RNA–Protein interactions for RNA: ENST00000537585.1

SRGAP1-203, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 3

Gene SRGAP1, Length 368 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-203ENST00000537585 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.81□□□□□ -2.28
SRGAP1-203ENST00000537585 AHNAKQ09666 5890 aaKnown RBP0.81□□□□□ -2.28
SRGAP1-203ENST00000537585 WNK3Q9BYP7 1800 aa0.8□□□□□ -2.28
SRGAP1-203ENST00000537585 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.8□□□□□ -2.28
SRGAP1-203ENST00000537585 NRXN3Q9Y4C0 1643 aa0.8□□□□□ -2.28
SRGAP1-203ENST00000537585 SMIM31A0A1B0GVY4 71 aa0.8□□□□□ -2.28
SRGAP1-203ENST00000537585 I3L2K1 104 aa0.8□□□□□ -2.28
SRGAP1-203ENST00000537585 NDUFB1O75438 58 aa0.8□□□□□ -2.28
SRGAP1-203ENST00000537585 USMG5Q96IX5 58 aa0.8□□□□□ -2.28
SRGAP1-203ENST00000537585 ATP7BP35670 1465 aa0.8□□□□□ -2.28
SRGAP1-203ENST00000537585 NCOA2Q15596 1464 aa0.8□□□□□ -2.28
SRGAP1-203ENST00000537585 CHD9Q3L8U1 2897 aa0.79□□□□□ -2.28
SRGAP1-203ENST00000537585 MGAQ8IWI9 3026 aa0.79□□□□□ -2.28
SRGAP1-203ENST00000537585 ZC3H13Q5T200 1668 aaKnown RBP0.79□□□□□ -2.28
SRGAP1-203ENST00000537585 TNRC6CQ9HCJ0 1690 aaKnown RBP0.79□□□□□ -2.28
SRGAP1-203ENST00000537585 RPL38P63173 70 aaKnown RBP0.79□□□□□ -2.28
SRGAP1-203ENST00000537585 PRB3Q04118 309 aaPredicted RBP0.79□□□□□ -2.28
SRGAP1-203ENST00000537585 NREPQ16612 68 aa0.79□□□□□ -2.28
SRGAP1-203ENST00000537585 DEFB121Q5J5C9 76 aa0.79□□□□□ -2.28
SRGAP1-203ENST00000537585 HEPN1Q6WQI6 88 aa0.79□□□□□ -2.28
SRGAP1-203ENST00000537585 APLNQ9ULZ1 77 aa0.79□□□□□ -2.28
SRGAP1-203ENST00000537585 MAP1AP78559 2803 aaPredicted RBP0.79□□□□□ -2.28
SRGAP1-203ENST00000537585 STAB2Q8WWQ8 2551 aa0.79□□□□□ -2.28
SRGAP1-203ENST00000537585 ABCC1P33527 1531 aa0.79□□□□□ -2.28
SRGAP1-203ENST00000537585 KMT2AQ03164 3969 aa0.79□□□□□ -2.28
SRGAP1-203ENST00000537585 SAMD9Q5K651 1589 aa0.79□□□□□ -2.28
SRGAP1-203ENST00000537585 POLR1AO95602 1720 aaPredicted RBP0.78□□□□□ -2.28
SRGAP1-203ENST00000537585 MAP2P11137 1827 aaKnown RBP0.78□□□□□ -2.28
SRGAP1-203ENST00000537585 MYH4Q9Y623 1939 aa0.78□□□□□ -2.28
SRGAP1-203ENST00000537585 CPSF4LA6NMK7 179 aaKnown RBP0.78□□□□□ -2.28
SRGAP1-203ENST00000537585 CSPG4Q6UVK1 2322 aa0.78□□□□□ -2.28
SRGAP1-203ENST00000537585 UGGT2Q9NYU1 1516 aa0.78□□□□□ -2.28
SRGAP1-203ENST00000537585 CENPEQ02224 2701 aa0.78□□□□□ -2.29
SRGAP1-203ENST00000537585 C5P01031 1676 aa0.78□□□□□ -2.29
SRGAP1-203ENST00000537585 ITSN2Q9NZM3 1697 aa0.78□□□□□ -2.29
SRGAP1-203ENST00000537585 ANK2Q01484 3957 aa0.78□□□□□ -2.29
SRGAP1-203ENST00000537585 UBR1Q8IWV7 1749 aa0.78□□□□□ -2.29
SRGAP1-203ENST00000537585 PPLO60437 1756 aa0.78□□□□□ -2.29
SRGAP1-203ENST00000537585 HECTD4Q9Y4D8 3996 aa0.77□□□□□ -2.29
SRGAP1-203ENST00000537585 K7EQZ3 153 aa0.77□□□□□ -2.29
SRGAP1-203ENST00000537585 COX8AP10176 69 aa0.77□□□□□ -2.29
SRGAP1-203ENST00000537585 KRTAP20-1Q3LI63 56 aa0.77□□□□□ -2.29
SRGAP1-203ENST00000537585 S100ZQ8WXG8 99 aa0.77□□□□□ -2.29
SRGAP1-203ENST00000537585 CLIP1P30622 1438 aa0.77□□□□□ -2.29
SRGAP1-203ENST00000537585 DUOX2Q9NRD8 1548 aa0.77□□□□□ -2.29
SRGAP1-203ENST00000537585 PAPPAQ13219 1627 aa0.77□□□□□ -2.29
SRGAP1-203ENST00000537585 XRN1Q8IZH2 1706 aaKnown RBP0.77□□□□□ -2.29
SRGAP1-203ENST00000537585 FMN2Q9NZ56 1722 aa0.77□□□□□ -2.29
SRGAP1-203ENST00000537585 KMT2DO14686 5537 aa0.76□□□□□ -2.29
SRGAP1-203ENST00000537585 MAST1Q9Y2H9 1570 aa0.76□□□□□ -2.29
SRGAP1-203ENST00000537585 PRKDCP78527 4128 aaKnown RBP0.76□□□□□ -2.29
SRGAP1-203ENST00000537585 COX6B1P14854 86 aa0.76□□□□□ -2.29
SRGAP1-203ENST00000537585 KLK9Q2XQG4 91 aa0.76□□□□□ -2.29
SRGAP1-203ENST00000537585 DMBT1Q9UGM3 2413 aaPredicted RBP0.76□□□□□ -2.29
SRGAP1-203ENST00000537585 NBASA2RRP1 2371 aa0.76□□□□□ -2.29
SRGAP1-203ENST00000537585 SACSQ9NZJ4 4579 aa0.76□□□□□ -2.29
SRGAP1-203ENST00000537585 KDM3BQ7LBC6 1761 aa0.75□□□□□ -2.29
SRGAP1-203ENST00000537585 PKD1L3Q7Z443 1732 aa0.75□□□□□ -2.29
SRGAP1-203ENST00000537585 CCDC180Q9P1Z9 1646 aa0.75□□□□□ -2.29
SRGAP1-203ENST00000537585 DNMBPQ6XZF7 1577 aa0.75□□□□□ -2.29
SRGAP1-203ENST00000537585 UGGT1Q9NYU2 1555 aa0.75□□□□□ -2.29
SRGAP1-203ENST00000537585 ATXN8Q156A1 80 aa0.75□□□□□ -2.29
SRGAP1-203ENST00000537585 CRYBG1Q9Y4K1 1723 aa0.75□□□□□ -2.29
SRGAP1-203ENST00000537585 IQGAP1P46940 1657 aa0.75□□□□□ -2.29
SRGAP1-203ENST00000537585 LAMC1P11047 1609 aa0.75□□□□□ -2.29
SRGAP1-203ENST00000537585 TIAM1Q13009 1591 aa0.74□□□□□ -2.29
SRGAP1-203ENST00000537585 NKTRP30414 1462 aaKnown RBP0.74□□□□□ -2.29
SRGAP1-203ENST00000537585 CCDC141Q6ZP82 1450 aa0.74□□□□□ -2.29
SRGAP1-203ENST00000537585 LAMA1P25391 3075 aa0.74□□□□□ -2.29
SRGAP1-203ENST00000537585 CACNA1EQ15878 2313 aa0.74□□□□□ -2.29
SRGAP1-203ENST00000537585 NDUFA4O00483 81 aa0.74□□□□□ -2.29
SRGAP1-203ENST00000537585 MRPL34Q9BQ48 92 aaKnown RBP0.74□□□□□ -2.29
SRGAP1-203ENST00000537585 GOLGA4Q13439 2230 aaKnown RBP0.74□□□□□ -2.29
SRGAP1-203ENST00000537585 ACANP16112 2415 aa0.74□□□□□ -2.29
SRGAP1-203ENST00000537585 ASXL1Q8IXJ9 1541 aa0.74□□□□□ -2.29
SRGAP1-203ENST00000537585 DNAH1Q9P2D7 4330 aa0.73□□□□□ -2.29
SRGAP1-203ENST00000537585 SONP18583 2426 aaKnown RBP0.73□□□□□ -2.29
SRGAP1-203ENST00000537585 SPRR1BP22528 89 aa0.73□□□□□ -2.29
SRGAP1-203ENST00000537585 ENHOQ6UWT2 76 aa0.73□□□□□ -2.29
SRGAP1-203ENST00000537585 DEFB105AQ8NG35 78 aa0.73□□□□□ -2.29
SRGAP1-203ENST00000537585 MUC5BQ9HC84 5762 aaPredicted RBP0.73□□□□□ -2.29
SRGAP1-203ENST00000537585 COL7A1Q02388 2944 aa0.73□□□□□ -2.29
SRGAP1-203ENST00000537585 CCDC88BA6NC98 1476 aa0.73□□□□□ -2.29
SRGAP1-203ENST00000537585 SCN11AQ9UI33 1791 aa0.73□□□□□ -2.29
SRGAP1-203ENST00000537585 DYNC2H1Q8NCM8 4307 aaKnown RBP0.73□□□□□ -2.29
SRGAP1-203ENST00000537585 DEPDC5O75140 1603 aa0.72□□□□□ -2.29
SRGAP1-203ENST00000537585 SAMD9LQ8IVG5 1584 aa0.72□□□□□ -2.29
SRGAP1-203ENST00000537585 DSTQ03001 7570 aaKnown RBP0.72□□□□□ -2.29
SRGAP1-203ENST00000537585 PLXNB2O15031 1838 aa0.72□□□□□ -2.29
SRGAP1-203ENST00000537585 APC2O95996 2303 aa0.72□□□□□ -2.29
SRGAP1-203ENST00000537585 RGPD2P0DJD1 1756 aa0.72□□□□□ -2.29
SRGAP1-203ENST00000537585 ZNF469Q96JG9 3925 aaPredicted RBP0.72□□□□□ -2.29
SRGAP1-203ENST00000537585 A0A0G2JMZ2 1700 aa0.72□□□□□ -2.29
SRGAP1-203ENST00000537585 LRRIQ1Q96JM4 1722 aa0.72□□□□□ -2.29
SRGAP1-203ENST00000537585 PIK3C2BO00750 1634 aa0.71□□□□□ -2.3
SRGAP1-203ENST00000537585 IQGAP3Q86VI3 1631 aa0.71□□□□□ -2.3
SRGAP1-203ENST00000537585 TRRAPQ9Y4A5 3859 aa0.71□□□□□ -2.3
SRGAP1-203ENST00000537585 MUC12Q9UKN1 5478 aa0.71□□□□□ -2.3
SRGAP1-203ENST00000537585 CFAP74Q9C0B2 1584 aa0.71□□□□□ -2.3
SRGAP1-203ENST00000537585 CSMD3Q7Z407 3707 aa0.71□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms