RNA–Protein interactions for RNA: ENST00000533526.1

ATM-220, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 234 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-220ENST00000533526 C12orf57Q99622 126 aa-0.63□□□□□ -2.51
ATM-220ENST00000533526 PMCHL2Q9BQD1 86 aa-0.63□□□□□ -2.51
ATM-220ENST00000533526 CHD7Q9P2D1 2997 aa-0.63□□□□□ -2.51
ATM-220ENST00000533526 PAIP2BQ9ULR5 123 aaKnown RBP-0.63□□□□□ -2.51
ATM-220ENST00000533526 ATP7BP35670 1465 aa-0.63□□□□□ -2.51
ATM-220ENST00000533526 ADGRG4Q8IZF6 3080 aa-0.63□□□□□ -2.51
ATM-220ENST00000533526 CNTLNQ9NXG0 1405 aa-0.64□□□□□ -2.51
ATM-220ENST00000533526 EPRSP07814 1512 aaKnown RBP-0.64□□□□□ -2.51
ATM-220ENST00000533526 FANCAO15360 1455 aa-0.64□□□□□ -2.51
ATM-220ENST00000533526 H3BQF6 201 aa-0.64□□□□□ -2.51
ATM-220ENST00000533526 COX7BP24311 80 aa-0.64□□□□□ -2.51
ATM-220ENST00000533526 DEFA5Q01523 94 aa-0.64□□□□□ -2.51
ATM-220ENST00000533526 SVBPQ8N300 66 aa-0.64□□□□□ -2.51
ATM-220ENST00000533526 SERP2Q8N6R1 65 aa-0.64□□□□□ -2.51
ATM-220ENST00000533526 CGREF1Q99674 301 aa-0.64□□□□□ -2.51
ATM-220ENST00000533526 SNHG12Q9BXW3 62 aa-0.64□□□□□ -2.51
ATM-220ENST00000533526 GNG8Q9UK08 70 aa-0.64□□□□□ -2.51
ATM-220ENST00000533526 S4R3F8 94 aa-0.64□□□□□ -2.51
ATM-220ENST00000533526 LY75O60449 1722 aa-0.64□□□□□ -2.51
ATM-220ENST00000533526 TOGARAM1Q9Y4F4 1720 aa-0.64□□□□□ -2.51
ATM-220ENST00000533526 KIF14Q15058 1648 aa-0.64□□□□□ -2.51
ATM-220ENST00000533526 NAIPQ13075 1403 aa-0.64□□□□□ -2.51
ATM-220ENST00000533526 CEP162Q5TB80 1403 aa-0.64□□□□□ -2.51
ATM-220ENST00000533526 NCOA2Q15596 1464 aa-0.65□□□□□ -2.51
ATM-220ENST00000533526 LRRC9Q6ZRR7 1453 aa-0.65□□□□□ -2.51
ATM-220ENST00000533526 FYCO1Q9BQS8 1478 aa-0.65□□□□□ -2.51
ATM-220ENST00000533526 RIF1Q5UIP0 2472 aaKnown RBP-0.65□□□□□ -2.51
ATM-220ENST00000533526 ZFHX4Q86UP3 3567 aa-0.65□□□□□ -2.51
ATM-220ENST00000533526 H3BQ15 152 aa-0.65□□□□□ -2.51
ATM-220ENST00000533526 DEFB130BP0DP73 79 aa-0.65□□□□□ -2.51
ATM-220ENST00000533526 DEFB130AP0DP74 79 aa-0.65□□□□□ -2.51
ATM-220ENST00000533526 GNGT1P63211 74 aa-0.65□□□□□ -2.51
ATM-220ENST00000533526 WHAMMP3Q1A5X7 153 aa-0.65□□□□□ -2.51
ATM-220ENST00000533526 PRO3102Q9H379 93 aa-0.65□□□□□ -2.51
ATM-220ENST00000533526 CDKN2A-AS1Q9UH64 79 aa-0.65□□□□□ -2.51
ATM-220ENST00000533526 DEPDC5O75140 1603 aa-0.65□□□□□ -2.51
ATM-220ENST00000533526 MAGI3Q5TCQ9 1506 aa-0.65□□□□□ -2.51
ATM-220ENST00000533526 ASXL1Q8IXJ9 1541 aa-0.65□□□□□ -2.51
ATM-220ENST00000533526 KIF1AQ12756 1690 aa-0.65□□□□□ -2.51
ATM-220ENST00000533526 NHSQ6T4R5 1651 aa-0.65□□□□□ -2.51
ATM-220ENST00000533526 TEX14Q8IWB6 1497 aa-0.66□□□□□ -2.51
ATM-220ENST00000533526 VPS13CQ709C8 3753 aa-0.66□□□□□ -2.51
ATM-220ENST00000533526 EIF2AK4Q9P2K8 1649 aaKnown RBP-0.66□□□□□ -2.51
ATM-220ENST00000533526 TRAV30A0A087WSZ9 112 aa-0.66□□□□□ -2.52
ATM-220ENST00000533526 TRAV21A0A0B4J279 112 aa-0.66□□□□□ -2.52
ATM-220ENST00000533526 SPTY2D1-AS1A0A0U1RR47 76 aa-0.66□□□□□ -2.52
ATM-220ENST00000533526 PMCHL1Q16048 86 aa-0.66□□□□□ -2.52
ATM-220ENST00000533526 ETDBQ3ZM63 59 aa-0.66□□□□□ -2.52
ATM-220ENST00000533526 CLIP1P30622 1438 aa-0.66□□□□□ -2.52
ATM-220ENST00000533526 CDC42BPAQ5VT25 1732 aa-0.67□□□□□ -2.52
ATM-220ENST00000533526 LRRIQ1Q96JM4 1722 aa-0.67□□□□□ -2.52
ATM-220ENST00000533526 ATP10BO94823 1461 aa-0.67□□□□□ -2.52
ATM-220ENST00000533526 ABCC2Q92887 1545 aa-0.67□□□□□ -2.52
ATM-220ENST00000533526 EFCAB10A6NFE3 127 aa-0.67□□□□□ -2.52
ATM-220ENST00000533526 IQCF6A8MYZ5 107 aa-0.67□□□□□ -2.52
ATM-220ENST00000533526 LEPROTL1O95214 131 aa-0.67□□□□□ -2.52
ATM-220ENST00000533526 UQCRHP07919 91 aa-0.67□□□□□ -2.52
ATM-220ENST00000533526 FAUP35544 74 aaKnown RBP-0.67□□□□□ -2.52
ATM-220ENST00000533526 MAP3K4Q9Y6R4 1608 aa-0.67□□□□□ -2.52
ATM-220ENST00000533526 PIGBOS1A0A0B4J2F0 54 aa-0.68□□□□□ -2.52
ATM-220ENST00000533526 LCE6AA0A183 80 aa-0.68□□□□□ -2.52
ATM-220ENST00000533526 C20orf202A1L168 122 aa-0.68□□□□□ -2.52
ATM-220ENST00000533526 D6R8Y8 96 aa-0.68□□□□□ -2.52
ATM-220ENST00000533526 ATOX1O00244 68 aa-0.68□□□□□ -2.52
ATM-220ENST00000533526 CCL22O00626 93 aa-0.68□□□□□ -2.52
ATM-220ENST00000533526 LINC00158P58513 81 aa-0.68□□□□□ -2.52
ATM-220ENST00000533526 MT1XP80297 61 aa-0.68□□□□□ -2.52
ATM-220ENST00000533526 MRPS10P82664 201 aaKnown RBP-0.68□□□□□ -2.52
ATM-220ENST00000533526 TDRG1Q3Y452 100 aa-0.68□□□□□ -2.52
ATM-220ENST00000533526 NMSQ5H8A3 153 aa-0.68□□□□□ -2.52
ATM-220ENST00000533526 NCBP2-AS2Q69YL0 99 aa-0.68□□□□□ -2.52
ATM-220ENST00000533526 MUSTN1Q8IVN3 82 aa-0.68□□□□□ -2.52
ATM-220ENST00000533526 ANKRD50Q9ULJ7 1429 aa-0.68□□□□□ -2.52
ATM-220ENST00000533526 CCDC141Q6ZP82 1450 aa-0.68□□□□□ -2.52
ATM-220ENST00000533526 MYO15AQ9UKN7 3530 aa-0.69□□□□□ -2.52
ATM-220ENST00000533526 TMEM218A2RU14 115 aa-0.69□□□□□ -2.52
ATM-220ENST00000533526 C9orf92A6NGG3 77 aa-0.69□□□□□ -2.52
ATM-220ENST00000533526 H0YGG7 62 aa-0.69□□□□□ -2.52
ATM-220ENST00000533526 HMGN2P05204 90 aaKnown RBP-0.69□□□□□ -2.52
ATM-220ENST00000533526 IFI6P09912 130 aa-0.69□□□□□ -2.52
ATM-220ENST00000533526 RBP2P50120 134 aa-0.69□□□□□ -2.52
ATM-220ENST00000533526 PRLHP81277 87 aa-0.69□□□□□ -2.52
ATM-220ENST00000533526 DEFB110Q30KQ9 67 aa-0.69□□□□□ -2.52
ATM-220ENST00000533526 GTF2H5Q6ZYL4 71 aa-0.69□□□□□ -2.52
ATM-220ENST00000533526 GAFA1Q96PS6 74 aa-0.69□□□□□ -2.52
ATM-220ENST00000533526 CSMD2Q7Z408 3487 aa-0.69□□□□□ -2.52
ATM-220ENST00000533526 MYO5CQ9NQX4 1742 aa-0.69□□□□□ -2.52
ATM-220ENST00000533526 ITPR1Q14643 2758 aa-0.7□□□□□ -2.52
ATM-220ENST00000533526 LYNX1G3V0Z9 82 aa-0.7□□□□□ -2.52
ATM-220ENST00000533526 MT1GP13640 62 aa-0.7□□□□□ -2.52
ATM-220ENST00000533526 HMGA1P17096 107 aaKnown RBP-0.7□□□□□ -2.52
ATM-220ENST00000533526 KRTDAPP60985 99 aa-0.7□□□□□ -2.52
ATM-220ENST00000533526 COL5A1-AS1Q5SY13 56 aa-0.7□□□□□ -2.52
ATM-220ENST00000533526 DEFB106AQ8N104 65 aa-0.7□□□□□ -2.52
ATM-220ENST00000533526 CD163L1Q9NR16 1453 aa-0.7□□□□□ -2.52
ATM-220ENST00000533526 SPTAN1Q13813 2472 aaKnown RBP-0.7□□□□□ -2.52
ATM-220ENST00000533526 LRBAP50851 2863 aa-0.7□□□□□ -2.52
ATM-220ENST00000533526 A0A1B0GUL6 1792 aa-0.7□□□□□ -2.52
ATM-220ENST00000533526 TTC37Q6PGP7 1564 aa-0.7□□□□□ -2.52
ATM-220ENST00000533526 IQGAP3Q86VI3 1631 aa-0.71□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms