RNA–Protein interactions for RNA: ENST00000533834.1

RNPC3-209, Transcript of RNA binding region (RNP1, RRM) containing 3, humanhuman

TSL 1 (best)

Gene RNPC3, Length 3,658 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNPC3-209ENST00000533834 F8P00451 2351 aa4.45□□□□□ -1.7
RNPC3-209ENST00000533834 A0A096LNI7 61 aa4.44□□□□□ -1.7
RNPC3-209ENST00000533834 PANO1I0J062 215 aa4.44□□□□□ -1.7
RNPC3-209ENST00000533834 DPH3Q96FX2 82 aa4.44□□□□□ -1.7
RNPC3-209ENST00000533834 DSCR10P59022 87 aa4.44□□□□□ -1.7
RNPC3-209ENST00000533834 MRPL55Q7Z7F7 128 aaKnown RBP4.44□□□□□ -1.7
RNPC3-209ENST00000533834 LOC107984640A0A0U1RRK4 108 aa4.43□□□□□ -1.7
RNPC3-209ENST00000533834 C16orf90A8MZG2 172 aa4.43□□□□□ -1.7
RNPC3-209ENST00000533834 CHTF8P0CG12 524 aa4.43□□□□□ -1.7
RNPC3-209ENST00000533834 KRTAP4-11Q9BYQ6 195 aa4.43□□□□□ -1.7
RNPC3-209ENST00000533834 H0Y9J4 135 aa4.43□□□□□ -1.7
RNPC3-209ENST00000533834 C9orf153Q5TBE3 101 aa4.43□□□□□ -1.7
RNPC3-209ENST00000533834 Q5XG85 94 aa4.43□□□□□ -1.7
RNPC3-209ENST00000533834 TRAV7A0A075B6U4 112 aa4.43□□□□□ -1.7
RNPC3-209ENST00000533834 KRTAP5-3Q6L8H2 238 aa4.43□□□□□ -1.7
RNPC3-209ENST00000533834 DSCR8Q96T75 97 aa4.43□□□□□ -1.7
RNPC3-209ENST00000533834 UBL5Q9BZL1 73 aa4.43□□□□□ -1.7
RNPC3-209ENST00000533834 DHRS4-AS1Q9P1J3 65 aa4.43□□□□□ -1.7
RNPC3-209ENST00000533834 NOTCH1P46531 2555 aa4.42□□□□□ -1.7
RNPC3-209ENST00000533834 ZCCHC13Q8WW36 166 aaKnown RBP4.42□□□□□ -1.7
RNPC3-209ENST00000533834 GHRHP01286 108 aa4.42□□□□□ -1.7
RNPC3-209ENST00000533834 RPL37AP8A6NKH3 93 aa4.42□□□□□ -1.7
RNPC3-209ENST00000533834 TMEM258P61165 79 aa4.42□□□□□ -1.7
RNPC3-209ENST00000533834 FAM19A5Q7Z5A7 132 aaPredicted RBP4.42□□□□□ -1.7
RNPC3-209ENST00000533834 STAB2Q8WWQ8 2551 aa4.41□□□□□ -1.7
RNPC3-209ENST00000533834 Q8NBF4 154 aa4.41□□□□□ -1.7
RNPC3-209ENST00000533834 LAMTOR3Q9UHA4 124 aa4.41□□□□□ -1.7
RNPC3-209ENST00000533834 APOBP04114 4563 aaKnown RBP4.41□□□□□ -1.7
RNPC3-209ENST00000533834 MDFIQ99750 246 aa4.41□□□□□ -1.7
RNPC3-209ENST00000533834 A0A0U1RQV1 116 aa4.4□□□□□ -1.7
RNPC3-209ENST00000533834 KRTAP4-5Q9BYR2 181 aa4.4□□□□□ -1.7
RNPC3-209ENST00000533834 ASB16-AS1Q495Z4 193 aa4.4□□□□□ -1.71
RNPC3-209ENST00000533834 C4orf48Q5BLP8 95 aa4.4□□□□□ -1.71
RNPC3-209ENST00000533834 BPY2O14599 106 aa4.39□□□□□ -1.71
RNPC3-209ENST00000533834 SMIM20Q8N5G0 67 aa4.39□□□□□ -1.71
RNPC3-209ENST00000533834 KRTAP29-1A8MX34 341 aaPredicted RBP4.39□□□□□ -1.71
RNPC3-209ENST00000533834 REG3GQ6UW15 175 aa4.39□□□□□ -1.71
RNPC3-209ENST00000533834 IGFL1Q6UW32 110 aa4.39□□□□□ -1.71
RNPC3-209ENST00000533834 Q8N9L7 120 aa4.39□□□□□ -1.71
RNPC3-209ENST00000533834 B9D2Q9BPU9 175 aa4.39□□□□□ -1.71
RNPC3-209ENST00000533834 LCE4AQ5TA78 99 aa4.39□□□□□ -1.71
RNPC3-209ENST00000533834 Q96NJ1 140 aa4.39□□□□□ -1.71
RNPC3-209ENST00000533834 C9orf163Q8N9P6 203 aa4.38□□□□□ -1.71
RNPC3-209ENST00000533834 LINC00476Q8WZB0 136 aa4.37□□□□□ -1.71
RNPC3-209ENST00000533834 COL6A5A8TX70 2615 aa4.37□□□□□ -1.71
RNPC3-209ENST00000533834 LINC00483Q53H64 154 aa4.37□□□□□ -1.71
RNPC3-209ENST00000533834 SCXQ7RTU7 201 aa4.37□□□□□ -1.71
RNPC3-209ENST00000533834 SPACA4Q8TDM5 124 aa4.37□□□□□ -1.71
RNPC3-209ENST00000533834 A0A0G2JQZ4 141 aa4.36□□□□□ -1.71
RNPC3-209ENST00000533834 Q6ZR54 194 aa4.36□□□□□ -1.71
RNPC3-209ENST00000533834 NKAPP1Q8N9T2 125 aa4.36□□□□□ -1.71
RNPC3-209ENST00000533834 C1orf137Q5JT78 98 aa4.36□□□□□ -1.71
RNPC3-209ENST00000533834 LINC00472Q9H8W2 130 aa4.35□□□□□ -1.71
RNPC3-209ENST00000533834 RMI2Q96E14 147 aa4.35□□□□□ -1.71
RNPC3-209ENST00000533834 K7EQZ3 153 aa4.34□□□□□ -1.71
RNPC3-209ENST00000533834 C3orf84H3BNL1 204 aa4.34□□□□□ -1.72
RNPC3-209ENST00000533834 NREPQ16612 68 aa4.34□□□□□ -1.72
RNPC3-209ENST00000533834 FP248Q71RG6 208 aaPredicted RBP4.34□□□□□ -1.72
RNPC3-209ENST00000533834 PHF5AQ7RTV0 110 aaKnown RBP4.34□□□□□ -1.72
RNPC3-209ENST00000533834 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.34□□□□□ -1.72
RNPC3-209ENST00000533834 HAMPP81172 84 aa4.33□□□□□ -1.72
RNPC3-209ENST00000533834 KRTAP9-8Q9BYQ0 159 aa4.33□□□□□ -1.72
RNPC3-209ENST00000533834 NBDYA0A0U1RRE5 68 aa4.33□□□□□ -1.72
RNPC3-209ENST00000533834 J3KT08 172 aa4.33□□□□□ -1.72
RNPC3-209ENST00000533834 C20orf197Q8N268 126 aa4.33□□□□□ -1.72
RNPC3-209ENST00000533834 PRLHP81277 87 aa4.32□□□□□ -1.72
RNPC3-209ENST00000533834 DEFB105AQ8NG35 78 aa4.31□□□□□ -1.72
RNPC3-209ENST00000533834 ETDCA0A1B0GVM5 59 aa4.31□□□□□ -1.72
RNPC3-209ENST00000533834 TMEM254Q8TBM7 123 aa4.31□□□□□ -1.72
RNPC3-209ENST00000533834 HSPG2P98160 4391 aa4.3□□□□□ -1.72
RNPC3-209ENST00000533834 FAM229BQ4G0N7 80 aa4.3□□□□□ -1.72
RNPC3-209ENST00000533834 RYR2Q92736 4967 aa4.29□□□□□ -1.72
RNPC3-209ENST00000533834 SNURFQ9Y675 71 aa4.29□□□□□ -1.72
RNPC3-209ENST00000533834 TNXBP22105 4242 aa4.29□□□□□ -1.72
RNPC3-209ENST00000533834 PLAC8Q9NZF1 115 aa4.29□□□□□ -1.72
RNPC3-209ENST00000533834 DYNC1H1Q14204 4646 aaKnown RBP4.29□□□□□ -1.72
RNPC3-209ENST00000533834 WWC2-AS2Q96NR7 200 aa4.28□□□□□ -1.72
RNPC3-209ENST00000533834 FAT3Q8TDW7 4589 aa4.28□□□□□ -1.72
RNPC3-209ENST00000533834 FAM236DA0A1B0GTK5 79 aa4.28□□□□□ -1.72
RNPC3-209ENST00000533834 F8WEM9 126 aa4.28□□□□□ -1.72
RNPC3-209ENST00000533834 FAM236CP0DP71 79 aa4.28□□□□□ -1.72
RNPC3-209ENST00000533834 KRTAP13-3Q3SY46 172 aa4.28□□□□□ -1.72
RNPC3-209ENST00000533834 SERP1Q9Y6X1 66 aa4.28□□□□□ -1.72
RNPC3-209ENST00000533834 A0A087WTM6 91 aa4.27□□□□□ -1.73
RNPC3-209ENST00000533834 NDUFC1O43677 76 aa4.27□□□□□ -1.73
RNPC3-209ENST00000533834 PSCAO43653 123 aa4.27□□□□□ -1.73
RNPC3-209ENST00000533834 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.26□□□□□ -1.73
RNPC3-209ENST00000533834 HIGD2AQ9BW72 106 aa4.26□□□□□ -1.73
RNPC3-209ENST00000533834 MMP24-AS1A0A0U1RRL7 71 aa4.26□□□□□ -1.73
RNPC3-209ENST00000533834 NUPR2A6NF83 97 aa4.26□□□□□ -1.73
RNPC3-209ENST00000533834 FUSP35637 526 aaKnown RBP eCLIP4.26□□□□□ -1.73
RNPC3-209ENST00000533834 C14orf177Q52M58 125 aa4.26□□□□□ -1.73
RNPC3-209ENST00000533834 C4orf26Q17RF5 130 aa4.25□□□□□ -1.73
RNPC3-209ENST00000533834 TGP01266 2768 aa4.25□□□□□ -1.73
RNPC3-209ENST00000533834 IGLV5-52A0A0A0MRZ9 124 aa4.25□□□□□ -1.73
RNPC3-209ENST00000533834 IGKV2-24A0A0C4DH68 120 aa4.25□□□□□ -1.73
RNPC3-209ENST00000533834 UBE2BP63146 152 aa4.25□□□□□ -1.73
RNPC3-209ENST00000533834 MOBPQ13875 183 aa4.25□□□□□ -1.73
RNPC3-209ENST00000533834 Q6ZSA8 131 aa4.25□□□□□ -1.73
RNPC3-209ENST00000533834 HCG22E2RYF7 251 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms