RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 MUSTN1Q8IVN3 82 aa5.79□□□□□ -1.48
CSDE1-217ENST00000534699 A6NDN8 102 aa5.78□□□□□ -1.48
CSDE1-217ENST00000534699 OCIAD2Q56VL3 154 aa5.78□□□□□ -1.48
CSDE1-217ENST00000534699 LCE2DQ5TA82 110 aaPredicted RBP5.78□□□□□ -1.48
CSDE1-217ENST00000534699 Q6JHZ5 121 aa5.77□□□□□ -1.49
CSDE1-217ENST00000534699 K7ERU9 68 aa5.77□□□□□ -1.49
CSDE1-217ENST00000534699 LPAP08519 4548 aa5.76□□□□□ -1.49
CSDE1-217ENST00000534699 IGLV8-61A0A075B6I0 122 aa5.76□□□□□ -1.49
CSDE1-217ENST00000534699 LINC01547P58512 204 aaPredicted RBP5.76□□□□□ -1.49
CSDE1-217ENST00000534699 C2orf91Q6ZV80 131 aa5.76□□□□□ -1.49
CSDE1-217ENST00000534699 GTF2H5Q6ZYL4 71 aa5.76□□□□□ -1.49
CSDE1-217ENST00000534699 SMIM29Q86T20 159 aa5.76□□□□□ -1.49
CSDE1-217ENST00000534699 TTTY13Q9BZ97 58 aa5.76□□□□□ -1.49
CSDE1-217ENST00000534699 TCL1BO95988 128 aa5.75□□□□□ -1.49
CSDE1-217ENST00000534699 C9orf118A6NHY6 69 aa5.75□□□□□ -1.49
CSDE1-217ENST00000534699 GHRHP01286 108 aa5.75□□□□□ -1.49
CSDE1-217ENST00000534699 PCP2Q8IVA1 136 aa5.75□□□□□ -1.49
CSDE1-217ENST00000534699 SMIM11BQ8TCY0 68 aa5.75□□□□□ -1.49
CSDE1-217ENST00000534699 F8WEM9 126 aa5.74□□□□□ -1.49
CSDE1-217ENST00000534699 HSD52Q0P140 79 aa5.74□□□□□ -1.49
CSDE1-217ENST00000534699 VPS25Q9BRG1 176 aa5.74□□□□□ -1.49
CSDE1-217ENST00000534699 SNCGO76070 127 aa5.74□□□□□ -1.49
CSDE1-217ENST00000534699 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.74□□□□□ -1.49
CSDE1-217ENST00000534699 LINC00575Q6W349 94 aa5.73□□□□□ -1.49
CSDE1-217ENST00000534699 K7EP34 96 aa5.72□□□□□ -1.49
CSDE1-217ENST00000534699 HIGD1BQ9P298 99 aa5.72□□□□□ -1.49
CSDE1-217ENST00000534699 hADV29S1A0JD25 119 aa5.71□□□□□ -1.49
CSDE1-217ENST00000534699 DEFB105AQ8NG35 78 aa5.71□□□□□ -1.5
CSDE1-217ENST00000534699 A0A1B0GX51 115 aa5.7□□□□□ -1.5
CSDE1-217ENST00000534699 H3BQ85 93 aa5.7□□□□□ -1.5
CSDE1-217ENST00000534699 H0YGX0 51 aa5.69□□□□□ -1.5
CSDE1-217ENST00000534699 A0A1W2PPM0 123 aa5.69□□□□□ -1.5
CSDE1-217ENST00000534699 C1orf195Q5TG92 126 aa5.69□□□□□ -1.5
CSDE1-217ENST00000534699 Q1RN00 199 aa5.68□□□□□ -1.5
CSDE1-217ENST00000534699 H3BUT2 72 aa5.68□□□□□ -1.5
CSDE1-217ENST00000534699 FABP2P12104 132 aa5.68□□□□□ -1.5
CSDE1-217ENST00000534699 Q6Q795 121 aa5.68□□□□□ -1.5
CSDE1-217ENST00000534699 CLEC2BQ92478 149 aa5.68□□□□□ -1.5
CSDE1-217ENST00000534699 A0A0B4J2C4 111 aa5.67□□□□□ -1.5
CSDE1-217ENST00000534699 HIST1H4GQ99525 98 aa5.67□□□□□ -1.5
CSDE1-217ENST00000534699 SPCS1Q9Y6A9 102 aa5.67□□□□□ -1.5
CSDE1-217ENST00000534699 TRBV7-7A0A0K0K1E9 115 aa5.65□□□□□ -1.5
CSDE1-217ENST00000534699 SCGB1A1P11684 91 aa5.65□□□□□ -1.5
CSDE1-217ENST00000534699 HRCT1Q6UXD1 115 aa5.65□□□□□ -1.51
CSDE1-217ENST00000534699 SS18L2Q9UHA2 77 aa5.65□□□□□ -1.51
CSDE1-217ENST00000534699 A6NJY4 79 aa5.64□□□□□ -1.51
CSDE1-217ENST00000534699 RPL37P61927 97 aaKnown RBP5.64□□□□□ -1.51
CSDE1-217ENST00000534699 Q6ZQY7 126 aa5.64□□□□□ -1.51
CSDE1-217ENST00000534699 CFC1BP0CG36 223 aa5.64□□□□□ -1.51
CSDE1-217ENST00000534699 CEND1Q8N111 149 aa5.64□□□□□ -1.51
CSDE1-217ENST00000534699 F8W1H4 67 aa5.63□□□□□ -1.51
CSDE1-217ENST00000534699 RAB37Q96AX2 223 aa5.63□□□□□ -1.51
CSDE1-217ENST00000534699 J3QR89 54 aa5.62□□□□□ -1.51
CSDE1-217ENST00000534699 KRTAP9-2Q9BYQ4 174 aa5.62□□□□□ -1.51
CSDE1-217ENST00000534699 FXYD2P54710 66 aa5.61□□□□□ -1.51
CSDE1-217ENST00000534699 KRTAP4-1Q9BYQ7 146 aa5.61□□□□□ -1.51
CSDE1-217ENST00000534699 IGFL1Q6UW32 110 aa5.61□□□□□ -1.51
CSDE1-217ENST00000534699 CFC1P0CG37 223 aa5.6□□□□□ -1.51
CSDE1-217ENST00000534699 PCOTHQ58A44 107 aa5.6□□□□□ -1.51
CSDE1-217ENST00000534699 NAA38Q9BRA0 125 aaKnown RBP5.6□□□□□ -1.51
CSDE1-217ENST00000534699 TEN1Q86WV5 123 aa5.59□□□□□ -1.51
CSDE1-217ENST00000534699 SIGMAR1Q99720 223 aa5.59□□□□□ -1.51
CSDE1-217ENST00000534699 Q75L30 129 aa5.59□□□□□ -1.52
CSDE1-217ENST00000534699 LST1O00453 97 aa5.58□□□□□ -1.52
CSDE1-217ENST00000534699 C9orf92A6NGG3 77 aa5.58□□□□□ -1.52
CSDE1-217ENST00000534699 PRO1854Q9UHT4 67 aa5.57□□□□□ -1.52
CSDE1-217ENST00000534699 K7ERJ3 54 aa5.56□□□□□ -1.52
CSDE1-217ENST00000534699 NDUFV3P56181 108 aaKnown RBP5.56□□□□□ -1.52
CSDE1-217ENST00000534699 LCE2CQ5TA81 110 aa5.55□□□□□ -1.52
CSDE1-217ENST00000534699 PRO0461Q9UI25 63 aa5.55□□□□□ -1.52
CSDE1-217ENST00000534699 KRTAP19-2Q3LHN2 52 aa5.54□□□□□ -1.52
CSDE1-217ENST00000534699 LYRM7Q5U5X0 104 aa5.54□□□□□ -1.52
CSDE1-217ENST00000534699 A0A1B0GV72 72 aa5.54□□□□□ -1.52
CSDE1-217ENST00000534699 H3BMG7 143 aa5.53□□□□□ -1.52
CSDE1-217ENST00000534699 FAT4Q6V0I7 4981 aa5.53□□□□□ -1.52
CSDE1-217ENST00000534699 COX6CP09669 75 aa5.53□□□□□ -1.52
CSDE1-217ENST00000534699 ATP11AUNQ6ZP68 121 aa5.52□□□□□ -1.53
CSDE1-217ENST00000534699 MTURNQ8N3F0 131 aa5.52□□□□□ -1.53
CSDE1-217ENST00000534699 KRTAP3-3Q9BYR6 98 aa5.52□□□□□ -1.53
CSDE1-217ENST00000534699 KRTAP3-2Q9BYR7 98 aa5.52□□□□□ -1.53
CSDE1-217ENST00000534699 ETDBQ3ZM63 59 aa5.51□□□□□ -1.53
CSDE1-217ENST00000534699 C20orf166-AS1Q96NR2 134 aa5.51□□□□□ -1.53
CSDE1-217ENST00000534699 TRBV20-1A0A075B6N2 111 aa5.51□□□□□ -1.53
CSDE1-217ENST00000534699 TRBV7-4A0A0J9YYF1 115 aa5.51□□□□□ -1.53
CSDE1-217ENST00000534699 TMEM256-PLSCR3K7ERE1 68 aa5.51□□□□□ -1.53
CSDE1-217ENST00000534699 A0A0G2JQZ4 141 aa5.5□□□□□ -1.53
CSDE1-217ENST00000534699 MT1HP80294 61 aa5.5□□□□□ -1.53
CSDE1-217ENST00000534699 ORMDL1Q9P0S3 153 aa5.5□□□□□ -1.53
CSDE1-217ENST00000534699 A8MUU9 505 aa5.49□□□□□ -1.53
CSDE1-217ENST00000534699 DNAL4O96015 105 aa5.49□□□□□ -1.53
CSDE1-217ENST00000534699 KRTAP9-6A0A140TA67 174 aa5.48□□□□□ -1.53
CSDE1-217ENST00000534699 FAM218AQ96MZ4 157 aa5.48□□□□□ -1.53
CSDE1-217ENST00000534699 TRACP01848 142 aa5.47□□□□□ -1.53
CSDE1-217ENST00000534699 PSMB2P49721 201 aa5.47□□□□□ -1.53
CSDE1-217ENST00000534699 SMCPP49901 116 aaPredicted RBP5.47□□□□□ -1.53
CSDE1-217ENST00000534699 A0A1B0GW54 56 aa5.46□□□□□ -1.54
CSDE1-217ENST00000534699 TRIAP1O43715 76 aa5.46□□□□□ -1.54
CSDE1-217ENST00000534699 ANKRD29Q8N6D5 301 aa5.46□□□□□ -1.54
CSDE1-217ENST00000534699 OBSCN-AS1Q96MR7 158 aa5.45□□□□□ -1.54
CSDE1-217ENST00000534699 COX6B2Q6YFQ2 88 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms