RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 PYY3Q5JQD4 70 aa12.23□□□□□ -0.45
TRAPPC4-210ENST00000531290 TMEM238LA0A1B0GVL6 79 aa12.22□□□□□ -0.45
TRAPPC4-210ENST00000531290 A6NJY4 79 aa12.22□□□□□ -0.45
TRAPPC4-210ENST00000531290 CD164Q04900 197 aa12.22□□□□□ -0.45
TRAPPC4-210ENST00000531290 C2orf91Q6ZV80 131 aa12.22□□□□□ -0.45
TRAPPC4-210ENST00000531290 CFC1BP0CG36 223 aa12.21□□□□□ -0.45
TRAPPC4-210ENST00000531290 CFC1P0CG37 223 aa12.21□□□□□ -0.45
TRAPPC4-210ENST00000531290 SNCGO76070 127 aa12.2□□□□□ -0.46
TRAPPC4-210ENST00000531290 CEND1Q8N111 149 aa12.2□□□□□ -0.46
TRAPPC4-210ENST00000531290 A0A0B4J2C4 111 aa12.19□□□□□ -0.46
TRAPPC4-210ENST00000531290 C9orf92A6NGG3 77 aa12.19□□□□□ -0.46
TRAPPC4-210ENST00000531290 F8WEM9 126 aa12.18□□□□□ -0.46
TRAPPC4-210ENST00000531290 SMIM29Q86T20 159 aa12.17□□□□□ -0.46
TRAPPC4-210ENST00000531290 Q6ZQY7 126 aa12.16□□□□□ -0.46
TRAPPC4-210ENST00000531290 H0YGX0 51 aa12.14□□□□□ -0.47
TRAPPC4-210ENST00000531290 PCOTHQ58A44 107 aa12.14□□□□□ -0.47
TRAPPC4-210ENST00000531290 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.14□□□□□ -0.47
TRAPPC4-210ENST00000531290 PRO1854Q9UHT4 67 aa12.13□□□□□ -0.47
TRAPPC4-210ENST00000531290 KRTAP9-6A0A140TA67 174 aa12.12□□□□□ -0.47
TRAPPC4-210ENST00000531290 Q5XG85 94 aa12.12□□□□□ -0.47
TRAPPC4-210ENST00000531290 IGLV8-61A0A075B6I0 122 aa12.11□□□□□ -0.47
TRAPPC4-210ENST00000531290 HSD52Q0P140 79 aa12.1□□□□□ -0.47
TRAPPC4-210ENST00000531290 UQCR10Q9UDW1 63 aa12.1□□□□□ -0.47
TRAPPC4-210ENST00000531290 FXYD2P54710 66 aa12.08□□□□□ -0.48
TRAPPC4-210ENST00000531290 PPDPFLQ8WWR9 84 aa12.08□□□□□ -0.48
TRAPPC4-210ENST00000531290 SNHG12Q9BXW3 62 aa12.08□□□□□ -0.48
TRAPPC4-210ENST00000531290 A0A0G2JQZ4 141 aa12.07□□□□□ -0.48
TRAPPC4-210ENST00000531290 C1orf195Q5TG92 126 aa12.07□□□□□ -0.48
TRAPPC4-210ENST00000531290 OCIAD2Q56VL3 154 aa12.05□□□□□ -0.48
TRAPPC4-210ENST00000531290 LCE2CQ5TA81 110 aa12.04□□□□□ -0.48
TRAPPC4-210ENST00000531290 Q6JHZ5 121 aa12.04□□□□□ -0.48
TRAPPC4-210ENST00000531290 GHRHP01286 108 aa12.03□□□□□ -0.48
TRAPPC4-210ENST00000531290 TCL1BO95988 128 aa12.02□□□□□ -0.49
TRAPPC4-210ENST00000531290 PSMB2P49721 201 aa12□□□□□ -0.49
TRAPPC4-210ENST00000531290 A0A1B0GX51 115 aa11.99□□□□□ -0.49
TRAPPC4-210ENST00000531290 LCE2DQ5TA82 110 aaPredicted RBP11.99□□□□□ -0.49
TRAPPC4-210ENST00000531290 KRTAP19-2Q3LHN2 52 aa11.98□□□□□ -0.49
TRAPPC4-210ENST00000531290 CLEC2BQ92478 149 aa11.98□□□□□ -0.49
TRAPPC4-210ENST00000531290 COX6CP09669 75 aa11.97□□□□□ -0.49
TRAPPC4-210ENST00000531290 FAM218AQ96MZ4 157 aa11.97□□□□□ -0.49
TRAPPC4-210ENST00000531290 TRIAP1O43715 76 aa11.96□□□□□ -0.49
TRAPPC4-210ENST00000531290 K7ERJ3 54 aa11.94□□□□□ -0.5
TRAPPC4-210ENST00000531290 RPL37P61927 97 aaKnown RBP11.94□□□□□ -0.5
TRAPPC4-210ENST00000531290 IGFL1Q6UW32 110 aa11.94□□□□□ -0.5
TRAPPC4-210ENST00000531290 DNAL4O96015 105 aa11.93□□□□□ -0.5
TRAPPC4-210ENST00000531290 MT1HP80294 61 aa11.93□□□□□ -0.5
TRAPPC4-210ENST00000531290 FABP2P12104 132 aa11.91□□□□□ -0.5
TRAPPC4-210ENST00000531290 NDUFV3P56181 108 aaKnown RBP11.91□□□□□ -0.5
TRAPPC4-210ENST00000531290 H3BUT2 72 aa11.9□□□□□ -0.5
TRAPPC4-210ENST00000531290 TRBV7-7A0A0K0K1E9 115 aa11.89□□□□□ -0.51
TRAPPC4-210ENST00000531290 H3BQ85 93 aa11.87□□□□□ -0.51
TRAPPC4-210ENST00000531290 SMIM6P0DI80 62 aa11.87□□□□□ -0.51
TRAPPC4-210ENST00000531290 H3BMG7 143 aa11.85□□□□□ -0.51
TRAPPC4-210ENST00000531290 SCGB1C2P0DMR2 95 aa11.85□□□□□ -0.51
TRAPPC4-210ENST00000531290 ORMDL1Q9P0S3 153 aa11.85□□□□□ -0.51
TRAPPC4-210ENST00000531290 M0R143 59 aa11.83□□□□□ -0.52
TRAPPC4-210ENST00000531290 COX6B2Q6YFQ2 88 aa11.82□□□□□ -0.52
TRAPPC4-210ENST00000531290 FSIP2Q5CZC0 6907 aa11.81□□□□□ -0.52
TRAPPC4-210ENST00000531290 TEN1Q86WV5 123 aa11.8□□□□□ -0.52
TRAPPC4-210ENST00000531290 SS18L2Q9UHA2 77 aa11.8□□□□□ -0.52
TRAPPC4-210ENST00000531290 TMEM256-PLSCR3K7ERE1 68 aa11.79□□□□□ -0.52
TRAPPC4-210ENST00000531290 M0R2T5 61 aa11.79□□□□□ -0.52
TRAPPC4-210ENST00000531290 Q6Q795 121 aa11.78□□□□□ -0.52
TRAPPC4-210ENST00000531290 LST1O00453 97 aa11.77□□□□□ -0.53
TRAPPC4-210ENST00000531290 CRCT1Q9UGL9 99 aa11.77□□□□□ -0.53
TRAPPC4-210ENST00000531290 TSTD3H0UI37 97 aa11.76□□□□□ -0.53
TRAPPC4-210ENST00000531290 TRACP01848 142 aa11.75□□□□□ -0.53
TRAPPC4-210ENST00000531290 OBSCN-AS1Q96MR7 158 aa11.75□□□□□ -0.53
TRAPPC4-210ENST00000531290 ATP11AUNQ6ZP68 121 aa11.74□□□□□ -0.53
TRAPPC4-210ENST00000531290 ANKRD29Q8N6D5 301 aa11.74□□□□□ -0.53
TRAPPC4-210ENST00000531290 KRTAP10-6P60371 365 aaPredicted RBP11.73□□□□□ -0.53
TRAPPC4-210ENST00000531290 LORP23490 312 aaPredicted RBP11.72□□□□□ -0.53
TRAPPC4-210ENST00000531290 Q75L30 129 aa11.7□□□□□ -0.54
TRAPPC4-210ENST00000531290 A0A087WSZ3 146 aa11.69□□□□□ -0.54
TRAPPC4-210ENST00000531290 A0A1B0GV72 72 aa11.69□□□□□ -0.54
TRAPPC4-210ENST00000531290 UBE2V1Q13404 147 aa11.69□□□□□ -0.54
TRAPPC4-210ENST00000531290 LOC105371267A0A1B0GV96 52 aa11.65□□□□□ -0.54
TRAPPC4-210ENST00000531290 Q96NJ1 140 aa11.65□□□□□ -0.54
TRAPPC4-210ENST00000531290 TRBV7-4A0A0J9YYF1 115 aa11.63□□□□□ -0.55
TRAPPC4-210ENST00000531290 A0A1W2PNM2 257 aa11.63□□□□□ -0.55
TRAPPC4-210ENST00000531290 ATXN8Q156A1 80 aa11.63□□□□□ -0.55
TRAPPC4-210ENST00000531290 BAALC-AS2P0C853 105 aa11.62□□□□□ -0.55
TRAPPC4-210ENST00000531290 BATFQ16520 125 aa11.62□□□□□ -0.55
TRAPPC4-210ENST00000531290 CCKP06307 115 aa11.61□□□□□ -0.55
TRAPPC4-210ENST00000531290 LYRM7Q5U5X0 104 aa11.61□□□□□ -0.55
TRAPPC4-210ENST00000531290 NAA38Q9BRA0 125 aaKnown RBP11.61□□□□□ -0.55
TRAPPC4-210ENST00000531290 FLGP20930 4061 aaPredicted RBP11.61□□□□□ -0.55
TRAPPC4-210ENST00000531290 RBM3P98179 157 aaKnown RBP11.6□□□□□ -0.55
TRAPPC4-210ENST00000531290 DSCR8Q96T75 97 aa11.6□□□□□ -0.55
TRAPPC4-210ENST00000531290 VPS25Q9BRG1 176 aa11.56□□□□□ -0.56
TRAPPC4-210ENST00000531290 C20orf166-AS1Q96NR2 134 aa11.53□□□□□ -0.56
TRAPPC4-210ENST00000531290 SIGMAR1Q99720 223 aa11.53□□□□□ -0.56
TRAPPC4-210ENST00000531290 TRBV20-1A0A075B6N2 111 aa11.52□□□□□ -0.57
TRAPPC4-210ENST00000531290 C9JAW5 83 aa11.52□□□□□ -0.57
TRAPPC4-210ENST00000531290 A8MUU9 505 aa11.5□□□□□ -0.57
TRAPPC4-210ENST00000531290 JMJD7-PLA2G4BH0Y9G9 81 aa11.5□□□□□ -0.57
TRAPPC4-210ENST00000531290 IGKV4-1P06312 121 aa11.5□□□□□ -0.57
TRAPPC4-210ENST00000531290 C21orf62-AS1Q17RA5 79 aa11.5□□□□□ -0.57
TRAPPC4-210ENST00000531290 DSCR10P59022 87 aa11.45□□□□□ -0.58
TRAPPC4-210ENST00000531290 C9orf118A6NHY6 69 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms