28-205ENST00000537706 ACYP1P07311 99 aa5.01□□□□□ -1.61
USP28-205ENST00000537706 LINC00575Q6W349 94 aa5.01□□□□□ -1.61
USP28-205ENST00000537706 KRTAP13-1Q8IUC0 172 aa5.01□□□□□ -1.61
USP28-205ENST00000537706 TRBV7-6A0A0J9YX20 115 aa5.01□□□□□ -1.61
USP28-205ENST00000537706 MT-ATP8P03928 68 aa5.01□□□□□ -1.61
USP28-205ENST00000537706 Q8NBF4 154 aa5.01□□□□□ -1.61
USP28-205ENST00000537706 SYNE2Q8WXH0 6885 aaKnown RBP5□□□□□ -1.61
USP28-205ENST00000537706 ZNF73O43830 326 aaPredicted RBP4.99□□□□□ -1.61
USP28-205ENST00000537706 hADV29S1A0JD25 119 aa4.99□□□□□ -1.61
USP28-205ENST00000537706 TMEM256-PLSCR3K7ERE1 68 aa4.99□□□□□ -1.61
USP28-205ENST00000537706 RPS29P62273 56 aaKnown RBP4.99□□□□□ -1.61
USP28-205ENST00000537706 C21orf62-AS1Q17RA5 79 aa4.99□□□□□ -1.61
USP28-205ENST00000537706 FAM19A1Q7Z5A9 133 aa4.99□□□□□ -1.61
USP28-205ENST00000537706 H3BQ85 93 aa4.98□□□□□ -1.61
USP28-205ENST00000537706 ELOF1P60002 83 aaKnown RBP4.98□□□□□ -1.61
USP28-205ENST00000537706 KRTAP20-1Q3LI63 56 aa4.98□□□□□ -1.61
USP28-205ENST00000537706 NKAPP1Q8N9T2 125 aa4.98□□□□□ -1.61
USP28-205ENST00000537706 ZNF706Q9Y5V0 76 aaPredicted RBP4.98□□□□□ -1.61
USP28-205ENST00000537706 MACF1Q9UPN3 7388 aaKnown RBP4.98□□□□□ -1.61
USP28-205ENST00000537706 IGLV5-37A0A075B6J1 123 aa4.97□□□□□ -1.61
USP28-205ENST00000537706 COX7BP24311 80 aa4.97□□□□□ -1.61
USP28-205ENST00000537706 C14orf132Q9NPU4 83 aa4.97□□□□□ -1.61
USP28-205ENST00000537706 JMJD7-PLA2G4BH0Y9G9 81 aa4.97□□□□□ -1.61
USP28-205ENST00000537706 PRLHP81277 87 aa4.97□□□□□ -1.61
USP28-205ENST00000537706 GAGE2AQ6NT46 116 aa4.96□□□□□ -1.62
USP28-205ENST00000537706 Q6Q795 121 aa4.95□□□□□ -1.62
USP28-205ENST00000537706 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.95□□□□□ -1.62
USP28-205ENST00000537706 Q6ZQY7 126 aa4.95□□□□□ -1.62
USP28-205ENST00000537706 Q8N377 158 aa4.95□□□□□ -1.62
USP28-205ENST00000537706 KCNQ1DNQ9H478 68 aa4.95□□□□□ -1.62
USP28-205ENST00000537706 GHRHP01286 108 aa4.95□□□□□ -1.62
USP28-205ENST00000537706 TRBV7-7A0A0K0K1E9 115 aa4.94□□□□□ -1.62
USP28-205ENST00000537706 PRYO14603 147 aa4.94□□□□□ -1.62
USP28-205ENST00000537706 LINC00643Q86TS7 51 aa4.94□□□□□ -1.62
USP28-205ENST00000537706 SMCR5Q8TEV8 140 aa4.94□□□□□ -1.62
USP28-205ENST00000537706 CCKP06307 115 aa4.93□□□□□ -1.62
USP28-205ENST00000537706 SPRR4Q96PI1 79 aa4.93□□□□□ -1.62
USP28-205ENST00000537706 HIGD2AQ9BW72 106 aa4.92□□□□□ -1.62
USP28-205ENST00000537706 LOC110117498A0A087WWA1 95 aa4.91□□□□□ -1.62
USP28-205ENST00000537706 A0A1B0GV72 72 aa4.91□□□□□ -1.62
USP28-205ENST00000537706 SPRR1AP35321 89 aa4.91□□□□□ -1.62
USP28-205ENST00000537706 RBM3P98179 157 aaKnown RBP4.91□□□□□ -1.62
USP28-205ENST00000537706 IMUPQ9GZP8 106 aa4.91□□□□□ -1.62
USP28-205ENST00000537706 LAMTOR3Q9UHA4 124 aa4.91□□□□□ -1.62
USP28-205ENST00000537706 PDE6GP18545 87 aa4.9□□□□□ -1.62
USP28-205ENST00000537706 Q6ZQT0 140 aa4.9□□□□□ -1.62
USP28-205ENST00000537706 Q6ZRX8 168 aa4.9□□□□□ -1.62
USP28-205ENST00000537706 DHRS4-AS1Q9P1J3 65 aa4.9□□□□□ -1.62
USP28-205ENST00000537706 FLGP20930 4061 aaPredicted RBP4.9□□□□□ -1.63
USP28-205ENST00000537706 Q6JHZ5 121 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 196 ms