RNA–Protein interactions for RNA: ENST00000532575.1

CDC27-208, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 765 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-208ENST00000532575 Q5XG85 94 aa4.35□□□□□ -1.71
CDC27-208ENST00000532575 PMCHL2Q9BQD1 86 aa4.35□□□□□ -1.71
CDC27-208ENST00000532575 OCR1Q9BZK8 76 aa4.35□□□□□ -1.71
CDC27-208ENST00000532575 PRO1933Q9H354 126 aa4.35□□□□□ -1.71
CDC27-208ENST00000532575 FABP4P15090 132 aa4.34□□□□□ -1.71
CDC27-208ENST00000532575 NMUP48645 174 aa4.34□□□□□ -1.71
CDC27-208ENST00000532575 FLGP20930 4061 aaPredicted RBP4.33□□□□□ -1.72
CDC27-208ENST00000532575 KRTAP9-6A8MVA2 160 aa4.33□□□□□ -1.72
CDC27-208ENST00000532575 J3QQQ9 107 aa4.33□□□□□ -1.72
CDC27-208ENST00000532575 AKR1D1P51857 326 aa4.33□□□□□ -1.72
CDC27-208ENST00000532575 HERVK_113P61574 105 aa4.33□□□□□ -1.72
CDC27-208ENST00000532575 TAL2Q16559 108 aa4.33□□□□□ -1.72
CDC27-208ENST00000532575 C1orf195Q5TG92 126 aa4.33□□□□□ -1.72
CDC27-208ENST00000532575 TEX49A0A1B0GTD5 131 aa4.31□□□□□ -1.72
CDC27-208ENST00000532575 LEPROTL1O95214 131 aa4.31□□□□□ -1.72
CDC27-208ENST00000532575 LGALS3P17931 250 aaKnown RBP4.31□□□□□ -1.72
CDC27-208ENST00000532575 PLNP26678 52 aa4.31□□□□□ -1.72
CDC27-208ENST00000532575 Q6Q795 121 aa4.31□□□□□ -1.72
CDC27-208ENST00000532575 OR13C6PQ8NH95 151 aa4.31□□□□□ -1.72
CDC27-208ENST00000532575 TCL1BO95988 128 aa4.3□□□□□ -1.72
CDC27-208ENST00000532575 Q1RN00 199 aa4.3□□□□□ -1.72
CDC27-208ENST00000532575 DEFB105AQ8NG35 78 aa4.3□□□□□ -1.72
CDC27-208ENST00000532575 HIST1H2BKO60814 126 aa4.29□□□□□ -1.72
CDC27-208ENST00000532575 HIST1H2BJP06899 126 aa4.29□□□□□ -1.72
CDC27-208ENST00000532575 HIST1H2BOP23527 126 aa4.29□□□□□ -1.72
CDC27-208ENST00000532575 COX7BP24311 80 aa4.29□□□□□ -1.72
CDC27-208ENST00000532575 HIST1H2BBP33778 126 aa4.29□□□□□ -1.72
CDC27-208ENST00000532575 HIST1H2BDP58876 126 aa4.29□□□□□ -1.72
CDC27-208ENST00000532575 NPC2P61916 151 aa4.29□□□□□ -1.72
CDC27-208ENST00000532575 HIST1H2BCP62807 126 aa4.29□□□□□ -1.72
CDC27-208ENST00000532575 HIST2H2BEQ16778 126 aa4.29□□□□□ -1.72
CDC27-208ENST00000532575 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.29□□□□□ -1.72
CDC27-208ENST00000532575 SOSTDC1Q6X4U4 206 aa4.29□□□□□ -1.72
CDC27-208ENST00000532575 HIST1H2BHQ93079 126 aa4.29□□□□□ -1.72
CDC27-208ENST00000532575 HIST1H2BNQ99877 126 aa4.29□□□□□ -1.72
CDC27-208ENST00000532575 HIST1H2BMQ99879 126 aa4.29□□□□□ -1.72
CDC27-208ENST00000532575 SPANXCQ9NY87 97 aa4.29□□□□□ -1.72
CDC27-208ENST00000532575 DPM2O94777 84 aa4.28□□□□□ -1.72
CDC27-208ENST00000532575 ELOF1P60002 83 aaKnown RBP4.28□□□□□ -1.72
CDC27-208ENST00000532575 ATP11AUNQ6ZP68 121 aa4.28□□□□□ -1.72
CDC27-208ENST00000532575 SPANXDQ9BXN6 97 aa4.28□□□□□ -1.72
CDC27-208ENST00000532575 A0A0J9YXY3 114 aa4.27□□□□□ -1.73
CDC27-208ENST00000532575 IGKCP01834 107 aa4.27□□□□□ -1.73
CDC27-208ENST00000532575 HSPB8Q9UJY1 196 aa4.27□□□□□ -1.73
CDC27-208ENST00000532575 C6orf99Q4VX62 202 aa4.26□□□□□ -1.73
CDC27-208ENST00000532575 LINC00518Q8N0U6 118 aa4.26□□□□□ -1.73
CDC27-208ENST00000532575 TTTY13Q9BZ97 58 aa4.26□□□□□ -1.73
CDC27-208ENST00000532575 SSPOA2VEC9 5147 aa4.26□□□□□ -1.73
CDC27-208ENST00000532575 TRBV7-6A0A0J9YX20 115 aa4.25□□□□□ -1.73
CDC27-208ENST00000532575 C20orf202A1L168 122 aa4.25□□□□□ -1.73
CDC27-208ENST00000532575 SYS1-DBNDD2H3BUS1 97 aa4.25□□□□□ -1.73
CDC27-208ENST00000532575 LINC00308Q8TCZ7 52 aa4.25□□□□□ -1.73
CDC27-208ENST00000532575 USH2AO75445 5202 aa4.24□□□□□ -1.73
CDC27-208ENST00000532575 A0A1B0GWB2 263 aa4.24□□□□□ -1.73
CDC27-208ENST00000532575 E9PLD3 99 aa4.24□□□□□ -1.73
CDC27-208ENST00000532575 TIMM17BO60830 172 aa4.24□□□□□ -1.73
CDC27-208ENST00000532575 PCP2Q8IVA1 136 aa4.24□□□□□ -1.73
CDC27-208ENST00000532575 IGLV5-48A0A075B6I7 105 aa4.23□□□□□ -1.73
CDC27-208ENST00000532575 TRBV20-1A0A075B6N2 111 aa4.23□□□□□ -1.73
CDC27-208ENST00000532575 C3orf79P0CE67 100 aa4.23□□□□□ -1.73
CDC27-208ENST00000532575 LINC01545Q5VT33 79 aa4.23□□□□□ -1.73
CDC27-208ENST00000532575 A0A0G2JQZ4 141 aa4.22□□□□□ -1.73
CDC27-208ENST00000532575 A4D1N5 150 aa4.22□□□□□ -1.73
CDC27-208ENST00000532575 NHP2Q9NX24 153 aaKnown RBP4.22□□□□□ -1.73
CDC27-208ENST00000532575 FCGBPQ9Y6R7 5405 aaPredicted RBP4.21□□□□□ -1.74
CDC27-208ENST00000532575 F8WEM9 126 aa4.21□□□□□ -1.74
CDC27-208ENST00000532575 KRTDAPP60985 99 aa4.21□□□□□ -1.74
CDC27-208ENST00000532575 ATOH7Q8N100 152 aa4.21□□□□□ -1.74
CDC27-208ENST00000532575 OBSCN-AS1Q96MR7 158 aa4.21□□□□□ -1.74
CDC27-208ENST00000532575 MACF1Q9UPN3 7388 aaKnown RBP4.21□□□□□ -1.74
CDC27-208ENST00000532575 COA6Q5JTJ3 125 aaKnown RBP4.2□□□□□ -1.74
CDC27-208ENST00000532575 COPS9Q8WXC6 57 aa4.2□□□□□ -1.74
CDC27-208ENST00000532575 LINC00846Q9NV44 126 aa4.2□□□□□ -1.74
CDC27-208ENST00000532575 Q6JHZ5 121 aa4.19□□□□□ -1.74
CDC27-208ENST00000532575 A6NDN8 102 aa4.18□□□□□ -1.74
CDC27-208ENST00000532575 ZNF815PA8K554 130 aa4.18□□□□□ -1.74
CDC27-208ENST00000532575 SYNE2Q8WXH0 6885 aaKnown RBP4.18□□□□□ -1.74
CDC27-208ENST00000532575 TRBV7-7A0A0K0K1E9 115 aa4.17□□□□□ -1.74
CDC27-208ENST00000532575 Q96NJ1 140 aa4.17□□□□□ -1.74
CDC27-208ENST00000532575 MT2AP02795 61 aa4.16□□□□□ -1.74
CDC27-208ENST00000532575 CLEC2BQ92478 149 aa4.16□□□□□ -1.74
CDC27-208ENST00000532575 TRAV13-2A0A0B4J235 113 aa4.15□□□□□ -1.75
CDC27-208ENST00000532575 LST1O00453 97 aa4.15□□□□□ -1.75
CDC27-208ENST00000532575 IFITM1P13164 125 aa4.15□□□□□ -1.75
CDC27-208ENST00000532575 VAMP3Q15836 100 aa4.15□□□□□ -1.75
CDC27-208ENST00000532575 HIST3H2BBQ8N257 126 aa4.15□□□□□ -1.75
CDC27-208ENST00000532575 C20orf166-AS1Q96NR2 134 aa4.15□□□□□ -1.75
CDC27-208ENST00000532575 FAM236DA0A1B0GTK5 79 aa4.14□□□□□ -1.75
CDC27-208ENST00000532575 FAM236CP0DP71 79 aa4.14□□□□□ -1.75
CDC27-208ENST00000532575 KRTAP10-10P60014 251 aa4.14□□□□□ -1.75
CDC27-208ENST00000532575 IGFL1Q6UW32 110 aa4.14□□□□□ -1.75
CDC27-208ENST00000532575 SCGB1D4Q6XE38 83 aa4.14□□□□□ -1.75
CDC27-208ENST00000532575 Q6ZVH6 145 aa4.14□□□□□ -1.75
CDC27-208ENST00000532575 HIST1H2BLQ99880 126 aa4.14□□□□□ -1.75
CDC27-208ENST00000532575 A8MUU9 505 aa4.13□□□□□ -1.75
CDC27-208ENST00000532575 OCIAD2Q56VL3 154 aa4.13□□□□□ -1.75
CDC27-208ENST00000532575 MUSTN1Q8IVN3 82 aa4.13□□□□□ -1.75
CDC27-208ENST00000532575 A8MU10 97 aa4.12□□□□□ -1.75
CDC27-208ENST00000532575 SMIM11BQ8TCY0 68 aa4.12□□□□□ -1.75
CDC27-208ENST00000532575 hADV29S1A0JD25 119 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms