RNA–Protein interactions for RNA: ENST00000536212.1

VPS33A-203, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-203ENST00000536212 FAM168BA1KXE4 195 aa3.63□□□□□ -1.83
VPS33A-203ENST00000536212 RPL37AP8A6NKH3 93 aa3.63□□□□□ -1.83
VPS33A-203ENST00000536212 C3orf84H3BNL1 204 aa3.63□□□□□ -1.83
VPS33A-203ENST00000536212 C1orf137Q5JT78 98 aa3.63□□□□□ -1.83
VPS33A-203ENST00000536212 SMIM29Q86T20 159 aa3.63□□□□□ -1.83
VPS33A-203ENST00000536212 ST20-AS1Q8NBB2 130 aa3.63□□□□□ -1.83
VPS33A-203ENST00000536212 LRRK2Q5S007 2527 aa3.63□□□□□ -1.83
VPS33A-203ENST00000536212 IGLV8-61A0A075B6I0 122 aa3.62□□□□□ -1.83
VPS33A-203ENST00000536212 A0A087X002 238 aa3.62□□□□□ -1.83
VPS33A-203ENST00000536212 DSCR10P59022 87 aa3.62□□□□□ -1.83
VPS33A-203ENST00000536212 CYP4F30PQ9H0H9 118 aa3.62□□□□□ -1.83
VPS33A-203ENST00000536212 MYO18BQ8IUG5 2567 aa3.62□□□□□ -1.83
VPS33A-203ENST00000536212 EPG5Q9HCE0 2579 aa3.62□□□□□ -1.83
VPS33A-203ENST00000536212 JMJD1CQ15652 2540 aa3.61□□□□□ -1.83
VPS33A-203ENST00000536212 IGKV2-30P06310 120 aa3.61□□□□□ -1.83
VPS33A-203ENST00000536212 ASB16-AS1Q495Z4 193 aa3.61□□□□□ -1.83
VPS33A-203ENST00000536212 LCE1AQ5T7P2 110 aa3.61□□□□□ -1.83
VPS33A-203ENST00000536212 REG3GQ6UW15 175 aa3.61□□□□□ -1.83
VPS33A-203ENST00000536212 ZCCHC13Q8WW36 166 aaKnown RBP3.61□□□□□ -1.83
VPS33A-203ENST00000536212 LINC00474Q9P2X8 69 aa3.61□□□□□ -1.83
VPS33A-203ENST00000536212 FLNAP21333 2647 aaKnown RBP3.61□□□□□ -1.83
VPS33A-203ENST00000536212 SETXQ7Z333 2677 aaKnown RBP3.61□□□□□ -1.83
VPS33A-203ENST00000536212 CCDC168Q8NDH2 2452 aa3.6□□□□□ -1.83
VPS33A-203ENST00000536212 ZFYVE26Q68DK2 2539 aa3.6□□□□□ -1.83
VPS33A-203ENST00000536212 A8MUN3 132 aa3.6□□□□□ -1.83
VPS33A-203ENST00000536212 KRTAP10-6P60371 365 aaPredicted RBP3.6□□□□□ -1.83
VPS33A-203ENST00000536212 ACANP16112 2415 aa3.6□□□□□ -1.83
VPS33A-203ENST00000536212 C16orf90A8MZG2 172 aa3.59□□□□□ -1.83
VPS33A-203ENST00000536212 SPRR1BP22528 89 aa3.59□□□□□ -1.83
VPS33A-203ENST00000536212 MP68P56378 58 aa3.59□□□□□ -1.83
VPS33A-203ENST00000536212 CNBPP62633 177 aaKnown RBP3.59□□□□□ -1.83
VPS33A-203ENST00000536212 A0A1W2PNN7 141 aa3.58□□□□□ -1.84
VPS33A-203ENST00000536212 IGFL1Q6UW32 110 aa3.58□□□□□ -1.84
VPS33A-203ENST00000536212 PRAC1Q96KF2 57 aa3.58□□□□□ -1.84
VPS33A-203ENST00000536212 LIMD2Q9BT23 127 aa3.58□□□□□ -1.84
VPS33A-203ENST00000536212 HIGD2AQ9BW72 106 aa3.58□□□□□ -1.84
VPS33A-203ENST00000536212 A0A096LNI7 61 aa3.57□□□□□ -1.84
VPS33A-203ENST00000536212 HCG22E2RYF7 251 aa3.57□□□□□ -1.84
VPS33A-203ENST00000536212 H0Y9J4 135 aa3.57□□□□□ -1.84
VPS33A-203ENST00000536212 K7EIL1 84 aa3.57□□□□□ -1.84
VPS33A-203ENST00000536212 K7EQZ3 153 aa3.57□□□□□ -1.84
VPS33A-203ENST00000536212 CUBNO60494 3623 aa3.57□□□□□ -1.84
VPS33A-203ENST00000536212 NOTCH2NLQ7Z3S9 236 aa3.56□□□□□ -1.84
VPS33A-203ENST00000536212 KRTAP1-5Q9BYS1 174 aa3.56□□□□□ -1.84
VPS33A-203ENST00000536212 hDV103S1A0JD37 113 aa3.55□□□□□ -1.84
VPS33A-203ENST00000536212 PSCAO43653 123 aa3.55□□□□□ -1.84
VPS33A-203ENST00000536212 PRLHP81277 87 aa3.55□□□□□ -1.84
VPS33A-203ENST00000536212 FAM229BQ4G0N7 80 aa3.55□□□□□ -1.84
VPS33A-203ENST00000536212 C14orf177Q52M58 125 aa3.55□□□□□ -1.84
VPS33A-203ENST00000536212 MTORP42345 2549 aa3.54□□□□□ -1.84
VPS33A-203ENST00000536212 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.54□□□□□ -1.84
VPS33A-203ENST00000536212 A6NN06 94 aa3.54□□□□□ -1.84
VPS33A-203ENST00000536212 LINC01554Q52M75 96 aa3.54□□□□□ -1.84
VPS33A-203ENST00000536212 KRTAP11-1Q8IUC1 163 aa3.54□□□□□ -1.84
VPS33A-203ENST00000536212 APLNQ9ULZ1 77 aa3.54□□□□□ -1.84
VPS33A-203ENST00000536212 A0A087WSZ3 146 aa3.53□□□□□ -1.84
VPS33A-203ENST00000536212 A0A0G2JQZ4 141 aa3.53□□□□□ -1.84
VPS33A-203ENST00000536212 H3BPC8 53 aa3.53□□□□□ -1.84
VPS33A-203ENST00000536212 PSPHP1O15172 72 aa3.53□□□□□ -1.84
VPS33A-203ENST00000536212 PRB2P02812 416 aaPredicted RBP3.53□□□□□ -1.84
VPS33A-203ENST00000536212 NBPF19A0A087WUL8 3843 aa3.52□□□□□ -1.85
VPS33A-203ENST00000536212 MAP1AP78559 2803 aaPredicted RBP3.52□□□□□ -1.85
VPS33A-203ENST00000536212 IGKV2-24A0A0C4DH68 120 aa3.52□□□□□ -1.85
VPS33A-203ENST00000536212 NDUFB1O75438 58 aa3.52□□□□□ -1.85
VPS33A-203ENST00000536212 C9orf163Q8N9P6 203 aa3.52□□□□□ -1.85
VPS33A-203ENST00000536212 LINC00472Q9H8W2 130 aa3.52□□□□□ -1.85
VPS33A-203ENST00000536212 NOTCH2Q04721 2471 aa3.52□□□□□ -1.85
VPS33A-203ENST00000536212 TRAV22A0A0B4J277 110 aa3.51□□□□□ -1.85
VPS33A-203ENST00000536212 LRCOL1A6NCL2 159 aa3.51□□□□□ -1.85
VPS33A-203ENST00000536212 A8MWP4 228 aa3.51□□□□□ -1.85
VPS33A-203ENST00000536212 KRTAP13-1Q8IUC0 172 aa3.51□□□□□ -1.85
VPS33A-203ENST00000536212 C1orf64Q8NEQ6 169 aa3.51□□□□□ -1.85
VPS33A-203ENST00000536212 CDC42SE1Q9NRR8 79 aa3.51□□□□□ -1.85
VPS33A-203ENST00000536212 KMT2BQ9UMN6 2715 aaPredicted RBP3.5□□□□□ -1.85
VPS33A-203ENST00000536212 FASNP49327 2511 aaKnown RBP3.5□□□□□ -1.85
VPS33A-203ENST00000536212 CHTF8P0CG12 524 aa3.5□□□□□ -1.85
VPS33A-203ENST00000536212 LINC00313P59037 77 aa3.5□□□□□ -1.85
VPS33A-203ENST00000536212 WFDC13Q8IUB5 93 aa3.5□□□□□ -1.85
VPS33A-203ENST00000536212 Q8N9P0 234 aaPredicted RBP3.5□□□□□ -1.85
VPS33A-203ENST00000536212 SPANXA2-OT1Q8N9U9 137 aa3.5□□□□□ -1.85
VPS33A-203ENST00000536212 NF1P21359 2839 aa3.5□□□□□ -1.85
VPS33A-203ENST00000536212 UNC79Q9P2D8 2635 aa3.5□□□□□ -1.85
VPS33A-203ENST00000536212 RPL37AP61513 92 aaKnown RBP3.49□□□□□ -1.85
VPS33A-203ENST00000536212 DEFB116Q30KQ4 102 aa3.49□□□□□ -1.85
VPS33A-203ENST00000536212 CASC2Q6XLA1 102 aa3.49□□□□□ -1.85
VPS33A-203ENST00000536212 Q6ZRN7 208 aaPredicted RBP3.49□□□□□ -1.85
VPS33A-203ENST00000536212 UBE2DNLQ8IWF7 75 aa3.49□□□□□ -1.85
VPS33A-203ENST00000536212 B9D2Q9BPU9 175 aa3.49□□□□□ -1.85
VPS33A-203ENST00000536212 CENPEQ02224 2701 aa3.48□□□□□ -1.85
VPS33A-203ENST00000536212 SETD2Q9BYW2 2564 aaPredicted RBP3.48□□□□□ -1.85
VPS33A-203ENST00000536212 CHKB-CPT1BH3BT56 60 aa3.48□□□□□ -1.85
VPS33A-203ENST00000536212 TENM4Q6N022 2769 aa3.47□□□□□ -1.85
VPS33A-203ENST00000536212 NBDYA0A0U1RRE5 68 aa3.47□□□□□ -1.85
VPS33A-203ENST00000536212 MMP24-AS1A0A0U1RRL7 71 aa3.47□□□□□ -1.85
VPS33A-203ENST00000536212 H0Y9P7 68 aa3.47□□□□□ -1.85
VPS33A-203ENST00000536212 LINC00483Q53H64 154 aa3.47□□□□□ -1.85
VPS33A-203ENST00000536212 LCE1EQ5T753 118 aa3.47□□□□□ -1.85
VPS33A-203ENST00000536212 SPTSSBQ8NFR3 76 aa3.47□□□□□ -1.85
VPS33A-203ENST00000536212 LINC00208Q96KT6 92 aa3.47□□□□□ -1.85
VPS33A-203ENST00000536212 NBEAL2Q6ZNJ1 2754 aa3.46□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms