RNA–Protein interactions for RNA: ENST00000531043.1

HIF3A-214, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-214ENST00000531043 HIST2H2BEQ16778 126 aa6.77□□□□□ -1.33
HIF3A-214ENST00000531043 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.77□□□□□ -1.33
HIF3A-214ENST00000531043 HIST1H2BHQ93079 126 aa6.77□□□□□ -1.33
HIF3A-214ENST00000531043 HIST1H2BNQ99877 126 aa6.77□□□□□ -1.33
HIF3A-214ENST00000531043 HIST1H2BMQ99879 126 aa6.77□□□□□ -1.33
HIF3A-214ENST00000531043 F8WEM9 126 aa6.76□□□□□ -1.33
HIF3A-214ENST00000531043 IFITM1P13164 125 aa6.76□□□□□ -1.33
HIF3A-214ENST00000531043 LCE2BO14633 110 aa6.75□□□□□ -1.33
HIF3A-214ENST00000531043 MT2AP02795 61 aa6.75□□□□□ -1.33
HIF3A-214ENST00000531043 Q96NJ1 140 aa6.75□□□□□ -1.33
HIF3A-214ENST00000531043 NHP2Q9NX24 153 aaKnown RBP6.75□□□□□ -1.33
HIF3A-214ENST00000531043 LINC00575Q6W349 94 aa6.74□□□□□ -1.33
HIF3A-214ENST00000531043 Q6ZQY7 126 aa6.74□□□□□ -1.33
HIF3A-214ENST00000531043 KRTAP19-1Q8IUB9 90 aa6.74□□□□□ -1.33
HIF3A-214ENST00000531043 CLEC2BQ92478 149 aa6.74□□□□□ -1.33
HIF3A-214ENST00000531043 TRAV13-2A0A0B4J235 113 aa6.73□□□□□ -1.33
HIF3A-214ENST00000531043 C20orf202A1L168 122 aa6.73□□□□□ -1.33
HIF3A-214ENST00000531043 Q6JHZ5 121 aa6.73□□□□□ -1.33
HIF3A-214ENST00000531043 SLC7A5P1Q8MH63 180 aa6.73□□□□□ -1.33
HIF3A-214ENST00000531043 ATOH7Q8N100 152 aa6.73□□□□□ -1.33
HIF3A-214ENST00000531043 MT1FP04733 61 aa6.72□□□□□ -1.33
HIF3A-214ENST00000531043 KRTDAPP60985 99 aa6.72□□□□□ -1.33
HIF3A-214ENST00000531043 OCIAD2Q56VL3 154 aa6.72□□□□□ -1.33
HIF3A-214ENST00000531043 COPS9Q8WXC6 57 aa6.72□□□□□ -1.33
HIF3A-214ENST00000531043 Q6ZVH6 145 aa6.71□□□□□ -1.34
HIF3A-214ENST00000531043 C20orf166-AS1Q96NR2 134 aa6.71□□□□□ -1.34
HIF3A-214ENST00000531043 H3BUT2 72 aa6.7□□□□□ -1.34
HIF3A-214ENST00000531043 hADV29S1A0JD25 119 aa6.69□□□□□ -1.34
HIF3A-214ENST00000531043 A8MUU9 505 aa6.69□□□□□ -1.34
HIF3A-214ENST00000531043 LST1O00453 97 aa6.68□□□□□ -1.34
HIF3A-214ENST00000531043 KRTAP9-3Q9BYQ3 159 aa6.68□□□□□ -1.34
HIF3A-214ENST00000531043 KRTAP16-1A8MUX0 517 aa6.67□□□□□ -1.34
HIF3A-214ENST00000531043 VAMP3Q15836 100 aa6.67□□□□□ -1.34
HIF3A-214ENST00000531043 TRBV20-1A0A075B6N2 111 aa6.65□□□□□ -1.34
HIF3A-214ENST00000531043 SYNE2Q8WXH0 6885 aaKnown RBP6.63□□□□□ -1.35
HIF3A-214ENST00000531043 DSCR10P59022 87 aa6.63□□□□□ -1.35
HIF3A-214ENST00000531043 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.63□□□□□ -1.35
HIF3A-214ENST00000531043 KRTAP10-10P60014 251 aa6.62□□□□□ -1.35
HIF3A-214ENST00000531043 COA6Q5JTJ3 125 aaKnown RBP6.62□□□□□ -1.35
HIF3A-214ENST00000531043 SNHG12Q9BXW3 62 aa6.62□□□□□ -1.35
HIF3A-214ENST00000531043 MACF1Q9UPN3 7388 aaKnown RBP6.61□□□□□ -1.35
HIF3A-214ENST00000531043 C12orf57Q99622 126 aa6.6□□□□□ -1.35
HIF3A-214ENST00000531043 FAM236DA0A1B0GTK5 79 aa6.59□□□□□ -1.35
HIF3A-214ENST00000531043 FAM236CP0DP71 79 aa6.59□□□□□ -1.35
HIF3A-214ENST00000531043 HRES1P13985 223 aa6.58□□□□□ -1.36
HIF3A-214ENST00000531043 MPLKIPQ8TAP9 179 aa6.58□□□□□ -1.36
HIF3A-214ENST00000531043 PPDPFLQ8WWR9 84 aa6.58□□□□□ -1.36
HIF3A-214ENST00000531043 A0A087WSZ3 146 aa6.57□□□□□ -1.36
HIF3A-214ENST00000531043 SS18L2Q9UHA2 77 aa6.56□□□□□ -1.36
HIF3A-214ENST00000531043 NOTCH2NLQ7Z3S9 236 aa6.55□□□□□ -1.36
HIF3A-214ENST00000531043 TEN1Q86WV5 123 aa6.55□□□□□ -1.36
HIF3A-214ENST00000531043 SCGB1D1O95968 90 aa6.54□□□□□ -1.36
HIF3A-214ENST00000531043 BVES-AS1Q5T3Y7 98 aa6.53□□□□□ -1.36
HIF3A-214ENST00000531043 FAM218AQ96MZ4 157 aa6.53□□□□□ -1.36
HIF3A-214ENST00000531043 NDUFV3P56181 108 aaKnown RBP6.52□□□□□ -1.37
HIF3A-214ENST00000531043 SIGMAR1Q99720 223 aa6.52□□□□□ -1.37
HIF3A-214ENST00000531043 SNRPEP62304 92 aaKnown RBP6.51□□□□□ -1.37
HIF3A-214ENST00000531043 A0A1W2PNM2 257 aa6.5□□□□□ -1.37
HIF3A-214ENST00000531043 LINC00313P59037 77 aa6.5□□□□□ -1.37
HIF3A-214ENST00000531043 KRTAP19-6Q3LI70 58 aa6.5□□□□□ -1.37
HIF3A-214ENST00000531043 RBM12B-AS1Q9P1G2 102 aa6.5□□□□□ -1.37
HIF3A-214ENST00000531043 H3BMG7 143 aa6.47□□□□□ -1.37
HIF3A-214ENST00000531043 HIST1H4GQ99525 98 aa6.47□□□□□ -1.37
HIF3A-214ENST00000531043 IGKV4-1P06312 121 aa6.46□□□□□ -1.38
HIF3A-214ENST00000531043 HSBP1L1C9JCN9 74 aa6.45□□□□□ -1.38
HIF3A-214ENST00000531043 DEFB116Q30KQ4 102 aa6.45□□□□□ -1.38
HIF3A-214ENST00000531043 HIST3H2BBQ8N257 126 aa6.44□□□□□ -1.38
HIF3A-214ENST00000531043 HIST1H2BLQ99880 126 aa6.44□□□□□ -1.38
HIF3A-214ENST00000531043 FABP2P12104 132 aa6.43□□□□□ -1.38
HIF3A-214ENST00000531043 A0A1B0GV72 72 aa6.41□□□□□ -1.38
HIF3A-214ENST00000531043 H0YGX0 51 aa6.41□□□□□ -1.38
HIF3A-214ENST00000531043 IGHV6-1A0A0B4J1U7 121 aa6.4□□□□□ -1.38
HIF3A-214ENST00000531043 RAB37Q96AX2 223 aa6.4□□□□□ -1.38
HIF3A-214ENST00000531043 LINC00472Q9H8W2 130 aa6.4□□□□□ -1.38
HIF3A-214ENST00000531043 LINC00846Q9NV44 126 aa6.4□□□□□ -1.38
HIF3A-214ENST00000531043 COX8AP10176 69 aa6.39□□□□□ -1.39
HIF3A-214ENST00000531043 KRTAP6-3Q3LI67 103 aa6.39□□□□□ -1.39
HIF3A-214ENST00000531043 A0A0B4J2C4 111 aa6.37□□□□□ -1.39
HIF3A-214ENST00000531043 TRBV7-4A0A0J9YYF1 115 aa6.37□□□□□ -1.39
HIF3A-214ENST00000531043 SNCGO76070 127 aa6.37□□□□□ -1.39
HIF3A-214ENST00000531043 ANKRD29Q8N6D5 301 aa6.37□□□□□ -1.39
HIF3A-214ENST00000531043 S100A2P29034 98 aa6.36□□□□□ -1.39
HIF3A-214ENST00000531043 Q8N9P0 234 aaPredicted RBP6.36□□□□□ -1.39
HIF3A-214ENST00000531043 SPINK7P58062 85 aa6.35□□□□□ -1.39
HIF3A-214ENST00000531043 A0A1B0GX51 115 aa6.34□□□□□ -1.39
HIF3A-214ENST00000531043 DLEU1O43261 78 aa6.34□□□□□ -1.39
HIF3A-214ENST00000531043 ZCCHC13Q8WW36 166 aaKnown RBP6.34□□□□□ -1.39
HIF3A-214ENST00000531043 C14orf144Q96I85 54 aa6.34□□□□□ -1.39
HIF3A-214ENST00000531043 TRIAP1O43715 76 aa6.33□□□□□ -1.4
HIF3A-214ENST00000531043 C2orf91Q6ZV80 131 aa6.32□□□□□ -1.4
HIF3A-214ENST00000531043 MTURNQ8N3F0 131 aa6.32□□□□□ -1.4
HIF3A-214ENST00000531043 A0A1B0GVX0 72 aa6.31□□□□□ -1.4
HIF3A-214ENST00000531043 A8MWP4 228 aa6.31□□□□□ -1.4
HIF3A-214ENST00000531043 CCKP06307 115 aa6.31□□□□□ -1.4
HIF3A-214ENST00000531043 SMCPP49901 116 aaPredicted RBP6.31□□□□□ -1.4
HIF3A-214ENST00000531043 HIGD1BQ9P298 99 aa6.3□□□□□ -1.4
HIF3A-214ENST00000531043 PRO1854Q9UHT4 67 aa6.3□□□□□ -1.4
HIF3A-214ENST00000531043 C8orf87E5RJ46 101 aa6.29□□□□□ -1.4
HIF3A-214ENST00000531043 GHRHP01286 108 aa6.29□□□□□ -1.4
HIF3A-214ENST00000531043 TRACP01848 142 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms