RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 TSPEAR-AS2P59090 65 aa4.17□□□□□ -1.74
CD44-232ENST00000531118 KRTDAPP60985 99 aa4.17□□□□□ -1.74
CD44-232ENST00000531118 COA6Q5JTJ3 125 aaKnown RBP4.17□□□□□ -1.74
CD44-232ENST00000531118 LINC01545Q5VT33 79 aa4.17□□□□□ -1.74
CD44-232ENST00000531118 ARL17AQ8IVW1 177 aa4.17□□□□□ -1.74
CD44-232ENST00000531118 TRBV10-2A0A0K0K1G8 114 aa4.16□□□□□ -1.74
CD44-232ENST00000531118 NDUFC2O95298 119 aa4.16□□□□□ -1.74
CD44-232ENST00000531118 S100A7L2Q5SY68 101 aa4.16□□□□□ -1.74
CD44-232ENST00000531118 SPANXB1Q9NS25 103 aaPredicted RBP4.16□□□□□ -1.74
CD44-232ENST00000531118 A0A0J9YXY3 114 aa4.15□□□□□ -1.75
CD44-232ENST00000531118 TIMM17BO60830 172 aa4.15□□□□□ -1.75
CD44-232ENST00000531118 SCGB1D1O95968 90 aa4.15□□□□□ -1.75
CD44-232ENST00000531118 C3orf79P0CE67 100 aa4.15□□□□□ -1.75
CD44-232ENST00000531118 DDTP30046 118 aa4.15□□□□□ -1.75
CD44-232ENST00000531118 C1orf195Q5TG92 126 aa4.15□□□□□ -1.75
CD44-232ENST00000531118 ST20-AS1Q8NBB2 130 aa4.15□□□□□ -1.75
CD44-232ENST00000531118 COPS9Q8WXC6 57 aa4.15□□□□□ -1.75
CD44-232ENST00000531118 ZNF815PA8K554 130 aa4.14□□□□□ -1.75
CD44-232ENST00000531118 H7C2G1 150 aa4.14□□□□□ -1.75
CD44-232ENST00000531118 S100A2P29034 98 aa4.14□□□□□ -1.75
CD44-232ENST00000531118 HINT1P49773 126 aaPredicted RBP4.14□□□□□ -1.75
CD44-232ENST00000531118 JOSD1Q15040 202 aaPredicted RBP4.14□□□□□ -1.75
CD44-232ENST00000531118 S100A6P06703 90 aa4.13□□□□□ -1.75
CD44-232ENST00000531118 SNRPEP62304 92 aaKnown RBP4.13□□□□□ -1.75
CD44-232ENST00000531118 Q5XG85 94 aa4.13□□□□□ -1.75
CD44-232ENST00000531118 SCGB1D4Q6XE38 83 aa4.13□□□□□ -1.75
CD44-232ENST00000531118 TRAV23DV6A0A075B6W5 121 aa4.12□□□□□ -1.75
CD44-232ENST00000531118 MT3P25713 68 aa4.12□□□□□ -1.75
CD44-232ENST00000531118 NPC2P61916 151 aa4.12□□□□□ -1.75
CD44-232ENST00000531118 CD164Q04900 197 aa4.12□□□□□ -1.75
CD44-232ENST00000531118 ADAMTSL4-AS1Q5T5F5 129 aa4.12□□□□□ -1.75
CD44-232ENST00000531118 LINC00518Q8N0U6 118 aa4.12□□□□□ -1.75
CD44-232ENST00000531118 LINC00308Q8TCZ7 52 aa4.12□□□□□ -1.75
CD44-232ENST00000531118 SPANXCQ9NY87 97 aa4.12□□□□□ -1.75
CD44-232ENST00000531118 HSBP1L1C9JCN9 74 aa4.11□□□□□ -1.75
CD44-232ENST00000531118 SPRR1BP22528 89 aa4.11□□□□□ -1.75
CD44-232ENST00000531118 ATP11AUNQ6ZP68 121 aa4.11□□□□□ -1.75
CD44-232ENST00000531118 Q6ZVH6 145 aa4.11□□□□□ -1.75
CD44-232ENST00000531118 Q75L30 129 aa4.11□□□□□ -1.75
CD44-232ENST00000531118 SMIM29Q86T20 159 aa4.11□□□□□ -1.75
CD44-232ENST00000531118 OR13C6PQ8NH95 151 aa4.11□□□□□ -1.75
CD44-232ENST00000531118 ZNF73O43830 326 aaPredicted RBP4.1□□□□□ -1.75
CD44-232ENST00000531118 SLC25A34Q6PIV7 304 aa4.1□□□□□ -1.75
CD44-232ENST00000531118 KMT2DO14686 5537 aa4.09□□□□□ -1.75
CD44-232ENST00000531118 C5orf52A6NGY3 159 aa4.09□□□□□ -1.75
CD44-232ENST00000531118 IFITM1P13164 125 aa4.09□□□□□ -1.75
CD44-232ENST00000531118 SOSTDC1Q6X4U4 206 aa4.09□□□□□ -1.75
CD44-232ENST00000531118 ATOH7Q8N100 152 aa4.09□□□□□ -1.75
CD44-232ENST00000531118 C20orf166-AS1Q96NR2 134 aa4.09□□□□□ -1.75
CD44-232ENST00000531118 LITAFQ99732 161 aa4.09□□□□□ -1.75
CD44-232ENST00000531118 SPANXDQ9BXN6 97 aa4.09□□□□□ -1.75
CD44-232ENST00000531118 TRBV20-1A0A075B6N2 111 aa4.08□□□□□ -1.76
CD44-232ENST00000531118 Q1RN00 199 aa4.08□□□□□ -1.76
CD44-232ENST00000531118 HIST3H2BBQ8N257 126 aa4.08□□□□□ -1.76
CD44-232ENST00000531118 HIST1H2BLQ99880 126 aa4.08□□□□□ -1.76
CD44-232ENST00000531118 KRTAP2-2Q9BYT5 123 aa4.08□□□□□ -1.76
CD44-232ENST00000531118 TTTY13Q9BZ97 58 aa4.08□□□□□ -1.76
CD44-232ENST00000531118 LAMTOR3Q9UHA4 124 aa4.08□□□□□ -1.76
CD44-232ENST00000531118 PRO1933Q9H354 126 aa4.07□□□□□ -1.76
CD44-232ENST00000531118 DHRS4-AS1Q9P1J3 65 aa4.07□□□□□ -1.76
CD44-232ENST00000531118 FAM236DA0A1B0GTK5 79 aa4.06□□□□□ -1.76
CD44-232ENST00000531118 A6NDN8 102 aa4.06□□□□□ -1.76
CD44-232ENST00000531118 FAM236CP0DP71 79 aa4.06□□□□□ -1.76
CD44-232ENST00000531118 C6orf99Q4VX62 202 aa4.06□□□□□ -1.76
CD44-232ENST00000531118 TRAV13-2A0A0B4J235 113 aa4.05□□□□□ -1.76
CD44-232ENST00000531118 COX7BP24311 80 aa4.05□□□□□ -1.76
CD44-232ENST00000531118 PCP2Q8IVA1 136 aa4.05□□□□□ -1.76
CD44-232ENST00000531118 MUSTN1Q8IVN3 82 aa4.05□□□□□ -1.76
CD44-232ENST00000531118 OBSCN-AS1Q96MR7 158 aa4.05□□□□□ -1.76
CD44-232ENST00000531118 TRBV7-6A0A0J9YX20 115 aa4.04□□□□□ -1.76
CD44-232ENST00000531118 A4D1N5 150 aa4.04□□□□□ -1.76
CD44-232ENST00000531118 A0A0G2JQZ4 141 aa4.03□□□□□ -1.76
CD44-232ENST00000531118 ELOF1P60002 83 aaKnown RBP4.03□□□□□ -1.76
CD44-232ENST00000531118 VAMP3Q15836 100 aa4.03□□□□□ -1.76
CD44-232ENST00000531118 TAL2Q16559 108 aa4.03□□□□□ -1.76
CD44-232ENST00000531118 NHP2Q9NX24 153 aaKnown RBP4.03□□□□□ -1.76
CD44-232ENST00000531118 A0A1B0GWB2 263 aa4.02□□□□□ -1.77
CD44-232ENST00000531118 TEX49A0A1B0GTD5 131 aa4.01□□□□□ -1.77
CD44-232ENST00000531118 TCL1BO95988 128 aa4.01□□□□□ -1.77
CD44-232ENST00000531118 HIST1H4GQ99525 98 aa4.01□□□□□ -1.77
CD44-232ENST00000531118 GPR98Q8WXG9 6306 aa4.01□□□□□ -1.77
CD44-232ENST00000531118 COX8AP10176 69 aa4□□□□□ -1.77
CD44-232ENST00000531118 DEFB105AQ8NG35 78 aa4□□□□□ -1.77
CD44-232ENST00000531118 DLEU1O43261 78 aa3.99□□□□□ -1.77
CD44-232ENST00000531118 KRTAP2-3P0C7H8 128 aa3.99□□□□□ -1.77
CD44-232ENST00000531118 SMIM11BQ8TCY0 68 aa3.99□□□□□ -1.77
CD44-232ENST00000531118 KRTAP2-4Q9BYR9 128 aa3.99□□□□□ -1.77
CD44-232ENST00000531118 SNCGO76070 127 aa3.98□□□□□ -1.77
CD44-232ENST00000531118 KRTAP5-9P26371 169 aa3.98□□□□□ -1.77
CD44-232ENST00000531118 VAMP8Q9BV40 100 aa3.98□□□□□ -1.77
CD44-232ENST00000531118 SPATA45Q537H7 98 aa3.97□□□□□ -1.77
CD44-232ENST00000531118 BVES-AS1Q5T3Y7 98 aa3.97□□□□□ -1.77
CD44-232ENST00000531118 IGFL1Q6UW32 110 aa3.97□□□□□ -1.77
CD44-232ENST00000531118 Q96NJ1 140 aa3.97□□□□□ -1.77
CD44-232ENST00000531118 IGLV5-48A0A075B6I7 105 aa3.96□□□□□ -1.78
CD44-232ENST00000531118 hADV29S1A0JD25 119 aa3.96□□□□□ -1.78
CD44-232ENST00000531118 A8MUU9 505 aa3.96□□□□□ -1.78
CD44-232ENST00000531118 F8WEM9 126 aa3.96□□□□□ -1.78
CD44-232ENST00000531118 HRES1P13985 223 aa3.96□□□□□ -1.78
CD44-232ENST00000531118 UBE2V1Q13404 147 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms