RNA–Protein interactions for RNA: ENST00000531582.1

ECHDC1-221, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 4

Gene ECHDC1, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-221ENST00000531582 SPINT4Q6UDR6 99 aa2.88□□□□□ -1.95
ECHDC1-221ENST00000531582 CFAP46Q8IYW2 2715 aa2.88□□□□□ -1.95
ECHDC1-221ENST00000531582 GVQW2A0A096LPI5 108 aaPredicted RBP2.87□□□□□ -1.95
ECHDC1-221ENST00000531582 A8MTW9 85 aa2.87□□□□□ -1.95
ECHDC1-221ENST00000531582 C14orf177Q52M58 125 aa2.87□□□□□ -1.95
ECHDC1-221ENST00000531582 ANAPC11Q9NYG5 84 aa2.87□□□□□ -1.95
ECHDC1-221ENST00000531582 MAST4O15021 2626 aa2.87□□□□□ -1.95
ECHDC1-221ENST00000531582 ALMS1Q8TCU4 4167 aa2.86□□□□□ -1.95
ECHDC1-221ENST00000531582 MYO18BQ8IUG5 2567 aa2.86□□□□□ -1.95
ECHDC1-221ENST00000531582 A0A087WTM6 91 aa2.86□□□□□ -1.95
ECHDC1-221ENST00000531582 IGKV2-24A0A0C4DH68 120 aa2.86□□□□□ -1.95
ECHDC1-221ENST00000531582 H3BUA1 57 aa2.86□□□□□ -1.95
ECHDC1-221ENST00000531582 WFDC13Q8IUB5 93 aa2.86□□□□□ -1.95
ECHDC1-221ENST00000531582 MINOS1-NBL1R4GNA1 71 aa2.86□□□□□ -1.95
ECHDC1-221ENST00000531582 AHCTF1Q8WYP5 2266 aa2.86□□□□□ -1.95
ECHDC1-221ENST00000531582 PIEZO2Q9H5I5 2752 aa2.85□□□□□ -1.95
ECHDC1-221ENST00000531582 DEFB131AP59861 70 aa2.85□□□□□ -1.95
ECHDC1-221ENST00000531582 CCL19Q99731 98 aa2.85□□□□□ -1.95
ECHDC1-221ENST00000531582 AKAP9Q99996 3911 aa2.85□□□□□ -1.95
ECHDC1-221ENST00000531582 WNK2Q9Y3S1 2297 aa2.85□□□□□ -1.95
ECHDC1-221ENST00000531582 UTP20O75691 2785 aaKnown RBP2.84□□□□□ -1.95
ECHDC1-221ENST00000531582 VPS13CQ709C8 3753 aa2.84□□□□□ -1.95
ECHDC1-221ENST00000531582 CSMD2Q7Z408 3487 aa2.84□□□□□ -1.95
ECHDC1-221ENST00000531582 A0A1W2PNU3 283 aaPredicted RBP2.84□□□□□ -1.95
ECHDC1-221ENST00000531582 INSP01308 110 aa2.84□□□□□ -1.95
ECHDC1-221ENST00000531582 WFDC10BQ8IUB3 73 aa2.84□□□□□ -1.95
ECHDC1-221ENST00000531582 Q8N377 158 aa2.84□□□□□ -1.95
ECHDC1-221ENST00000531582 USMG5Q96IX5 58 aa2.84□□□□□ -1.95
ECHDC1-221ENST00000531582 C6orf48Q9UBA6 75 aa2.84□□□□□ -1.95
ECHDC1-221ENST00000531582 CRYBG3Q68DQ2 2970 aa2.83□□□□□ -1.96
ECHDC1-221ENST00000531582 HECTD1Q9ULT8 2610 aa2.83□□□□□ -1.96
ECHDC1-221ENST00000531582 KRTAP7-1Q8IUC3 87 aa2.83□□□□□ -1.96
ECHDC1-221ENST00000531582 LINC00304Q8N9R0 145 aa2.83□□□□□ -1.96
ECHDC1-221ENST00000531582 MAPK1IP1LQ8NDC0 245 aa2.83□□□□□ -1.96
ECHDC1-221ENST00000531582 DEFB108BQ8NET1 73 aa2.83□□□□□ -1.96
ECHDC1-221ENST00000531582 ZNF462Q96JM2 2506 aa2.83□□□□□ -1.96
ECHDC1-221ENST00000531582 LY6G6CO95867 125 aa2.82□□□□□ -1.96
ECHDC1-221ENST00000531582 PCOTHQ58A44 107 aa2.82□□□□□ -1.96
ECHDC1-221ENST00000531582 COL6A6A6NMZ7 2263 aa2.82□□□□□ -1.96
ECHDC1-221ENST00000531582 PTPN13Q12923 2485 aa2.82□□□□□ -1.96
ECHDC1-221ENST00000531582 FLNCQ14315 2725 aa2.82□□□□□ -1.96
ECHDC1-221ENST00000531582 ZNF469Q96JG9 3925 aaPredicted RBP2.82□□□□□ -1.96
ECHDC1-221ENST00000531582 NBASA2RRP1 2371 aa2.81□□□□□ -1.96
ECHDC1-221ENST00000531582 PRRC2CQ9Y520 2896 aaKnown RBP2.81□□□□□ -1.96
ECHDC1-221ENST00000531582 A0A1B0GU33 70 aa2.81□□□□□ -1.96
ECHDC1-221ENST00000531582 KRTAP10-6P60371 365 aaPredicted RBP2.81□□□□□ -1.96
ECHDC1-221ENST00000531582 KRTAP11-1Q8IUC1 163 aa2.81□□□□□ -1.96
ECHDC1-221ENST00000531582 Q96NJ1 140 aa2.81□□□□□ -1.96
ECHDC1-221ENST00000531582 RHPN1-AS1Q9BWJ2 59 aa2.81□□□□□ -1.96
ECHDC1-221ENST00000531582 SPTA1P02549 2419 aa2.81□□□□□ -1.96
ECHDC1-221ENST00000531582 NBDYA0A0U1RRE5 68 aa2.8□□□□□ -1.96
ECHDC1-221ENST00000531582 FAM168BA1KXE4 195 aa2.8□□□□□ -1.96
ECHDC1-221ENST00000531582 DEFB109BQ30KR1 87 aa2.8□□□□□ -1.96
ECHDC1-221ENST00000531582 TEX15Q9BXT5 2789 aa2.8□□□□□ -1.96
ECHDC1-221ENST00000531582 TLN1Q9Y490 2541 aaKnown RBP2.79□□□□□ -1.96
ECHDC1-221ENST00000531582 MMP24-AS1A0A0U1RRL7 71 aa2.79□□□□□ -1.96
ECHDC1-221ENST00000531582 SPINK13Q1W4C9 94 aa2.79□□□□□ -1.96
ECHDC1-221ENST00000531582 CENPEQ02224 2701 aa2.78□□□□□ -1.96
ECHDC1-221ENST00000531582 CELSR2Q9HCU4 2923 aa2.78□□□□□ -1.96
ECHDC1-221ENST00000531582 CELSR1Q9NYQ6 3014 aa2.78□□□□□ -1.96
ECHDC1-221ENST00000531582 SPTAN1Q13813 2472 aaKnown RBP2.78□□□□□ -1.96
ECHDC1-221ENST00000531582 UNC79Q9P2D8 2635 aa2.77□□□□□ -1.97
ECHDC1-221ENST00000531582 USP9XQ93008 2570 aaPredicted RBP2.77□□□□□ -1.97
ECHDC1-221ENST00000531582 DNHD1Q96M86 4753 aa2.77□□□□□ -1.97
ECHDC1-221ENST00000531582 A0A0G2JQZ4 141 aa2.77□□□□□ -1.97
ECHDC1-221ENST00000531582 A0A1W2PNN7 141 aa2.77□□□□□ -1.97
ECHDC1-221ENST00000531582 DEFB116Q30KQ4 102 aa2.77□□□□□ -1.97
ECHDC1-221ENST00000531582 ITPR2Q14571 2701 aa2.77□□□□□ -1.97
ECHDC1-221ENST00000531582 TEP1Q99973 2627 aaKnown RBP2.77□□□□□ -1.97
ECHDC1-221ENST00000531582 UBR5O95071 2799 aaPredicted RBP2.77□□□□□ -1.97
ECHDC1-221ENST00000531582 SPTBN1Q01082 2364 aaKnown RBP2.76□□□□□ -1.97
ECHDC1-221ENST00000531582 LRBAP50851 2863 aa2.76□□□□□ -1.97
ECHDC1-221ENST00000531582 RP1L1Q8IWN7 2480 aaPredicted RBP2.76□□□□□ -1.97
ECHDC1-221ENST00000531582 DEFB1P60022 68 aa2.76□□□□□ -1.97
ECHDC1-221ENST00000531582 C5orf56Q8N8D9 126 aa2.76□□□□□ -1.97
ECHDC1-221ENST00000531582 LRRK2Q5S007 2527 aa2.76□□□□□ -1.97
ECHDC1-221ENST00000531582 NOTCH2Q04721 2471 aa2.75□□□□□ -1.97
ECHDC1-221ENST00000531582 RPL37AP61513 92 aaKnown RBP2.75□□□□□ -1.97
ECHDC1-221ENST00000531582 CLPSL2Q6UWE3 100 aa2.75□□□□□ -1.97
ECHDC1-221ENST00000531582 Q6ZRX8 168 aa2.75□□□□□ -1.97
ECHDC1-221ENST00000531582 SSBP3-AS1Q7Z2R9 100 aa2.75□□□□□ -1.97
ECHDC1-221ENST00000531582 ADGRG4Q8IZF6 3080 aa2.75□□□□□ -1.97
ECHDC1-221ENST00000531582 USP9YO00507 2555 aaPredicted RBP2.74□□□□□ -1.97
ECHDC1-221ENST00000531582 A0A1W2PPR1 153 aa2.74□□□□□ -1.97
ECHDC1-221ENST00000531582 SPRR1AP35321 89 aa2.74□□□□□ -1.97
ECHDC1-221ENST00000531582 DCHS2Q6V1P9 2916 aa2.74□□□□□ -1.97
ECHDC1-221ENST00000531582 CREBBPQ92793 2442 aa2.73□□□□□ -1.97
ECHDC1-221ENST00000531582 KRTAP10-7P60409 375 aaPredicted RBP2.73□□□□□ -1.97
ECHDC1-221ENST00000531582 LCE1EQ5T753 118 aa2.73□□□□□ -1.97
ECHDC1-221ENST00000531582 IGFL1Q6UW32 110 aa2.73□□□□□ -1.97
ECHDC1-221ENST00000531582 COX6B2Q6YFQ2 88 aa2.73□□□□□ -1.97
ECHDC1-221ENST00000531582 MRPL34Q9BQ48 92 aaKnown RBP2.73□□□□□ -1.97
ECHDC1-221ENST00000531582 TACC2O95359 2948 aa2.72□□□□□ -1.97
ECHDC1-221ENST00000531582 HIVEP3Q5T1R4 2406 aa2.72□□□□□ -1.97
ECHDC1-221ENST00000531582 UNQ6190/PRO20217Q6UXQ8 127 aa2.72□□□□□ -1.97
ECHDC1-221ENST00000531582 DEFB105AQ8NG35 78 aa2.72□□□□□ -1.97
ECHDC1-221ENST00000531582 C16orf74Q96GX8 76 aa2.72□□□□□ -1.97
ECHDC1-221ENST00000531582 PSORS1C2Q9UIG4 136 aa2.72□□□□□ -1.97
ECHDC1-221ENST00000531582 MYO9AB2RTY4 2548 aa2.72□□□□□ -1.97
ECHDC1-221ENST00000531582 POLQO75417 2590 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms