RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 KRTAP4-16G5E9R7 235 aaPredicted RBP12.37□□□□□ -0.43
CAPN1-226ENST00000533820 Q5VV11 94 aa12.37□□□□□ -0.43
CAPN1-226ENST00000533820 CSMD3Q7Z407 3707 aa12.36□□□□□ -0.43
CAPN1-226ENST00000533820 PSCAO43653 123 aa12.36□□□□□ -0.43
CAPN1-226ENST00000533820 TLX1NBP0CAT3 122 aa12.33□□□□□ -0.44
CAPN1-226ENST00000533820 Q8NBF4 154 aa12.32□□□□□ -0.44
CAPN1-226ENST00000533820 PRLHP81277 87 aa12.32□□□□□ -0.44
CAPN1-226ENST00000533820 HCG22E2RYF7 251 aa12.31□□□□□ -0.44
CAPN1-226ENST00000533820 K7EQZ3 153 aa12.31□□□□□ -0.44
CAPN1-226ENST00000533820 SPRR1AP35321 89 aa12.3□□□□□ -0.44
CAPN1-226ENST00000533820 TNP2Q05952 138 aa12.3□□□□□ -0.44
CAPN1-226ENST00000533820 UBE2AP49459 152 aa12.28□□□□□ -0.44
CAPN1-226ENST00000533820 REG3GQ6UW15 175 aa12.28□□□□□ -0.44
CAPN1-226ENST00000533820 PRR15LQ9BU68 103 aa12.28□□□□□ -0.44
CAPN1-226ENST00000533820 PLA2G2DQ9UNK4 145 aa12.28□□□□□ -0.44
CAPN1-226ENST00000533820 DSCR10P59022 87 aa12.27□□□□□ -0.44
CAPN1-226ENST00000533820 LINC00476Q8WZB0 136 aa12.27□□□□□ -0.45
CAPN1-226ENST00000533820 H3BS24 57 aa12.26□□□□□ -0.45
CAPN1-226ENST00000533820 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.26□□□□□ -0.45
CAPN1-226ENST00000533820 IGLV5-37A0A075B6J1 123 aa12.24□□□□□ -0.45
CAPN1-226ENST00000533820 LCA10Q71F78 164 aa12.24□□□□□ -0.45
CAPN1-226ENST00000533820 A0A096LNI7 61 aa12.24□□□□□ -0.45
CAPN1-226ENST00000533820 LYSTQ99698 3801 aa12.24□□□□□ -0.45
CAPN1-226ENST00000533820 A6NED7 52 aa12.22□□□□□ -0.45
CAPN1-226ENST00000533820 C8orf87E5RJ46 101 aa12.22□□□□□ -0.45
CAPN1-226ENST00000533820 CMYA5Q8N3K9 4069 aa12.22□□□□□ -0.45
CAPN1-226ENST00000533820 WFDC13Q8IUB5 93 aa12.22□□□□□ -0.45
CAPN1-226ENST00000533820 DNAH10Q8IVF4 4471 aa12.21□□□□□ -0.45
CAPN1-226ENST00000533820 SPRR4Q96PI1 79 aa12.21□□□□□ -0.46
CAPN1-226ENST00000533820 KRTAP1-5Q9BYS1 174 aa12.21□□□□□ -0.46
CAPN1-226ENST00000533820 IGFL1Q6UW32 110 aa12.2□□□□□ -0.46
CAPN1-226ENST00000533820 A0A087WSZ3 146 aa12.2□□□□□ -0.46
CAPN1-226ENST00000533820 NDUFS5O43920 106 aa12.2□□□□□ -0.46
CAPN1-226ENST00000533820 CHTF8P0CG12 524 aa12.19□□□□□ -0.46
CAPN1-226ENST00000533820 COL7A1Q02388 2944 aa12.19□□□□□ -0.46
CAPN1-226ENST00000533820 RPL37AP61513 92 aaKnown RBP12.19□□□□□ -0.46
CAPN1-226ENST00000533820 A6NN06 94 aa12.17□□□□□ -0.46
CAPN1-226ENST00000533820 ZCCHC13Q8WW36 166 aaKnown RBP12.17□□□□□ -0.46
CAPN1-226ENST00000533820 ATP11AUNQ6ZP68 121 aa12.16□□□□□ -0.46
CAPN1-226ENST00000533820 Q8N9P0 234 aaPredicted RBP12.15□□□□□ -0.46
CAPN1-226ENST00000533820 CYP4F30PQ9H0H9 118 aa12.14□□□□□ -0.47
CAPN1-226ENST00000533820 K7EIL1 84 aa12.14□□□□□ -0.47
CAPN1-226ENST00000533820 KRTAP11-1Q8IUC1 163 aa12.13□□□□□ -0.47
CAPN1-226ENST00000533820 PHF5AQ7RTV0 110 aaKnown RBP12.13□□□□□ -0.47
CAPN1-226ENST00000533820 A0A1B0GW54 56 aa12.12□□□□□ -0.47
CAPN1-226ENST00000533820 B9D2Q9BPU9 175 aa12.11□□□□□ -0.47
CAPN1-226ENST00000533820 LCE6AA0A183 80 aa12.1□□□□□ -0.47
CAPN1-226ENST00000533820 C7orf65Q6ZTY9 151 aa12.1□□□□□ -0.47
CAPN1-226ENST00000533820 UBE2DNLQ8IWF7 75 aa12.09□□□□□ -0.47
CAPN1-226ENST00000533820 HUWE1Q7Z6Z7 4374 aaKnown RBP12.09□□□□□ -0.47
CAPN1-226ENST00000533820 LIMD2Q9BT23 127 aa12.07□□□□□ -0.48
CAPN1-226ENST00000533820 DNAH1Q9P2D7 4330 aa12.07□□□□□ -0.48
CAPN1-226ENST00000533820 LINC00208Q96KT6 92 aa12.05□□□□□ -0.48
CAPN1-226ENST00000533820 DNAH3Q8TD57 4116 aa12.03□□□□□ -0.48
CAPN1-226ENST00000533820 PRAC1Q96KF2 57 aa12.03□□□□□ -0.48
CAPN1-226ENST00000533820 MOBPQ13875 183 aa12.01□□□□□ -0.49
CAPN1-226ENST00000533820 DNAH9Q9NYC9 4486 aa12.01□□□□□ -0.49
CAPN1-226ENST00000533820 MDFIQ99750 246 aa12□□□□□ -0.49
CAPN1-226ENST00000533820 NDUFB1O75438 58 aa11.97□□□□□ -0.49
CAPN1-226ENST00000533820 CNBPP62633 177 aaKnown RBP11.97□□□□□ -0.49
CAPN1-226ENST00000533820 Q75L30 129 aa11.97□□□□□ -0.49
CAPN1-226ENST00000533820 PANO1I0J062 215 aa11.95□□□□□ -0.5
CAPN1-226ENST00000533820 CDC42SE1Q9NRR8 79 aa11.95□□□□□ -0.5
CAPN1-226ENST00000533820 MP68P56378 58 aa11.95□□□□□ -0.5
CAPN1-226ENST00000533820 CASC2Q6XLA1 102 aa11.95□□□□□ -0.5
CAPN1-226ENST00000533820 H0Y9J4 135 aa11.94□□□□□ -0.5
CAPN1-226ENST00000533820 IGLV8-61A0A075B6I0 122 aa11.92□□□□□ -0.5
CAPN1-226ENST00000533820 DNAH7Q8WXX0 4024 aa11.91□□□□□ -0.5
CAPN1-226ENST00000533820 IGLV9-49A0A0B4J1Y8 123 aa11.9□□□□□ -0.5
CAPN1-226ENST00000533820 H0Y9P7 68 aa11.9□□□□□ -0.51
CAPN1-226ENST00000533820 LINC00313P59037 77 aa11.89□□□□□ -0.51
CAPN1-226ENST00000533820 ADM2Q7Z4H4 148 aa11.89□□□□□ -0.51
CAPN1-226ENST00000533820 LOC101927531A0A1B0GV80 90 aa11.88□□□□□ -0.51
CAPN1-226ENST00000533820 SPAG11AQ6PDA7 123 aa11.88□□□□□ -0.51
CAPN1-226ENST00000533820 KRTAP29-1A8MX34 341 aaPredicted RBP11.88□□□□□ -0.51
CAPN1-226ENST00000533820 APLNQ9ULZ1 77 aa11.88□□□□□ -0.51
CAPN1-226ENST00000533820 SPINK7P58062 85 aa11.86□□□□□ -0.51
CAPN1-226ENST00000533820 COA5Q86WW8 74 aa11.85□□□□□ -0.51
CAPN1-226ENST00000533820 C9orf163Q8N9P6 203 aa11.85□□□□□ -0.51
CAPN1-226ENST00000533820 LINC00472Q9H8W2 130 aa11.85□□□□□ -0.51
CAPN1-226ENST00000533820 A8MWP4 228 aa11.84□□□□□ -0.51
CAPN1-226ENST00000533820 C14orf177Q52M58 125 aa11.83□□□□□ -0.52
CAPN1-226ENST00000533820 PRR26Q8N8Z3 221 aa11.81□□□□□ -0.52
CAPN1-226ENST00000533820 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.8□□□□□ -0.52
CAPN1-226ENST00000533820 SPRR1BP22528 89 aa11.79□□□□□ -0.52
CAPN1-226ENST00000533820 ANAPC11Q9NYG5 84 aa11.79□□□□□ -0.52
CAPN1-226ENST00000533820 LINC01554Q52M75 96 aa11.78□□□□□ -0.52
CAPN1-226ENST00000533820 NBDYA0A0U1RRE5 68 aa11.76□□□□□ -0.53
CAPN1-226ENST00000533820 PCOTHQ58A44 107 aa11.76□□□□□ -0.53
CAPN1-226ENST00000533820 SPANXA2-OT1Q8N9U9 137 aa11.75□□□□□ -0.53
CAPN1-226ENST00000533820 MMP24-AS1A0A0U1RRL7 71 aa11.74□□□□□ -0.53
CAPN1-226ENST00000533820 TGP01266 2768 aa11.73□□□□□ -0.53
CAPN1-226ENST00000533820 PLECQ15149 4684 aaKnown RBP11.72□□□□□ -0.53
CAPN1-226ENST00000533820 IGHV6-1A0A0B4J1U7 121 aa11.7□□□□□ -0.54
CAPN1-226ENST00000533820 KRTAP13-1Q8IUC0 172 aa11.69□□□□□ -0.54
CAPN1-226ENST00000533820 Q6ZRN7 208 aaPredicted RBP11.67□□□□□ -0.54
CAPN1-226ENST00000533820 Q96NJ1 140 aa11.65□□□□□ -0.54
CAPN1-226ENST00000533820 LINC01558Q9Y6Z2 57 aa11.65□□□□□ -0.54
CAPN1-226ENST00000533820 SPACA4Q8TDM5 124 aa11.63□□□□□ -0.55
CAPN1-226ENST00000533820 PSORS1C2Q9UIG4 136 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 522.7 ms