RNA–Protein interactions for RNA: ENST00000530404.5

TSPAN4-219, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-219ENST00000530404 COA6Q5JTJ3 125 aaKnown RBP10.86□□□□□ -0.67
TSPAN4-219ENST00000530404 Q6Q795 121 aa10.84□□□□□ -0.67
TSPAN4-219ENST00000530404 IGFL1Q6UW32 110 aa10.84□□□□□ -0.67
TSPAN4-219ENST00000530404 LINC00575Q6W349 94 aa10.84□□□□□ -0.67
TSPAN4-219ENST00000530404 Q6ZQY7 126 aa10.84□□□□□ -0.67
TSPAN4-219ENST00000530404 TRBV7-7A0A0K0K1E9 115 aa10.82□□□□□ -0.68
TSPAN4-219ENST00000530404 OBSCN-AS1Q96MR7 158 aa10.82□□□□□ -0.68
TSPAN4-219ENST00000530404 hADV29S1A0JD25 119 aa10.81□□□□□ -0.68
TSPAN4-219ENST00000530404 VAMP3Q15836 100 aa10.81□□□□□ -0.68
TSPAN4-219ENST00000530404 CLEC2BQ92478 149 aa10.81□□□□□ -0.68
TSPAN4-219ENST00000530404 Q6JHZ5 121 aa10.79□□□□□ -0.68
TSPAN4-219ENST00000530404 ATP11AUNQ6ZP68 121 aa10.77□□□□□ -0.69
TSPAN4-219ENST00000530404 OCIAD2Q56VL3 154 aa10.76□□□□□ -0.69
TSPAN4-219ENST00000530404 Q75L30 129 aa10.76□□□□□ -0.69
TSPAN4-219ENST00000530404 C12orf57Q99622 126 aa10.72□□□□□ -0.69
TSPAN4-219ENST00000530404 H3BUT2 72 aa10.71□□□□□ -0.69
TSPAN4-219ENST00000530404 SNRPEP62304 92 aaKnown RBP10.71□□□□□ -0.69
TSPAN4-219ENST00000530404 Q96NJ1 140 aa10.7□□□□□ -0.7
TSPAN4-219ENST00000530404 LST1O00453 97 aa10.69□□□□□ -0.7
TSPAN4-219ENST00000530404 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.69□□□□□ -0.7
TSPAN4-219ENST00000530404 SNHG12Q9BXW3 62 aa10.68□□□□□ -0.7
TSPAN4-219ENST00000530404 HSBP1L1C9JCN9 74 aa10.64□□□□□ -0.71
TSPAN4-219ENST00000530404 USH2AO75445 5202 aa10.64□□□□□ -0.71
TSPAN4-219ENST00000530404 BVES-AS1Q5T3Y7 98 aa10.63□□□□□ -0.71
TSPAN4-219ENST00000530404 PPDPFLQ8WWR9 84 aa10.63□□□□□ -0.71
TSPAN4-219ENST00000530404 SSPOA2VEC9 5147 aa10.62□□□□□ -0.71
TSPAN4-219ENST00000530404 HIST3H2BBQ8N257 126 aa10.62□□□□□ -0.71
TSPAN4-219ENST00000530404 HIST1H2BLQ99880 126 aa10.61□□□□□ -0.71
TSPAN4-219ENST00000530404 C20orf166-AS1Q96NR2 134 aa10.6□□□□□ -0.71
TSPAN4-219ENST00000530404 KRTAP9-8Q9BYQ0 159 aa10.6□□□□□ -0.71
TSPAN4-219ENST00000530404 HIST1H4GQ99525 98 aa10.59□□□□□ -0.71
TSPAN4-219ENST00000530404 SCGB1D1O95968 90 aa10.58□□□□□ -0.72
TSPAN4-219ENST00000530404 S100A2P29034 98 aa10.58□□□□□ -0.72
TSPAN4-219ENST00000530404 A8MUU9 505 aa10.57□□□□□ -0.72
TSPAN4-219ENST00000530404 SS18L2Q9UHA2 77 aa10.57□□□□□ -0.72
TSPAN4-219ENST00000530404 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.54□□□□□ -0.72
TSPAN4-219ENST00000530404 DSCR10P59022 87 aa10.54□□□□□ -0.72
TSPAN4-219ENST00000530404 A0A087WSZ3 146 aa10.53□□□□□ -0.72
TSPAN4-219ENST00000530404 CFC1P0CG37 223 aa10.53□□□□□ -0.72
TSPAN4-219ENST00000530404 TEN1Q86WV5 123 aa10.53□□□□□ -0.72
TSPAN4-219ENST00000530404 FAM218AQ96MZ4 157 aa10.53□□□□□ -0.72
TSPAN4-219ENST00000530404 TRBV20-1A0A075B6N2 111 aa10.52□□□□□ -0.73
TSPAN4-219ENST00000530404 NDUFV3P56181 108 aaKnown RBP10.52□□□□□ -0.73
TSPAN4-219ENST00000530404 KRTAP9-7A8MTY7 169 aa10.5□□□□□ -0.73
TSPAN4-219ENST00000530404 COX8AP10176 69 aa10.49□□□□□ -0.73
TSPAN4-219ENST00000530404 RAB37Q96AX2 223 aa10.48□□□□□ -0.73
TSPAN4-219ENST00000530404 KRTAP16-1A8MUX0 517 aa10.46□□□□□ -0.73
TSPAN4-219ENST00000530404 SIGMAR1Q99720 223 aa10.46□□□□□ -0.73
TSPAN4-219ENST00000530404 H0YGX0 51 aa10.44□□□□□ -0.74
TSPAN4-219ENST00000530404 H3BMG7 143 aa10.44□□□□□ -0.74
TSPAN4-219ENST00000530404 SNCGO76070 127 aa10.44□□□□□ -0.74
TSPAN4-219ENST00000530404 MT2AP02795 61 aa10.43□□□□□ -0.74
TSPAN4-219ENST00000530404 FAM236DA0A1B0GTK5 79 aa10.42□□□□□ -0.74
TSPAN4-219ENST00000530404 A0A1W2PNM2 257 aa10.42□□□□□ -0.74
TSPAN4-219ENST00000530404 S100A6P06703 90 aa10.42□□□□□ -0.74
TSPAN4-219ENST00000530404 FAM236CP0DP71 79 aa10.42□□□□□ -0.74
TSPAN4-219ENST00000530404 FABP2P12104 132 aa10.42□□□□□ -0.74
TSPAN4-219ENST00000530404 C14orf144Q96I85 54 aa10.41□□□□□ -0.74
TSPAN4-219ENST00000530404 A0A0B4J2C4 111 aa10.4□□□□□ -0.74
TSPAN4-219ENST00000530404 DLEU1O43261 78 aa10.4□□□□□ -0.74
TSPAN4-219ENST00000530404 FCGBPQ9Y6R7 5405 aaPredicted RBP10.38□□□□□ -0.75
TSPAN4-219ENST00000530404 LINC00313P59037 77 aa10.38□□□□□ -0.75
TSPAN4-219ENST00000530404 A0A1B0GV72 72 aa10.37□□□□□ -0.75
TSPAN4-219ENST00000530404 MT1FP04733 61 aa10.36□□□□□ -0.75
TSPAN4-219ENST00000530404 IGKV4-1P06312 121 aa10.36□□□□□ -0.75
TSPAN4-219ENST00000530404 NOTCH2NLQ7Z3S9 236 aa10.36□□□□□ -0.75
TSPAN4-219ENST00000530404 HRES1P13985 223 aa10.34□□□□□ -0.75
TSPAN4-219ENST00000530404 C2orf91Q6ZV80 131 aa10.34□□□□□ -0.75
TSPAN4-219ENST00000530404 HIGD1BQ9P298 99 aa10.34□□□□□ -0.75
TSPAN4-219ENST00000530404 PAM16Q9Y3D7 125 aa10.34□□□□□ -0.75
TSPAN4-219ENST00000530404 LCE2BO14633 110 aa10.33□□□□□ -0.76
TSPAN4-219ENST00000530404 DEFB116Q30KQ4 102 aa10.33□□□□□ -0.76
TSPAN4-219ENST00000530404 A0A1B0GX51 115 aa10.32□□□□□ -0.76
TSPAN4-219ENST00000530404 SPATA45Q537H7 98 aa10.32□□□□□ -0.76
TSPAN4-219ENST00000530404 MPLKIPQ8TAP9 179 aa10.31□□□□□ -0.76
TSPAN4-219ENST00000530404 TRIAP1O43715 76 aa10.3□□□□□ -0.76
TSPAN4-219ENST00000530404 KRTAP19-1Q8IUB9 90 aa10.3□□□□□ -0.76
TSPAN4-219ENST00000530404 CEND1Q8N111 149 aa10.3□□□□□ -0.76
TSPAN4-219ENST00000530404 RBM12B-AS1Q9P1G2 102 aa10.3□□□□□ -0.76
TSPAN4-219ENST00000530404 PRO1854Q9UHT4 67 aa10.3□□□□□ -0.76
TSPAN4-219ENST00000530404 GHRHP01286 108 aa10.29□□□□□ -0.76
TSPAN4-219ENST00000530404 ANKRD29Q8N6D5 301 aa10.29□□□□□ -0.76
TSPAN4-219ENST00000530404 KRTAP10-10P60014 251 aa10.28□□□□□ -0.76
TSPAN4-219ENST00000530404 FXYD2P54710 66 aa10.27□□□□□ -0.77
TSPAN4-219ENST00000530404 KRTAP9-3Q9BYQ3 159 aa10.27□□□□□ -0.77
TSPAN4-219ENST00000530404 TRBV7-4A0A0J9YYF1 115 aa10.26□□□□□ -0.77
TSPAN4-219ENST00000530404 IGHV6-1A0A0B4J1U7 121 aa10.25□□□□□ -0.77
TSPAN4-219ENST00000530404 LINC00472Q9H8W2 130 aa10.24□□□□□ -0.77
TSPAN4-219ENST00000530404 VAMP8Q9BV40 100 aa10.23□□□□□ -0.77
TSPAN4-219ENST00000530404 ORMDL1Q9P0S3 153 aa10.23□□□□□ -0.77
TSPAN4-219ENST00000530404 TMEM238LA0A1B0GVL6 79 aa10.22□□□□□ -0.77
TSPAN4-219ENST00000530404 A6NJY4 79 aa10.22□□□□□ -0.77
TSPAN4-219ENST00000530404 DNAL4O96015 105 aa10.22□□□□□ -0.77
TSPAN4-219ENST00000530404 CCKP06307 115 aa10.2□□□□□ -0.78
TSPAN4-219ENST00000530404 TRACP01848 142 aa10.19□□□□□ -0.78
TSPAN4-219ENST00000530404 S100A1P23297 94 aa10.18□□□□□ -0.78
TSPAN4-219ENST00000530404 K7ERJ3 54 aa10.16□□□□□ -0.78
TSPAN4-219ENST00000530404 PSMB2P49721 201 aa10.16□□□□□ -0.78
TSPAN4-219ENST00000530404 TMEM256-PLSCR3K7ERE1 68 aa10.14□□□□□ -0.79
TSPAN4-219ENST00000530404 VPS25Q9BRG1 176 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms