RNA–Protein interactions for RNA: ENST00000530199.5

SVIP-204, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-204ENST00000530199 PP632Q6XCG6 107 aa3.06□□□□□ -1.92
SVIP-204ENST00000530199 SPRR1AP35321 89 aa3.05□□□□□ -1.92
SVIP-204ENST00000530199 RPL39P62891 51 aaKnown RBP3.05□□□□□ -1.92
SVIP-204ENST00000530199 PPP1R1CQ8WVI7 109 aa3.05□□□□□ -1.92
SVIP-204ENST00000530199 AHNAK2Q8IVF2 5795 aa3.04□□□□□ -1.92
SVIP-204ENST00000530199 LINC00862A6NCI5 91 aa3.04□□□□□ -1.92
SVIP-204ENST00000530199 A8MUN3 132 aa3.04□□□□□ -1.92
SVIP-204ENST00000530199 IGKV4-1P06312 121 aa3.04□□□□□ -1.92
SVIP-204ENST00000530199 ZNF22P17026 224 aaPredicted RBP3.04□□□□□ -1.92
SVIP-204ENST00000530199 RHEBQ15382 184 aa3.04□□□□□ -1.92
SVIP-204ENST00000530199 KRTAP5-10Q6L8G5 202 aa3.04□□□□□ -1.92
SVIP-204ENST00000530199 KRTAP5-4Q6L8H1 288 aa3.04□□□□□ -1.92
SVIP-204ENST00000530199 MED9Q9NWA0 146 aa3.04□□□□□ -1.92
SVIP-204ENST00000530199 BORCS7-ASMTA0A0B4J1R7 106 aa3.03□□□□□ -1.92
SVIP-204ENST00000530199 LINC00587B1AMM8 73 aa3.03□□□□□ -1.92
SVIP-204ENST00000530199 MPC2O95563 127 aa3.03□□□□□ -1.92
SVIP-204ENST00000530199 PPP1R17O96001 155 aa3.03□□□□□ -1.92
SVIP-204ENST00000530199 RPL35P42766 123 aaKnown RBP3.03□□□□□ -1.92
SVIP-204ENST00000530199 RPS28P62857 69 aaKnown RBP3.03□□□□□ -1.92
SVIP-204ENST00000530199 MBD3L1Q8WWY6 194 aa3.03□□□□□ -1.92
SVIP-204ENST00000530199 CYSLTR1Q9Y271 337 aa3.03□□□□□ -1.92
SVIP-204ENST00000530199 A0A0G2JQZ4 141 aa3.02□□□□□ -1.93
SVIP-204ENST00000530199 A0A1B0GX51 115 aa3.02□□□□□ -1.93
SVIP-204ENST00000530199 J3KT08 172 aa3.02□□□□□ -1.93
SVIP-204ENST00000530199 KRTAP5-7Q6L8G8 165 aa3.02□□□□□ -1.93
SVIP-204ENST00000530199 Q8NDZ9 215 aa3.02□□□□□ -1.93
SVIP-204ENST00000530199 TRBV20OR9-2A0A075B6H5 130 aa3.01□□□□□ -1.93
SVIP-204ENST00000530199 ERC2-IT1O76042 136 aa3.01□□□□□ -1.93
SVIP-204ENST00000530199 MT1BP07438 61 aa3.01□□□□□ -1.93
SVIP-204ENST00000530199 HRCT1Q6UXD1 115 aa3.01□□□□□ -1.93
SVIP-204ENST00000530199 TMEM191AQ9H0A3 160 aa3.01□□□□□ -1.93
SVIP-204ENST00000530199 TRAV9-1A0A075B6T8 112 aa3□□□□□ -1.93
SVIP-204ENST00000530199 A0A1B0GV90 55 aa3□□□□□ -1.93
SVIP-204ENST00000530199 A0A1W2PNM2 257 aa3□□□□□ -1.93
SVIP-204ENST00000530199 IFI27P40305 119 aaPredicted RBP3□□□□□ -1.93
SVIP-204ENST00000530199 TMEM141Q96I45 108 aa3□□□□□ -1.93
SVIP-204ENST00000530199 C2orf88Q9BSF0 95 aa3□□□□□ -1.93
SVIP-204ENST00000530199 KRTAP4-4Q9BYR3 166 aa3□□□□□ -1.93
SVIP-204ENST00000530199 KCNQ1DNQ9H478 68 aa3□□□□□ -1.93
SVIP-204ENST00000530199 HMCN1Q96RW7 5635 aa3□□□□□ -1.93
SVIP-204ENST00000530199 ETDCA0A1B0GVM5 59 aa2.99□□□□□ -1.93
SVIP-204ENST00000530199 TOMM6Q96B49 74 aa2.99□□□□□ -1.93
SVIP-204ENST00000530199 VPS25Q9BRG1 176 aa2.99□□□□□ -1.93
SVIP-204ENST00000530199 LAMTOR3Q9UHA4 124 aa2.99□□□□□ -1.93
SVIP-204ENST00000530199 HSPB8Q9UJY1 196 aa2.99□□□□□ -1.93
SVIP-204ENST00000530199 LOC107984156A0A0G2JMH3 177 aa2.98□□□□□ -1.93
SVIP-204ENST00000530199 A0A1B0GW54 56 aa2.98□□□□□ -1.93
SVIP-204ENST00000530199 F8W036 122 aa2.98□□□□□ -1.93
SVIP-204ENST00000530199 PLA2G10O15496 165 aa2.98□□□□□ -1.93
SVIP-204ENST00000530199 SRP19P09132 144 aaKnown RBP2.98□□□□□ -1.93
SVIP-204ENST00000530199 MRPL51Q4U2R6 128 aaKnown RBP2.98□□□□□ -1.93
SVIP-204ENST00000530199 ARL17AQ8IVW1 177 aa2.98□□□□□ -1.93
SVIP-204ENST00000530199 C20orf78Q9BR46 151 aa2.98□□□□□ -1.93
SVIP-204ENST00000530199 IMUPQ9GZP8 106 aa2.98□□□□□ -1.93
SVIP-204ENST00000530199 CDKN2A-AS1Q9UH64 79 aa2.98□□□□□ -1.93
SVIP-204ENST00000530199 LYRM1O43325 122 aa2.97□□□□□ -1.93
SVIP-204ENST00000530199 CCL20P78556 96 aa2.97□□□□□ -1.93
SVIP-204ENST00000530199 LYRM7Q5U5X0 104 aa2.97□□□□□ -1.93
SVIP-204ENST00000530199 ALKAL2Q6UX46 152 aa2.97□□□□□ -1.93
SVIP-204ENST00000530199 KTN1-AS1Q86SY8 53 aa2.97□□□□□ -1.93
SVIP-204ENST00000530199 COX7B2Q8TF08 81 aa2.97□□□□□ -1.93
SVIP-204ENST00000530199 AMELXQ99217 191 aa2.97□□□□□ -1.93
SVIP-204ENST00000530199 Q9BRP9 147 aa2.97□□□□□ -1.93
SVIP-204ENST00000530199 DLEU1O43261 78 aa2.96□□□□□ -1.94
SVIP-204ENST00000530199 IL7P13232 177 aa2.96□□□□□ -1.94
SVIP-204ENST00000530199 GNG4P50150 75 aa2.96□□□□□ -1.94
SVIP-204ENST00000530199 SEC11AP67812 179 aa2.96□□□□□ -1.94
SVIP-204ENST00000530199 LAMTOR2Q9Y2Q5 125 aa2.96□□□□□ -1.94
SVIP-204ENST00000530199 COX17Q14061 63 aa2.95□□□□□ -1.94
SVIP-204ENST00000530199 KRTAP5-5Q701N2 237 aaPredicted RBP2.95□□□□□ -1.94
SVIP-204ENST00000530199 H7C2G1 150 aa2.94□□□□□ -1.94
SVIP-204ENST00000530199 ZNF73O43830 326 aaPredicted RBP2.94□□□□□ -1.94
SVIP-204ENST00000530199 SPRR1BP22528 89 aa2.94□□□□□ -1.94
SVIP-204ENST00000530199 HIST1H2BOP23527 126 aa2.94□□□□□ -1.94
SVIP-204ENST00000530199 S100PP25815 95 aa2.94□□□□□ -1.94
SVIP-204ENST00000530199 HIST1H2BBP33778 126 aa2.94□□□□□ -1.94
SVIP-204ENST00000530199 HIST1H2BDP58876 126 aa2.94□□□□□ -1.94
SVIP-204ENST00000530199 HIST1H2BCP62807 126 aa2.94□□□□□ -1.94
SVIP-204ENST00000530199 HIST2H2BEQ16778 126 aa2.94□□□□□ -1.94
SVIP-204ENST00000530199 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.94□□□□□ -1.94
SVIP-204ENST00000530199 Q5VV11 94 aa2.94□□□□□ -1.94
SVIP-204ENST00000530199 LCA10Q71F78 164 aa2.94□□□□□ -1.94
SVIP-204ENST00000530199 HIST1H2BHQ93079 126 aa2.94□□□□□ -1.94
SVIP-204ENST00000530199 OBSCN-AS1Q96MR7 158 aa2.94□□□□□ -1.94
SVIP-204ENST00000530199 HIST1H2BNQ99877 126 aa2.94□□□□□ -1.94
SVIP-204ENST00000530199 HIST1H2BMQ99879 126 aa2.94□□□□□ -1.94
SVIP-204ENST00000530199 SMIM2Q9BVW6 85 aa2.94□□□□□ -1.94
SVIP-204ENST00000530199 KRTAP19-8Q3LI54 63 aa2.93□□□□□ -1.94
SVIP-204ENST00000530199 RPL7L1Q6DKI1 246 aaKnown RBP2.93□□□□□ -1.94
SVIP-204ENST00000530199 Q6ZRX8 168 aa2.93□□□□□ -1.94
SVIP-204ENST00000530199 KCNRGQ8N5I3 272 aa2.93□□□□□ -1.94
SVIP-204ENST00000530199 A0A1B0GUT8 65 aa2.92□□□□□ -1.94
SVIP-204ENST00000530199 C9JAW5 83 aa2.92□□□□□ -1.94
SVIP-204ENST00000530199 TSPEAR-AS2P59090 65 aa2.92□□□□□ -1.94
SVIP-204ENST00000530199 KRTAP8-1Q8IUC2 63 aa2.92□□□□□ -1.94
SVIP-204ENST00000530199 PRR15Q8IV56 129 aa2.92□□□□□ -1.94
SVIP-204ENST00000530199 PRO1933Q9H354 126 aa2.92□□□□□ -1.94
SVIP-204ENST00000530199 ERG28Q9UKR5 140 aa2.92□□□□□ -1.94
SVIP-204ENST00000530199 TRGC2P03986 189 aa2.91□□□□□ -1.94
SVIP-204ENST00000530199 TCTE3Q8IZS6 198 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms