RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 FAM236CP0DP71 79 aa6.6□□□□□ -1.35
COPB1-209ENST00000533096 KRTAP10-10P60014 251 aa6.6□□□□□ -1.35
COPB1-209ENST00000533096 OCIAD2Q56VL3 154 aa6.6□□□□□ -1.35
COPB1-209ENST00000533096 IGFL1Q6UW32 110 aa6.6□□□□□ -1.35
COPB1-209ENST00000533096 LST1O00453 97 aa6.59□□□□□ -1.35
COPB1-209ENST00000533096 VAMP3Q15836 100 aa6.59□□□□□ -1.35
COPB1-209ENST00000533096 Q6JHZ5 121 aa6.59□□□□□ -1.35
COPB1-209ENST00000533096 LINC01545Q5VT33 79 aa6.58□□□□□ -1.36
COPB1-209ENST00000533096 COPS9Q8WXC6 57 aa6.58□□□□□ -1.36
COPB1-209ENST00000533096 CLEC2BQ92478 149 aa6.58□□□□□ -1.36
COPB1-209ENST00000533096 IFITM1P13164 125 aa6.57□□□□□ -1.36
COPB1-209ENST00000533096 Q6ZQY7 126 aa6.57□□□□□ -1.36
COPB1-209ENST00000533096 TRAV13-2A0A0B4J235 113 aa6.56□□□□□ -1.36
COPB1-209ENST00000533096 MT1FP04733 61 aa6.56□□□□□ -1.36
COPB1-209ENST00000533096 PET117Q6UWS5 81 aa6.56□□□□□ -1.36
COPB1-209ENST00000533096 LINC00575Q6W349 94 aa6.56□□□□□ -1.36
COPB1-209ENST00000533096 hADV29S1A0JD25 119 aa6.55□□□□□ -1.36
COPB1-209ENST00000533096 SNHG12Q9BXW3 62 aa6.55□□□□□ -1.36
COPB1-209ENST00000533096 KRTAP9-3Q9BYQ3 159 aa6.55□□□□□ -1.36
COPB1-209ENST00000533096 COLCA2A8K830 154 aa6.53□□□□□ -1.36
COPB1-209ENST00000533096 H3BUT2 72 aa6.53□□□□□ -1.36
COPB1-209ENST00000533096 C20orf166-AS1Q96NR2 134 aa6.53□□□□□ -1.36
COPB1-209ENST00000533096 A8MUU9 505 aa6.52□□□□□ -1.37
COPB1-209ENST00000533096 C3orf79P0CE67 100 aa6.52□□□□□ -1.37
COPB1-209ENST00000533096 KRTDAPP60985 99 aa6.52□□□□□ -1.37
COPB1-209ENST00000533096 ANKRD39Q53RE8 183 aa6.52□□□□□ -1.37
COPB1-209ENST00000533096 Q6ZVH6 145 aa6.52□□□□□ -1.37
COPB1-209ENST00000533096 DSCR10P59022 87 aa6.51□□□□□ -1.37
COPB1-209ENST00000533096 ATOH7Q8N100 152 aa6.5□□□□□ -1.37
COPB1-209ENST00000533096 LINC00846Q9NV44 126 aa6.49□□□□□ -1.37
COPB1-209ENST00000533096 KRTAP16-1A8MUX0 517 aa6.48□□□□□ -1.37
COPB1-209ENST00000533096 RBM12B-AS1Q9P1G2 102 aa6.48□□□□□ -1.37
COPB1-209ENST00000533096 HIST1H2BKO60814 126 aa6.47□□□□□ -1.37
COPB1-209ENST00000533096 HIST1H2BJP06899 126 aa6.47□□□□□ -1.37
COPB1-209ENST00000533096 HIST1H2BOP23527 126 aa6.47□□□□□ -1.37
COPB1-209ENST00000533096 HIST1H2BBP33778 126 aa6.47□□□□□ -1.37
COPB1-209ENST00000533096 HIST1H2BDP58876 126 aa6.47□□□□□ -1.37
COPB1-209ENST00000533096 HIST1H2BCP62807 126 aa6.47□□□□□ -1.37
COPB1-209ENST00000533096 HIST2H2BEQ16778 126 aa6.47□□□□□ -1.37
COPB1-209ENST00000533096 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.47□□□□□ -1.37
COPB1-209ENST00000533096 HIST1H2BHQ93079 126 aa6.47□□□□□ -1.37
COPB1-209ENST00000533096 HIST1H2BNQ99877 126 aa6.47□□□□□ -1.37
COPB1-209ENST00000533096 HIST1H2BMQ99879 126 aa6.47□□□□□ -1.37
COPB1-209ENST00000533096 SS18L2Q9UHA2 77 aa6.46□□□□□ -1.38
COPB1-209ENST00000533096 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.45□□□□□ -1.38
COPB1-209ENST00000533096 A0A087WSZ3 146 aa6.43□□□□□ -1.38
COPB1-209ENST00000533096 SCGB1D1O95968 90 aa6.43□□□□□ -1.38
COPB1-209ENST00000533096 LOC100996750A0A140TA64 210 aa6.42□□□□□ -1.38
COPB1-209ENST00000533096 TEN1Q86WV5 123 aa6.42□□□□□ -1.38
COPB1-209ENST00000533096 KRTAP4-6Q9BYQ5 205 aa6.42□□□□□ -1.38
COPB1-209ENST00000533096 HRES1P13985 223 aa6.41□□□□□ -1.38
COPB1-209ENST00000533096 LINC00313P59037 77 aa6.41□□□□□ -1.38
COPB1-209ENST00000533096 C12orf57Q99622 126 aa6.41□□□□□ -1.38
COPB1-209ENST00000533096 SIGMAR1Q99720 223 aa6.41□□□□□ -1.38
COPB1-209ENST00000533096 PPDPFLQ8WWR9 84 aa6.4□□□□□ -1.38
COPB1-209ENST00000533096 KRTAP19-6Q3LI70 58 aa6.39□□□□□ -1.39
COPB1-209ENST00000533096 MACF1Q9UPN3 7388 aaKnown RBP6.39□□□□□ -1.39
COPB1-209ENST00000533096 NDUFV3P56181 108 aaKnown RBP6.38□□□□□ -1.39
COPB1-209ENST00000533096 BVES-AS1Q5T3Y7 98 aa6.38□□□□□ -1.39
COPB1-209ENST00000533096 NOTCH2NLQ7Z3S9 236 aa6.38□□□□□ -1.39
COPB1-209ENST00000533096 MPLKIPQ8TAP9 179 aa6.37□□□□□ -1.39
COPB1-209ENST00000533096 SYNE2Q8WXH0 6885 aaKnown RBP6.36□□□□□ -1.39
COPB1-209ENST00000533096 IGKV4-1P06312 121 aa6.36□□□□□ -1.39
COPB1-209ENST00000533096 H3BMG7 143 aa6.35□□□□□ -1.39
COPB1-209ENST00000533096 DEFB116Q30KQ4 102 aa6.35□□□□□ -1.39
COPB1-209ENST00000533096 MTURNQ8N3F0 131 aa6.35□□□□□ -1.39
COPB1-209ENST00000533096 SNCGO76070 127 aa6.34□□□□□ -1.39
COPB1-209ENST00000533096 KRTAP6-3Q3LI67 103 aa6.34□□□□□ -1.39
COPB1-209ENST00000533096 FABP2P12104 132 aa6.33□□□□□ -1.4
COPB1-209ENST00000533096 IGHV6-1A0A0B4J1U7 121 aa6.31□□□□□ -1.4
COPB1-209ENST00000533096 SNRPEP62304 92 aaKnown RBP6.31□□□□□ -1.4
COPB1-209ENST00000533096 HIST1H4GQ99525 98 aa6.31□□□□□ -1.4
COPB1-209ENST00000533096 A0A1W2PNM2 257 aa6.3□□□□□ -1.4
COPB1-209ENST00000533096 Q8N9P0 234 aaPredicted RBP6.3□□□□□ -1.4
COPB1-209ENST00000533096 A0A1B0GV72 72 aa6.29□□□□□ -1.4
COPB1-209ENST00000533096 HSBP1L1C9JCN9 74 aa6.29□□□□□ -1.4
COPB1-209ENST00000533096 COA6Q5JTJ3 125 aaKnown RBP6.29□□□□□ -1.4
COPB1-209ENST00000533096 FAM218AQ96MZ4 157 aa6.28□□□□□ -1.4
COPB1-209ENST00000533096 H0YGX0 51 aa6.27□□□□□ -1.41
COPB1-209ENST00000533096 SPINK7P58062 85 aa6.26□□□□□ -1.41
COPB1-209ENST00000533096 ANKRD29Q8N6D5 301 aa6.26□□□□□ -1.41
COPB1-209ENST00000533096 RAB37Q96AX2 223 aa6.26□□□□□ -1.41
COPB1-209ENST00000533096 A8MWP4 228 aa6.24□□□□□ -1.41
COPB1-209ENST00000533096 GHRHP01286 108 aa6.22□□□□□ -1.41
COPB1-209ENST00000533096 LINC00472Q9H8W2 130 aa6.21□□□□□ -1.42
COPB1-209ENST00000533096 TRBV7-4A0A0J9YYF1 115 aa6.2□□□□□ -1.42
COPB1-209ENST00000533096 ZCCHC13Q8WW36 166 aaKnown RBP6.2□□□□□ -1.42
COPB1-209ENST00000533096 S100A2P29034 98 aa6.18□□□□□ -1.42
COPB1-209ENST00000533096 LYRM7Q5U5X0 104 aa6.18□□□□□ -1.42
COPB1-209ENST00000533096 TRACP01848 142 aa6.17□□□□□ -1.42
COPB1-209ENST00000533096 CCKP06307 115 aa6.17□□□□□ -1.42
COPB1-209ENST00000533096 WFDC13Q8IUB5 93 aa6.17□□□□□ -1.42
COPB1-209ENST00000533096 A0A1B0GVX0 72 aa6.16□□□□□ -1.42
COPB1-209ENST00000533096 C8orf87E5RJ46 101 aa6.16□□□□□ -1.42
COPB1-209ENST00000533096 VPS25Q9BRG1 176 aa6.16□□□□□ -1.42
COPB1-209ENST00000533096 HIST1H2BLQ99880 126 aa6.15□□□□□ -1.42
COPB1-209ENST00000533096 A0A1B0GX51 115 aa6.14□□□□□ -1.43
COPB1-209ENST00000533096 COX8AP10176 69 aa6.14□□□□□ -1.43
COPB1-209ENST00000533096 HIST3H2BBQ8N257 126 aa6.14□□□□□ -1.43
COPB1-209ENST00000533096 A0A0B4J2C4 111 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms