RNA–Protein interactions for RNA: ENST00000533683.6

SAMD1-202, Transcript of sterile alpha motif domain containing 1, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene SAMD1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD1-202ENST00000533683 UBE2AP49459 152 aa17.63■□□□□ 0.41
SAMD1-202ENST00000533683 SCXQ7RTU7 201 aa17.63■□□□□ 0.41
SAMD1-202ENST00000533683 WWC2-AS2Q96NR7 200 aa17.63■□□□□ 0.41
SAMD1-202ENST00000533683 NREPQ16612 68 aa17.62■□□□□ 0.41
SAMD1-202ENST00000533683 Q8NBF4 154 aa17.62■□□□□ 0.41
SAMD1-202ENST00000533683 F8WEM9 126 aa17.62■□□□□ 0.41
SAMD1-202ENST00000533683 BCE1O60756 84 aa17.62■□□□□ 0.41
SAMD1-202ENST00000533683 LINC00476Q8WZB0 136 aa17.62■□□□□ 0.41
SAMD1-202ENST00000533683 A0A1B0GW54 56 aa17.6■□□□□ 0.41
SAMD1-202ENST00000533683 J3KT08 172 aa17.6■□□□□ 0.41
SAMD1-202ENST00000533683 DNAH6Q9C0G6 4158 aa17.58■□□□□ 0.4
SAMD1-202ENST00000533683 RPS28P62857 69 aaKnown RBP17.57■□□□□ 0.4
SAMD1-202ENST00000533683 KRTAP13-1Q8IUC0 172 aa17.57■□□□□ 0.4
SAMD1-202ENST00000533683 SPRR4Q96PI1 79 aa17.57■□□□□ 0.4
SAMD1-202ENST00000533683 IGLV5-52A0A0A0MRZ9 124 aa17.57■□□□□ 0.4
SAMD1-202ENST00000533683 IGLV8-61A0A075B6I0 122 aa17.53■□□□□ 0.4
SAMD1-202ENST00000533683 A0A0G2JQZ4 141 aa17.53■□□□□ 0.4
SAMD1-202ENST00000533683 SPRR1BP22528 89 aa17.53■□□□□ 0.4
SAMD1-202ENST00000533683 IGFL1Q6UW32 110 aa17.53■□□□□ 0.4
SAMD1-202ENST00000533683 SERP2Q8N6R1 65 aa17.52■□□□□ 0.4
SAMD1-202ENST00000533683 CRYGAP11844 174 aa17.51■□□□□ 0.39
SAMD1-202ENST00000533683 PLAC8Q9NZF1 115 aa17.5■□□□□ 0.39
SAMD1-202ENST00000533683 BPY2O14599 106 aa17.47■□□□□ 0.39
SAMD1-202ENST00000533683 Q8N9L7 120 aa17.45■□□□□ 0.38
SAMD1-202ENST00000533683 CYSTM1Q9H1C7 97 aa17.45■□□□□ 0.38
SAMD1-202ENST00000533683 ALMS1Q8TCU4 4167 aa17.45■□□□□ 0.38
SAMD1-202ENST00000533683 PSORS1C2Q9UIG4 136 aa17.42■□□□□ 0.38
SAMD1-202ENST00000533683 FRAS1Q86XX4 4008 aa17.42■□□□□ 0.38
SAMD1-202ENST00000533683 DNAH8Q96JB1 4490 aa17.41■□□□□ 0.38
SAMD1-202ENST00000533683 IGKV4-1P06312 121 aa17.41■□□□□ 0.38
SAMD1-202ENST00000533683 KRTAP10-2P60368 255 aa17.36■□□□□ 0.37
SAMD1-202ENST00000533683 DNAH11Q96DT5 4516 aa17.34■□□□□ 0.37
SAMD1-202ENST00000533683 HYDINQ4G0P3 5121 aa17.33■□□□□ 0.36
SAMD1-202ENST00000533683 A0A087WSZ3 146 aa17.31■□□□□ 0.36
SAMD1-202ENST00000533683 DNAH5Q8TE73 4624 aa17.3■□□□□ 0.36
SAMD1-202ENST00000533683 DSCR10P59022 87 aa17.27■□□□□ 0.36
SAMD1-202ENST00000533683 ZNF861PO60384 105 aa17.26■□□□□ 0.35
SAMD1-202ENST00000533683 LINC00483Q53H64 154 aa17.26■□□□□ 0.35
SAMD1-202ENST00000533683 FAM30AQ9NZY2 134 aa17.26■□□□□ 0.35
SAMD1-202ENST00000533683 TRAV7A0A075B6U4 112 aa17.26■□□□□ 0.35
SAMD1-202ENST00000533683 TMEM258P61165 79 aa17.25■□□□□ 0.35
SAMD1-202ENST00000533683 ZNF706Q9Y5V0 76 aaPredicted RBP17.22■□□□□ 0.35
SAMD1-202ENST00000533683 PKD1P98161 4303 aa17.21■□□□□ 0.35
SAMD1-202ENST00000533683 FAT2Q9NYQ8 4349 aa17.21■□□□□ 0.35
SAMD1-202ENST00000533683 IGLV9-49A0A0B4J1Y8 123 aa17.21■□□□□ 0.34
SAMD1-202ENST00000533683 CIRBP-AS1Q8TBR5 109 aa17.21■□□□□ 0.34
SAMD1-202ENST00000533683 K7EQZ3 153 aa17.19■□□□□ 0.34
SAMD1-202ENST00000533683 DEFB116Q30KQ4 102 aa17.19■□□□□ 0.34
SAMD1-202ENST00000533683 IGLV7-43P04211 117 aa17.15■□□□□ 0.34
SAMD1-202ENST00000533683 C20orf197Q8N268 126 aa17.15■□□□□ 0.34
SAMD1-202ENST00000533683 KRTAP10-1P60331 282 aa17.13■□□□□ 0.33
SAMD1-202ENST00000533683 ANAPC11Q9NYG5 84 aa17.13■□□□□ 0.33
SAMD1-202ENST00000533683 Q6ZSA8 131 aa17.12■□□□□ 0.33
SAMD1-202ENST00000533683 RPL37AP61513 92 aaKnown RBP17.08■□□□□ 0.33
SAMD1-202ENST00000533683 OCR1Q9BZK8 76 aa17.07■□□□□ 0.32
SAMD1-202ENST00000533683 LINC00472Q9H8W2 130 aa17.07■□□□□ 0.32
SAMD1-202ENST00000533683 MOBPQ13875 183 aa17.05■□□□□ 0.32
SAMD1-202ENST00000533683 Q5XG85 94 aa17.01■□□□□ 0.31
SAMD1-202ENST00000533683 HCG22E2RYF7 251 aa16.99■□□□□ 0.31
SAMD1-202ENST00000533683 SACSQ9NZJ4 4579 aa16.99■□□□□ 0.31
SAMD1-202ENST00000533683 HRCT1Q6UXD1 115 aa16.99■□□□□ 0.31
SAMD1-202ENST00000533683 KLKP1Q107X0 134 aa16.98■□□□□ 0.31
SAMD1-202ENST00000533683 SNURFQ9Y675 71 aa16.97■□□□□ 0.31
SAMD1-202ENST00000533683 H7BZZ5 65 aa16.96■□□□□ 0.31
SAMD1-202ENST00000533683 LRP1BQ9NZR2 4599 aa16.96■□□□□ 0.31
SAMD1-202ENST00000533683 A8MWP4 228 aa16.93■□□□□ 0.3
SAMD1-202ENST00000533683 C4orf26Q17RF5 130 aa16.93■□□□□ 0.3
SAMD1-202ENST00000533683 PRR15Q8IV56 129 aa16.92■□□□□ 0.3
SAMD1-202ENST00000533683 OXTP01178 125 aa16.92■□□□□ 0.3
SAMD1-202ENST00000533683 PRO0628Q9UI54 55 aa16.92■□□□□ 0.3
SAMD1-202ENST00000533683 Q96NJ1 140 aa16.91■□□□□ 0.3
SAMD1-202ENST00000533683 TMEM254Q8TBM7 123 aa16.9■□□□□ 0.3
SAMD1-202ENST00000533683 WFDC13Q8IUB5 93 aa16.88■□□□□ 0.29
SAMD1-202ENST00000533683 FAM236DA0A1B0GTK5 79 aa16.85■□□□□ 0.29
SAMD1-202ENST00000533683 FAM236CP0DP71 79 aa16.85■□□□□ 0.29
SAMD1-202ENST00000533683 LCE6AA0A183 80 aa16.84■□□□□ 0.29
SAMD1-202ENST00000533683 KRTAP29-1A8MX34 341 aaPredicted RBP16.84■□□□□ 0.29
SAMD1-202ENST00000533683 PKHD1P08F94 4074 aa16.81■□□□□ 0.28
SAMD1-202ENST00000533683 A0A0U1RQV1 116 aa16.79■□□□□ 0.28
SAMD1-202ENST00000533683 CASC2Q6XLA1 102 aa16.78■□□□□ 0.28
SAMD1-202ENST00000533683 NDUFB1O75438 58 aa16.77■□□□□ 0.27
SAMD1-202ENST00000533683 VPS13BQ7Z7G8 4022 aa16.76■□□□□ 0.27
SAMD1-202ENST00000533683 SSBP3-AS1Q7Z2R9 100 aa16.75■□□□□ 0.27
SAMD1-202ENST00000533683 LINC00336Q6ZUF6 198 aa16.75■□□□□ 0.27
SAMD1-202ENST00000533683 NDUFC1O43677 76 aa16.74■□□□□ 0.27
SAMD1-202ENST00000533683 A0A087X002 238 aa16.72■□□□□ 0.27
SAMD1-202ENST00000533683 MMP24-AS1A0A0U1RRL7 71 aa16.72■□□□□ 0.27
SAMD1-202ENST00000533683 SERP1Q9Y6X1 66 aa16.71■□□□□ 0.27
SAMD1-202ENST00000533683 CD164Q04900 197 aa16.7■□□□□ 0.26
SAMD1-202ENST00000533683 KRTAP13-2Q52LG2 175 aa16.68■□□□□ 0.26
SAMD1-202ENST00000533683 FAM229BQ4G0N7 80 aa16.65■□□□□ 0.26
SAMD1-202ENST00000533683 KRTAP1-4P0C5Y4 121 aa16.64■□□□□ 0.25
SAMD1-202ENST00000533683 A0A1B0GVX0 72 aa16.62■□□□□ 0.25
SAMD1-202ENST00000533683 A0A1B0GVY2 172 aa16.62■□□□□ 0.25
SAMD1-202ENST00000533683 hDV103S1A0JD37 113 aa16.62■□□□□ 0.25
SAMD1-202ENST00000533683 IGHV6-1A0A0B4J1U7 121 aa16.6■□□□□ 0.25
SAMD1-202ENST00000533683 CDK2AP2O75956 126 aa16.6■□□□□ 0.25
SAMD1-202ENST00000533683 C8orf17Q9NRJ1 99 aa16.6■□□□□ 0.25
SAMD1-202ENST00000533683 DYNC1H1Q14204 4646 aaKnown RBP16.59■□□□□ 0.25
SAMD1-202ENST00000533683 ASB16-AS1Q495Z4 193 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms