RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 A0A1B0GU69 56 aa5.31□□□□□ -1.56
SRGAP1-202ENST00000537556 USP9XQ93008 2570 aaPredicted RBP5.31□□□□□ -1.56
SRGAP1-202ENST00000537556 MIR22HGQ0VDD5 57 aa5.31□□□□□ -1.56
SRGAP1-202ENST00000537556 LRRK2Q5S007 2527 aa5.31□□□□□ -1.56
SRGAP1-202ENST00000537556 USP9YO00507 2555 aaPredicted RBP5.31□□□□□ -1.56
SRGAP1-202ENST00000537556 UQCR11O14957 56 aa5.31□□□□□ -1.56
SRGAP1-202ENST00000537556 HIVEP3Q5T1R4 2406 aa5.3□□□□□ -1.56
SRGAP1-202ENST00000537556 FLNBO75369 2602 aaKnown RBP5.3□□□□□ -1.56
SRGAP1-202ENST00000537556 AKAP9Q99996 3911 aa5.3□□□□□ -1.56
SRGAP1-202ENST00000537556 ACYP2P14621 99 aa5.3□□□□□ -1.56
SRGAP1-202ENST00000537556 KRTAP26-1Q6PEX3 210 aa5.29□□□□□ -1.56
SRGAP1-202ENST00000537556 TLX1NBP0CAT3 122 aa5.29□□□□□ -1.56
SRGAP1-202ENST00000537556 MYO9AB2RTY4 2548 aa5.28□□□□□ -1.56
SRGAP1-202ENST00000537556 CUBNO60494 3623 aa5.28□□□□□ -1.56
SRGAP1-202ENST00000537556 IGHV6-1A0A0B4J1U7 121 aa5.28□□□□□ -1.56
SRGAP1-202ENST00000537556 HECTD1Q9ULT8 2610 aa5.28□□□□□ -1.56
SRGAP1-202ENST00000537556 REG3GQ6UW15 175 aa5.28□□□□□ -1.56
SRGAP1-202ENST00000537556 FN1P02751 2386 aaKnown RBP5.27□□□□□ -1.57
SRGAP1-202ENST00000537556 ROMO1P60602 79 aa5.27□□□□□ -1.57
SRGAP1-202ENST00000537556 UNC79Q9P2D8 2635 aa5.27□□□□□ -1.57
SRGAP1-202ENST00000537556 HTN3P15516 51 aa5.26□□□□□ -1.57
SRGAP1-202ENST00000537556 MAST4O15021 2626 aa5.26□□□□□ -1.57
SRGAP1-202ENST00000537556 NF1P21359 2839 aa5.25□□□□□ -1.57
SRGAP1-202ENST00000537556 UTP20O75691 2785 aaKnown RBP5.25□□□□□ -1.57
SRGAP1-202ENST00000537556 OTOGQ6ZRI0 2925 aa5.25□□□□□ -1.57
SRGAP1-202ENST00000537556 DEFB4AO15263 64 aa5.25□□□□□ -1.57
SRGAP1-202ENST00000537556 FAM168BA1KXE4 195 aa5.24□□□□□ -1.57
SRGAP1-202ENST00000537556 NBEAL2Q6ZNJ1 2754 aa5.24□□□□□ -1.57
SRGAP1-202ENST00000537556 TEX15Q9BXT5 2789 aa5.23□□□□□ -1.57
SRGAP1-202ENST00000537556 SPART-AS1P0CW21 52 aa5.23□□□□□ -1.57
SRGAP1-202ENST00000537556 MXRA5Q9NR99 2828 aa5.23□□□□□ -1.57
SRGAP1-202ENST00000537556 OXLD1Q5BKU9 147 aa5.22□□□□□ -1.57
SRGAP1-202ENST00000537556 C8orf17Q9NRJ1 99 aa5.22□□□□□ -1.57
SRGAP1-202ENST00000537556 ZNF861PO60384 105 aa5.22□□□□□ -1.57
SRGAP1-202ENST00000537556 MAPK1IP1LQ8NDC0 245 aa5.21□□□□□ -1.58
SRGAP1-202ENST00000537556 CELSR2Q9HCU4 2923 aa5.2□□□□□ -1.58
SRGAP1-202ENST00000537556 DEFB135Q30KP9 77 aa5.2□□□□□ -1.58
SRGAP1-202ENST00000537556 NAV2Q8IVL1 2488 aa5.2□□□□□ -1.58
SRGAP1-202ENST00000537556 MRPL34Q9BQ48 92 aaKnown RBP5.19□□□□□ -1.58
SRGAP1-202ENST00000537556 NIPBLQ6KC79 2804 aaeCLIP5.19□□□□□ -1.58
SRGAP1-202ENST00000537556 ITPR2Q14571 2701 aa5.19□□□□□ -1.58
SRGAP1-202ENST00000537556 KRTAP25-1Q3LHN0 102 aa5.19□□□□□ -1.58
SRGAP1-202ENST00000537556 KRTAP7-1Q8IUC3 87 aa5.19□□□□□ -1.58
SRGAP1-202ENST00000537556 PDZD2O15018 2839 aa5.18□□□□□ -1.58
SRGAP1-202ENST00000537556 ABCA12Q86UK0 2595 aa5.18□□□□□ -1.58
SRGAP1-202ENST00000537556 SPRR1BP22528 89 aa5.18□□□□□ -1.58
SRGAP1-202ENST00000537556 PRLHP81277 87 aa5.18□□□□□ -1.58
SRGAP1-202ENST00000537556 DMAC1Q96GE9 116 aa5.17□□□□□ -1.58
SRGAP1-202ENST00000537556 CDK2AP2O75956 126 aa5.16□□□□□ -1.58
SRGAP1-202ENST00000537556 FBN2P35556 2912 aa5.16□□□□□ -1.58
SRGAP1-202ENST00000537556 CENPEQ02224 2701 aa5.16□□□□□ -1.58
SRGAP1-202ENST00000537556 A0A1B0GVX0 72 aa5.16□□□□□ -1.58
SRGAP1-202ENST00000537556 H3BNG1 76 aa5.15□□□□□ -1.58
SRGAP1-202ENST00000537556 ALMS1Q8TCU4 4167 aa5.15□□□□□ -1.59
SRGAP1-202ENST00000537556 LINC01556Q5JQF7 62 aa5.15□□□□□ -1.59
SRGAP1-202ENST00000537556 KRTAP21-3Q3LHN1 58 aa5.14□□□□□ -1.59
SRGAP1-202ENST00000537556 ZANQ9Y493 2812 aa5.14□□□□□ -1.59
SRGAP1-202ENST00000537556 F8P00451 2351 aa5.13□□□□□ -1.59
SRGAP1-202ENST00000537556 Q96NJ1 140 aa5.13□□□□□ -1.59
SRGAP1-202ENST00000537556 TENM2Q9NT68 2774 aa5.12□□□□□ -1.59
SRGAP1-202ENST00000537556 NOTCH2NLQ7Z3S9 236 aa5.12□□□□□ -1.59
SRGAP1-202ENST00000537556 A0A096LNI7 61 aa5.11□□□□□ -1.59
SRGAP1-202ENST00000537556 KRTAP10-9P60411 292 aa5.11□□□□□ -1.59
SRGAP1-202ENST00000537556 IGLV7-43P04211 117 aa5.1□□□□□ -1.59
SRGAP1-202ENST00000537556 SONP18583 2426 aaKnown RBP5.1□□□□□ -1.59
SRGAP1-202ENST00000537556 DEFB113Q30KQ7 82 aa5.1□□□□□ -1.59
SRGAP1-202ENST00000537556 NOTCH2Q04721 2471 aa5.09□□□□□ -1.59
SRGAP1-202ENST00000537556 A0A0A0MQY5 61 aa5.09□□□□□ -1.6
SRGAP1-202ENST00000537556 IGLV5-52A0A0A0MRZ9 124 aa5.09□□□□□ -1.6
SRGAP1-202ENST00000537556 K7EIL1 84 aa5.09□□□□□ -1.6
SRGAP1-202ENST00000537556 KRTAP13-3Q3SY46 172 aa5.07□□□□□ -1.6
SRGAP1-202ENST00000537556 Q5W150 140 aa5.07□□□□□ -1.6
SRGAP1-202ENST00000537556 P0C880 135 aa5.07□□□□□ -1.6
SRGAP1-202ENST00000537556 A8MUU9 505 aa5.07□□□□□ -1.6
SRGAP1-202ENST00000537556 SETD2Q9BYW2 2564 aaPredicted RBP5.06□□□□□ -1.6
SRGAP1-202ENST00000537556 KRTAP1-3Q8IUG1 177 aa5.06□□□□□ -1.6
SRGAP1-202ENST00000537556 HIVEP2P31629 2446 aa5.06□□□□□ -1.6
SRGAP1-202ENST00000537556 HIVEP1P15822 2718 aa5.06□□□□□ -1.6
SRGAP1-202ENST00000537556 DNAH10OSP0CZ25 163 aa5.05□□□□□ -1.6
SRGAP1-202ENST00000537556 LINC00483Q53H64 154 aa5.05□□□□□ -1.6
SRGAP1-202ENST00000537556 MTORP42345 2549 aa5.03□□□□□ -1.6
SRGAP1-202ENST00000537556 LINC00304Q8N9R0 145 aa5.03□□□□□ -1.6
SRGAP1-202ENST00000537556 POLQO75417 2590 aa5.02□□□□□ -1.61
SRGAP1-202ENST00000537556 ITPR3Q14573 2671 aa5.01□□□□□ -1.61
SRGAP1-202ENST00000537556 IGLV9-49A0A0B4J1Y8 123 aa5.01□□□□□ -1.61
SRGAP1-202ENST00000537556 CCDC168Q8NDH2 2452 aa5.01□□□□□ -1.61
SRGAP1-202ENST00000537556 CASC10Q5T4H9 136 aa5.01□□□□□ -1.61
SRGAP1-202ENST00000537556 FAM229AH3BQW9 127 aa5□□□□□ -1.61
SRGAP1-202ENST00000537556 ZNF469Q96JG9 3925 aaPredicted RBP5□□□□□ -1.61
SRGAP1-202ENST00000537556 LY6G6CO95867 125 aa4.99□□□□□ -1.61
SRGAP1-202ENST00000537556 FLNAP21333 2647 aaKnown RBP4.98□□□□□ -1.61
SRGAP1-202ENST00000537556 SRRM2Q9UQ35 2752 aaKnown RBP4.97□□□□□ -1.61
SRGAP1-202ENST00000537556 KRTAP16-1A8MUX0 517 aa4.97□□□□□ -1.61
SRGAP1-202ENST00000537556 IGKV2-30P06310 120 aa4.97□□□□□ -1.61
SRGAP1-202ENST00000537556 NSD1Q96L73 2696 aaPredicted RBP4.97□□□□□ -1.61
SRGAP1-202ENST00000537556 KRTAP1-1Q07627 177 aa4.96□□□□□ -1.61
SRGAP1-202ENST00000537556 TEP1Q99973 2627 aaKnown RBP4.96□□□□□ -1.62
SRGAP1-202ENST00000537556 K7ERS5 55 aa4.95□□□□□ -1.62
SRGAP1-202ENST00000537556 KRTAP11-1Q8IUC1 163 aa4.95□□□□□ -1.62
SRGAP1-202ENST00000537556 INAFM1C9JVW0 142 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms