RNA–Protein interactions for RNA: ENST00000533979.5

ATM-223, Transcript of ATM serine/threonine kinase, humanhuman

TSL 3

Gene ATM, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-223ENST00000533979 LOC101927531A0A1B0GV80 90 aa2.36□□□□□ -2.03
ATM-223ENST00000533979 LINC01549A6NIU2 74 aa2.36□□□□□ -2.03
ATM-223ENST00000533979 M0R135 149 aa2.36□□□□□ -2.03
ATM-223ENST00000533979 ARMS2P0C7Q2 107 aa2.36□□□□□ -2.03
ATM-223ENST00000533979 RPS27P42677 84 aaKnown RBP2.36□□□□□ -2.03
ATM-223ENST00000533979 UBE2D1P51668 147 aa2.36□□□□□ -2.03
ATM-223ENST00000533979 LINC00304Q8N9R0 145 aa2.36□□□□□ -2.03
ATM-223ENST00000533979 DEFB108BQ8NET1 73 aa2.36□□□□□ -2.03
ATM-223ENST00000533979 Q8TAT8 98 aa2.36□□□□□ -2.03
ATM-223ENST00000533979 KAAG1Q9UBP8 84 aa2.36□□□□□ -2.03
ATM-223ENST00000533979 KIAA1109Q2LD37 5005 aa2.35□□□□□ -2.03
ATM-223ENST00000533979 D6R8Y8 96 aa2.35□□□□□ -2.03
ATM-223ENST00000533979 J3QRE1 110 aa2.35□□□□□ -2.03
ATM-223ENST00000533979 SAA2P0DJI9 122 aaPredicted RBP2.35□□□□□ -2.03
ATM-223ENST00000533979 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.35□□□□□ -2.03
ATM-223ENST00000533979 MUSTN1Q8IVN3 82 aa2.35□□□□□ -2.03
ATM-223ENST00000533979 DNAH9Q9NYC9 4486 aa2.35□□□□□ -2.03
ATM-223ENST00000533979 DYNC2H1Q8NCM8 4307 aaKnown RBP2.35□□□□□ -2.03
ATM-223ENST00000533979 TRBV10-1A0A0K0K1A3 114 aa2.34□□□□□ -2.03
ATM-223ENST00000533979 P0C880 135 aa2.34□□□□□ -2.03
ATM-223ENST00000533979 SNRPGP62308 76 aaKnown RBP2.34□□□□□ -2.03
ATM-223ENST00000533979 GDF5OSQ5U4N7 250 aa2.34□□□□□ -2.03
ATM-223ENST00000533979 NDUFA4L2Q9NRX3 87 aa2.34□□□□□ -2.03
ATM-223ENST00000533979 CLPSL1A2RUU4 121 aa2.33□□□□□ -2.04
ATM-223ENST00000533979 PPYP01298 95 aa2.33□□□□□ -2.04
ATM-223ENST00000533979 IGHV3-33P01772 117 aa2.33□□□□□ -2.04
ATM-223ENST00000533979 ELOF1P60002 83 aaKnown RBP2.33□□□□□ -2.04
ATM-223ENST00000533979 R4GMQ9 66 aa2.33□□□□□ -2.04
ATM-223ENST00000533979 HERC1Q15751 4861 aa2.33□□□□□ -2.04
ATM-223ENST00000533979 DNAH1Q9P2D7 4330 aa2.33□□□□□ -2.04
ATM-223ENST00000533979 TRAV12-1A0A0B4J245 112 aa2.32□□□□□ -2.04
ATM-223ENST00000533979 HIGD1CA8MV81 97 aa2.32□□□□□ -2.04
ATM-223ENST00000533979 KRTAP5-8O75690 187 aa2.32□□□□□ -2.04
ATM-223ENST00000533979 CAV3P56539 151 aa2.32□□□□□ -2.04
ATM-223ENST00000533979 HCP5Q6MZN7 132 aa2.32□□□□□ -2.04
ATM-223ENST00000533979 CSAG1Q6PB30 78 aa2.32□□□□□ -2.04
ATM-223ENST00000533979 ZNF833PQ6ZTB9 187 aa2.32□□□□□ -2.04
ATM-223ENST00000533979 LYPD1Q8N2G4 141 aa2.32□□□□□ -2.04
ATM-223ENST00000533979 SPACA4Q8TDM5 124 aa2.32□□□□□ -2.04
ATM-223ENST00000533979 GAFA1Q96PS6 74 aa2.32□□□□□ -2.04
ATM-223ENST00000533979 TXNDC17Q9BRA2 123 aa2.32□□□□□ -2.04
ATM-223ENST00000533979 ORMDL1Q9P0S3 153 aa2.32□□□□□ -2.04
ATM-223ENST00000533979 LENEPQ9Y5L5 61 aa2.32□□□□□ -2.04
ATM-223ENST00000533979 SNURFQ9Y675 71 aa2.32□□□□□ -2.04
ATM-223ENST00000533979 SACSQ9NZJ4 4579 aa2.31□□□□□ -2.04
ATM-223ENST00000533979 TRBV30A0A0K0K1B3 111 aa2.31□□□□□ -2.04
ATM-223ENST00000533979 M0R1W7 72 aa2.31□□□□□ -2.04
ATM-223ENST00000533979 FCER1GP30273 86 aa2.31□□□□□ -2.04
ATM-223ENST00000533979 KRTAP26-1Q6PEX3 210 aa2.31□□□□□ -2.04
ATM-223ENST00000533979 PRR15LQ9BU68 103 aa2.31□□□□□ -2.04
ATM-223ENST00000533979 DMBT1Q9UGM3 2413 aaPredicted RBP2.3□□□□□ -2.04
ATM-223ENST00000533979 TRBV7-4A0A0J9YYF1 115 aa2.3□□□□□ -2.04
ATM-223ENST00000533979 SPAG11BQ08648 103 aa2.3□□□□□ -2.04
ATM-223ENST00000533979 PDE6HQ13956 83 aa2.3□□□□□ -2.04
ATM-223ENST00000533979 DEFB112Q30KQ8 113 aa2.3□□□□□ -2.04
ATM-223ENST00000533979 C1orf137Q5JT78 98 aa2.3□□□□□ -2.04
ATM-223ENST00000533979 FAM74A4Q5TZK3 123 aa2.3□□□□□ -2.04
ATM-223ENST00000533979 SPAG11AQ6PDA7 123 aa2.3□□□□□ -2.04
ATM-223ENST00000533979 BRD3OSQ6XYD6 125 aa2.3□□□□□ -2.04
ATM-223ENST00000533979 DMAC1Q96GE9 116 aa2.3□□□□□ -2.04
ATM-223ENST00000533979 TTTY10Q9BZA0 68 aa2.3□□□□□ -2.04
ATM-223ENST00000533979 MRPL36Q9P0J6 103 aaKnown RBP2.3□□□□□ -2.04
ATM-223ENST00000533979 HUWE1Q7Z6Z7 4374 aaKnown RBP2.29□□□□□ -2.04
ATM-223ENST00000533979 A0A087WVE0 104 aa2.29□□□□□ -2.04
ATM-223ENST00000533979 TRAV1-2A0A0B4J238 106 aa2.29□□□□□ -2.04
ATM-223ENST00000533979 TRGV4A0A0C4DH28 118 aa2.29□□□□□ -2.04
ATM-223ENST00000533979 IGKV3D-7A0A0C4DH55 119 aa2.29□□□□□ -2.04
ATM-223ENST00000533979 A0A0J9YY99 117 aa2.29□□□□□ -2.04
ATM-223ENST00000533979 H3BRN7 92 aa2.29□□□□□ -2.04
ATM-223ENST00000533979 PPP1R17O96001 155 aa2.29□□□□□ -2.04
ATM-223ENST00000533979 IGHV3-30P01768 117 aa2.29□□□□□ -2.04
ATM-223ENST00000533979 IGHV3-30-5P0DP03 117 aa2.29□□□□□ -2.04
ATM-223ENST00000533979 KRTAP5-7Q6L8G8 165 aa2.29□□□□□ -2.04
ATM-223ENST00000533979 Q86TA4 180 aa2.29□□□□□ -2.04
ATM-223ENST00000533979 AMELXQ99217 191 aa2.29□□□□□ -2.04
ATM-223ENST00000533979 DNAH7Q8WXX0 4024 aa2.28□□□□□ -2.04
ATM-223ENST00000533979 HECTD4Q9Y4D8 3996 aa2.28□□□□□ -2.04
ATM-223ENST00000533979 ABCA13Q86UQ4 5058 aa2.28□□□□□ -2.04
ATM-223ENST00000533979 TRBV6-5A0A0K0K1A5 114 aa2.28□□□□□ -2.04
ATM-223ENST00000533979 NUPR2A6NF83 97 aa2.28□□□□□ -2.04
ATM-223ENST00000533979 DNAL4O96015 105 aa2.28□□□□□ -2.04
ATM-223ENST00000533979 SRRM2Q9UQ35 2752 aaKnown RBP2.28□□□□□ -2.04
ATM-223ENST00000533979 LYSTQ99698 3801 aa2.28□□□□□ -2.04
ATM-223ENST00000533979 A0A1B0GUT8 65 aa2.27□□□□□ -2.05
ATM-223ENST00000533979 H3BSH0 61 aa2.27□□□□□ -2.05
ATM-223ENST00000533979 IGKV1-17P01599 117 aa2.27□□□□□ -2.05
ATM-223ENST00000533979 CCL3L1P16619 93 aa2.27□□□□□ -2.05
ATM-223ENST00000533979 SERF2P84101 59 aa2.27□□□□□ -2.05
ATM-223ENST00000533979 PRB3Q04118 309 aaPredicted RBP2.27□□□□□ -2.05
ATM-223ENST00000533979 MINOS1Q5TGZ0 78 aa2.27□□□□□ -2.05
ATM-223ENST00000533979 TNCP24821 2201 aa2.27□□□□□ -2.05
ATM-223ENST00000533979 SMIM27A0A1W2PRY6 76 aa2.26□□□□□ -2.05
ATM-223ENST00000533979 ZNF137PP52743 207 aa2.26□□□□□ -2.05
ATM-223ENST00000533979 PLECQ15149 4684 aaKnown RBP2.26□□□□□ -2.05
ATM-223ENST00000533979 CSMD3Q7Z407 3707 aa2.26□□□□□ -2.05
ATM-223ENST00000533979 IGKV3-7A0A075B6H7 116 aa2.25□□□□□ -2.05
ATM-223ENST00000533979 F8VRH5 84 aa2.25□□□□□ -2.05
ATM-223ENST00000533979 H3BUX3 64 aa2.25□□□□□ -2.05
ATM-223ENST00000533979 M0R3E3 92 aa2.25□□□□□ -2.05
ATM-223ENST00000533979 NDUFB1O75438 58 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms