RNA–Protein interactions for RNA: ENST00000531709.6

NXF1-211, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best) BASIC

Gene NXF1, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-211ENST00000531709 IGFL1Q6UW32 110 aa7.27□□□□□ -1.25
NXF1-211ENST00000531709 EPM2AB3EWF7 344 aa7.26□□□□□ -1.25
NXF1-211ENST00000531709 FP248Q71RG6 208 aaPredicted RBP7.26□□□□□ -1.25
NXF1-211ENST00000531709 STAB2Q8WWQ8 2551 aa7.26□□□□□ -1.25
NXF1-211ENST00000531709 TLX1NBP0CAT3 122 aa7.26□□□□□ -1.25
NXF1-211ENST00000531709 C14orf177Q52M58 125 aa7.26□□□□□ -1.25
NXF1-211ENST00000531709 A0A1B0GW54 56 aa7.25□□□□□ -1.25
NXF1-211ENST00000531709 FAM229BQ4G0N7 80 aa7.25□□□□□ -1.25
NXF1-211ENST00000531709 DSCR10P59022 87 aa7.24□□□□□ -1.25
NXF1-211ENST00000531709 H0Y9P7 68 aa7.24□□□□□ -1.25
NXF1-211ENST00000531709 C16orf90A8MZG2 172 aa7.23□□□□□ -1.25
NXF1-211ENST00000531709 C1orf64Q8NEQ6 169 aa7.22□□□□□ -1.25
NXF1-211ENST00000531709 PLA2G2DQ9UNK4 145 aa7.22□□□□□ -1.25
NXF1-211ENST00000531709 PCOTHQ58A44 107 aa7.21□□□□□ -1.25
NXF1-211ENST00000531709 KMT2BQ9UMN6 2715 aaPredicted RBP7.21□□□□□ -1.26
NXF1-211ENST00000531709 SPINK6Q6UWN8 80 aa7.2□□□□□ -1.26
NXF1-211ENST00000531709 ANK3Q12955 4377 aaKnown RBP7.2□□□□□ -1.26
NXF1-211ENST00000531709 K7EIL1 84 aa7.19□□□□□ -1.26
NXF1-211ENST00000531709 SPTSSBQ8NFR3 76 aa7.19□□□□□ -1.26
NXF1-211ENST00000531709 SPRR4Q96PI1 79 aa7.18□□□□□ -1.26
NXF1-211ENST00000531709 SPRR1AP35321 89 aa7.18□□□□□ -1.26
NXF1-211ENST00000531709 IGHV6-1A0A0B4J1U7 121 aa7.17□□□□□ -1.26
NXF1-211ENST00000531709 CHKB-CPT1BH3BT56 60 aa7.17□□□□□ -1.26
NXF1-211ENST00000531709 IGLV5-37A0A075B6J1 123 aa7.17□□□□□ -1.26
NXF1-211ENST00000531709 C4orf48Q5BLP8 95 aa7.17□□□□□ -1.26
NXF1-211ENST00000531709 KRTAP4-16G5E9R7 235 aaPredicted RBP7.16□□□□□ -1.26
NXF1-211ENST00000531709 KRTAP7-1Q8IUC3 87 aa7.14□□□□□ -1.27
NXF1-211ENST00000531709 TNP2Q05952 138 aa7.14□□□□□ -1.27
NXF1-211ENST00000531709 hDV103S1A0JD37 113 aa7.14□□□□□ -1.27
NXF1-211ENST00000531709 PRR15LQ9BU68 103 aa7.14□□□□□ -1.27
NXF1-211ENST00000531709 A8MUN3 132 aa7.12□□□□□ -1.27
NXF1-211ENST00000531709 KRTAP1-5Q9BYS1 174 aa7.12□□□□□ -1.27
NXF1-211ENST00000531709 PRR15Q8IV56 129 aa7.12□□□□□ -1.27
NXF1-211ENST00000531709 A6NED7 52 aa7.11□□□□□ -1.27
NXF1-211ENST00000531709 A8MWP4 228 aa7.11□□□□□ -1.27
NXF1-211ENST00000531709 MDFIQ99750 246 aa7.11□□□□□ -1.27
NXF1-211ENST00000531709 TRAV22A0A0B4J277 110 aa7.1□□□□□ -1.27
NXF1-211ENST00000531709 MOBPQ13875 183 aa7.09□□□□□ -1.27
NXF1-211ENST00000531709 ANAPC11Q9NYG5 84 aa7.09□□□□□ -1.27
NXF1-211ENST00000531709 TENM2Q9NT68 2774 aa7.09□□□□□ -1.27
NXF1-211ENST00000531709 PMAIP1Q13794 54 aa7.08□□□□□ -1.28
NXF1-211ENST00000531709 CNBPP62633 177 aaKnown RBP7.07□□□□□ -1.28
NXF1-211ENST00000531709 CIRBP-AS1Q8TBR5 109 aa7.07□□□□□ -1.28
NXF1-211ENST00000531709 NBDYA0A0U1RRE5 68 aa7.07□□□□□ -1.28
NXF1-211ENST00000531709 C9orf163Q8N9P6 203 aa7.06□□□□□ -1.28
NXF1-211ENST00000531709 SRRM2Q9UQ35 2752 aaKnown RBP7.04□□□□□ -1.28
NXF1-211ENST00000531709 ZNF706Q9Y5V0 76 aaPredicted RBP7.04□□□□□ -1.28
NXF1-211ENST00000531709 SPAG11AQ6PDA7 123 aa7.04□□□□□ -1.28
NXF1-211ENST00000531709 RETNLBQ9BQ08 111 aa7.03□□□□□ -1.28
NXF1-211ENST00000531709 KRTAP11-1Q8IUC1 163 aa7.03□□□□□ -1.28
NXF1-211ENST00000531709 NUPR2A6NF83 97 aa7.03□□□□□ -1.28
NXF1-211ENST00000531709 APLNQ9ULZ1 77 aa7.02□□□□□ -1.29
NXF1-211ENST00000531709 H3BPC8 53 aa7.01□□□□□ -1.29
NXF1-211ENST00000531709 COA5Q86WW8 74 aa7□□□□□ -1.29
NXF1-211ENST00000531709 LIMD2Q9BT23 127 aa7□□□□□ -1.29
NXF1-211ENST00000531709 IGLV5-52A0A0A0MRZ9 124 aa6.99□□□□□ -1.29
NXF1-211ENST00000531709 Q1T7F1 81 aa6.99□□□□□ -1.29
NXF1-211ENST00000531709 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.99□□□□□ -1.29
NXF1-211ENST00000531709 LY6G6CO95867 125 aa6.99□□□□□ -1.29
NXF1-211ENST00000531709 ZCCHC13Q8WW36 166 aaKnown RBP6.99□□□□□ -1.29
NXF1-211ENST00000531709 PANO1I0J062 215 aa6.98□□□□□ -1.29
NXF1-211ENST00000531709 CYP4F30PQ9H0H9 118 aa6.98□□□□□ -1.29
NXF1-211ENST00000531709 LINC00472Q9H8W2 130 aa6.98□□□□□ -1.29
NXF1-211ENST00000531709 TP53AIP1Q9HCN2 124 aa6.98□□□□□ -1.29
NXF1-211ENST00000531709 C8orf17Q9NRJ1 99 aa6.98□□□□□ -1.29
NXF1-211ENST00000531709 RTL8CO15255 209 aa6.97□□□□□ -1.29
NXF1-211ENST00000531709 IGLV8-61A0A075B6I0 122 aa6.97□□□□□ -1.29
NXF1-211ENST00000531709 PSORS1C2Q9UIG4 136 aa6.95□□□□□ -1.3
NXF1-211ENST00000531709 CSMD3Q7Z407 3707 aa6.95□□□□□ -1.3
NXF1-211ENST00000531709 MMP24-AS1A0A0U1RRL7 71 aa6.94□□□□□ -1.3
NXF1-211ENST00000531709 MRPL34Q9BQ48 92 aaKnown RBP6.94□□□□□ -1.3
NXF1-211ENST00000531709 LCE6AA0A183 80 aa6.93□□□□□ -1.3
NXF1-211ENST00000531709 KRTAP29-1A8MX34 341 aaPredicted RBP6.93□□□□□ -1.3
NXF1-211ENST00000531709 SPANXA2-OT1Q8N9U9 137 aa6.93□□□□□ -1.3
NXF1-211ENST00000531709 A0A1B0GVX0 72 aa6.93□□□□□ -1.3
NXF1-211ENST00000531709 H3BS24 57 aa6.93□□□□□ -1.3
NXF1-211ENST00000531709 A0A087WTM6 91 aa6.92□□□□□ -1.3
NXF1-211ENST00000531709 SPRR1BP22528 89 aa6.91□□□□□ -1.3
NXF1-211ENST00000531709 CD164Q04900 197 aa6.91□□□□□ -1.3
NXF1-211ENST00000531709 Q8N9P0 234 aaPredicted RBP6.91□□□□□ -1.3
NXF1-211ENST00000531709 C1orf134Q5TEV5 83 aa6.9□□□□□ -1.3
NXF1-211ENST00000531709 ZNF861PO60384 105 aa6.9□□□□□ -1.31
NXF1-211ENST00000531709 Q5VV11 94 aa6.87□□□□□ -1.31
NXF1-211ENST00000531709 COL7A1Q02388 2944 aa6.87□□□□□ -1.31
NXF1-211ENST00000531709 SPACA4Q8TDM5 124 aa6.87□□□□□ -1.31
NXF1-211ENST00000531709 IGLV7-46A0A075B6I9 117 aa6.86□□□□□ -1.31
NXF1-211ENST00000531709 A8MU10 97 aa6.86□□□□□ -1.31
NXF1-211ENST00000531709 LOC101927531A0A1B0GV80 90 aa6.85□□□□□ -1.31
NXF1-211ENST00000531709 PRR26Q8N8Z3 221 aa6.85□□□□□ -1.31
NXF1-211ENST00000531709 IGKV2D-30A0A075B6S6 120 aa6.84□□□□□ -1.31
NXF1-211ENST00000531709 IGKV2-30P06310 120 aa6.84□□□□□ -1.31
NXF1-211ENST00000531709 TGP01266 2768 aa6.84□□□□□ -1.32
NXF1-211ENST00000531709 A0A087X002 238 aa6.82□□□□□ -1.32
NXF1-211ENST00000531709 NOTCH2NLQ7Z3S9 236 aa6.82□□□□□ -1.32
NXF1-211ENST00000531709 LINC00313P59037 77 aa6.82□□□□□ -1.32
NXF1-211ENST00000531709 WWC2-AS2Q96NR7 200 aa6.81□□□□□ -1.32
NXF1-211ENST00000531709 ACYP2P14621 99 aa6.81□□□□□ -1.32
NXF1-211ENST00000531709 SPINK1P00995 79 aa6.81□□□□□ -1.32
NXF1-211ENST00000531709 IGLV7-43P04211 117 aa6.8□□□□□ -1.32
NXF1-211ENST00000531709 HRES1P13985 223 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms