RNA–Protein interactions for RNA: ENST00000529521.1

FDFT1-216, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 2

Gene FDFT1, Length 418 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-216ENST00000529521 G3V318 75 aa1.68□□□□□ -2.14
FDFT1-216ENST00000529521 GAS8-AS1O95177 125 aa1.68□□□□□ -2.14
FDFT1-216ENST00000529521 COX17Q14061 63 aa1.68□□□□□ -2.14
FDFT1-216ENST00000529521 RPL39LQ96EH5 51 aaKnown RBP1.68□□□□□ -2.14
FDFT1-216ENST00000529521 SETD2Q9BYW2 2564 aaPredicted RBP1.68□□□□□ -2.14
FDFT1-216ENST00000529521 SPTBN1Q01082 2364 aaKnown RBP1.67□□□□□ -2.14
FDFT1-216ENST00000529521 ACACAQ13085 2346 aa1.67□□□□□ -2.14
FDFT1-216ENST00000529521 TRGV2A0A075B6R0 118 aa1.67□□□□□ -2.14
FDFT1-216ENST00000529521 LYNX1G3V0Z9 82 aa1.67□□□□□ -2.14
FDFT1-216ENST00000529521 LYNX1P0DP58 116 aa1.67□□□□□ -2.14
FDFT1-216ENST00000529521 LINC00308Q8TCZ7 52 aa1.67□□□□□ -2.14
FDFT1-216ENST00000529521 FN1P02751 2386 aaKnown RBP1.67□□□□□ -2.14
FDFT1-216ENST00000529521 LOC400499M0QZD8 3231 aa1.67□□□□□ -2.14
FDFT1-216ENST00000529521 NBEAQ8NFP9 2946 aa1.67□□□□□ -2.14
FDFT1-216ENST00000529521 PRRC2AP48634 2157 aaKnown RBP1.66□□□□□ -2.14
FDFT1-216ENST00000529521 COL6A6A6NMZ7 2263 aa1.66□□□□□ -2.14
FDFT1-216ENST00000529521 TRBV6-4A0A1B0GX49 114 aa1.66□□□□□ -2.14
FDFT1-216ENST00000529521 PRB2P02812 416 aaPredicted RBP1.66□□□□□ -2.14
FDFT1-216ENST00000529521 KRTAP10-12P60413 245 aa1.66□□□□□ -2.14
FDFT1-216ENST00000529521 RPL39P62891 51 aaKnown RBP1.66□□□□□ -2.14
FDFT1-216ENST00000529521 DEFB116Q30KQ4 102 aa1.66□□□□□ -2.14
FDFT1-216ENST00000529521 SPINT4Q6UDR6 99 aa1.66□□□□□ -2.14
FDFT1-216ENST00000529521 Q6ZTI0 123 aa1.66□□□□□ -2.14
FDFT1-216ENST00000529521 ST20-AS1Q8NBB2 130 aa1.66□□□□□ -2.14
FDFT1-216ENST00000529521 LINC00472Q9H8W2 130 aa1.66□□□□□ -2.14
FDFT1-216ENST00000529521 PKDREJQ9NTG1 2253 aa1.66□□□□□ -2.14
FDFT1-216ENST00000529521 LAMA1P25391 3075 aa1.66□□□□□ -2.14
FDFT1-216ENST00000529521 APC2O95996 2303 aa1.66□□□□□ -2.14
FDFT1-216ENST00000529521 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.65□□□□□ -2.15
FDFT1-216ENST00000529521 NBDYA0A0U1RRE5 68 aa1.65□□□□□ -2.15
FDFT1-216ENST00000529521 H3BUX3 64 aa1.65□□□□□ -2.15
FDFT1-216ENST00000529521 COX7BP24311 80 aa1.65□□□□□ -2.15
FDFT1-216ENST00000529521 PRR9Q5T870 116 aa1.65□□□□□ -2.15
FDFT1-216ENST00000529521 LINC00612Q8N6U2 182 aa1.65□□□□□ -2.15
FDFT1-216ENST00000529521 CDKN2A-AS1Q9UH64 79 aa1.65□□□□□ -2.15
FDFT1-216ENST00000529521 RELNP78509 3460 aa1.64□□□□□ -2.15
FDFT1-216ENST00000529521 C4orf3Q8WVX3 66 aa1.64□□□□□ -2.15
FDFT1-216ENST00000529521 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.64□□□□□ -2.158e-20■■■■□ 21.3
FDFT1-216ENST00000529521 NBEAL1Q6ZS30 2694 aa1.63□□□□□ -2.15
FDFT1-216ENST00000529521 FRYLO94915 3013 aa1.63□□□□□ -2.15
FDFT1-216ENST00000529521 FREM2Q5SZK8 3169 aa1.63□□□□□ -2.15
FDFT1-216ENST00000529521 TRGV1A0A0A0MS02 117 aa1.63□□□□□ -2.15
FDFT1-216ENST00000529521 A0A1B0GU69 56 aa1.63□□□□□ -2.15
FDFT1-216ENST00000529521 LINC00158P58513 81 aa1.63□□□□□ -2.15
FDFT1-216ENST00000529521 DEFB131AP59861 70 aa1.63□□□□□ -2.15
FDFT1-216ENST00000529521 RPL37AP61513 92 aaKnown RBP1.63□□□□□ -2.15
FDFT1-216ENST00000529521 SPINK13Q1W4C9 94 aa1.63□□□□□ -2.15
FDFT1-216ENST00000529521 Q8IZM0 81 aa1.63□□□□□ -2.15
FDFT1-216ENST00000529521 SMIM11BQ8TCY0 68 aa1.63□□□□□ -2.15
FDFT1-216ENST00000529521 Q96NJ1 140 aa1.63□□□□□ -2.15
FDFT1-216ENST00000529521 CCL19Q99731 98 aa1.63□□□□□ -2.15
FDFT1-216ENST00000529521 CELSR3Q9NYQ7 3312 aa1.63□□□□□ -2.15
FDFT1-216ENST00000529521 NF1P21359 2839 aa1.63□□□□□ -2.15
FDFT1-216ENST00000529521 DMXL2Q8TDJ6 3036 aa1.63□□□□□ -2.15
FDFT1-216ENST00000529521 ZFHX3Q15911 3703 aa1.63□□□□□ -2.15
FDFT1-216ENST00000529521 USP9YO00507 2555 aaPredicted RBP1.62□□□□□ -2.15
FDFT1-216ENST00000529521 ATRQ13535 2644 aa1.62□□□□□ -2.15
FDFT1-216ENST00000529521 AKAP13Q12802 2813 aa1.62□□□□□ -2.15
FDFT1-216ENST00000529521 A0A0J9YWU9 116 aa1.62□□□□□ -2.15
FDFT1-216ENST00000529521 FAM168BA1KXE4 195 aa1.62□□□□□ -2.15
FDFT1-216ENST00000529521 TYMSOSQ8TAI1 123 aa1.62□□□□□ -2.15
FDFT1-216ENST00000529521 PRO2289Q9P1D8 64 aa1.62□□□□□ -2.15
FDFT1-216ENST00000529521 CCDC168Q8NDH2 2452 aa1.62□□□□□ -2.15
FDFT1-216ENST00000529521 JMJD1CQ15652 2540 aa1.62□□□□□ -2.15
FDFT1-216ENST00000529521 HIVEP3Q5T1R4 2406 aa1.61□□□□□ -2.15
FDFT1-216ENST00000529521 MED13LQ71F56 2210 aa1.61□□□□□ -2.15
FDFT1-216ENST00000529521 GVQW2A0A096LPI5 108 aaPredicted RBP1.61□□□□□ -2.15
FDFT1-216ENST00000529521 M0R2N4 97 aa1.61□□□□□ -2.15
FDFT1-216ENST00000529521 HTN1P15515 57 aa1.61□□□□□ -2.15
FDFT1-216ENST00000529521 COX6A2Q02221 97 aa1.61□□□□□ -2.15
FDFT1-216ENST00000529521 PRB3Q04118 309 aaPredicted RBP1.61□□□□□ -2.15
FDFT1-216ENST00000529521 LY6EQ16553 131 aa1.61□□□□□ -2.15
FDFT1-216ENST00000529521 BRD3OSQ6XYD6 125 aa1.61□□□□□ -2.15
FDFT1-216ENST00000529521 Q6ZQY7 126 aa1.61□□□□□ -2.15
FDFT1-216ENST00000529521 PRO0255Q9UI72 69 aa1.61□□□□□ -2.15
FDFT1-216ENST00000529521 FBN1P35555 2871 aaKnown RBP1.61□□□□□ -2.15
FDFT1-216ENST00000529521 STAB1Q9NY15 2570 aa1.61□□□□□ -2.15
FDFT1-216ENST00000529521 TACC2O95359 2948 aa1.61□□□□□ -2.15
FDFT1-216ENST00000529521 AKAP6Q13023 2319 aa1.61□□□□□ -2.15
FDFT1-216ENST00000529521 SORL1Q92673 2214 aa1.6□□□□□ -2.15
FDFT1-216ENST00000529521 NOTCH1P46531 2555 aa1.6□□□□□ -2.15
FDFT1-216ENST00000529521 IGKV2-28A0A075B6P5 120 aa1.6□□□□□ -2.15
FDFT1-216ENST00000529521 A0A1W2PNN7 141 aa1.6□□□□□ -2.15
FDFT1-216ENST00000529521 H3BNG1 76 aa1.6□□□□□ -2.15
FDFT1-216ENST00000529521 IGKV2D-28P01615 120 aa1.6□□□□□ -2.15
FDFT1-216ENST00000529521 KRTAP24-1Q3LI83 254 aa1.6□□□□□ -2.15
FDFT1-216ENST00000529521 LINC00575Q6W349 94 aa1.6□□□□□ -2.15
FDFT1-216ENST00000529521 Q8N9L7 120 aa1.6□□□□□ -2.15
FDFT1-216ENST00000529521 LINC00304Q8N9R0 145 aa1.6□□□□□ -2.15
FDFT1-216ENST00000529521 PSORS1C2Q9UIG4 136 aa1.6□□□□□ -2.15
FDFT1-216ENST00000529521 COL12A1Q99715 3063 aa1.6□□□□□ -2.15
FDFT1-216ENST00000529521 NBASA2RRP1 2371 aa1.59□□□□□ -2.15
FDFT1-216ENST00000529521 CSPG4Q6UVK1 2322 aa1.59□□□□□ -2.15
FDFT1-216ENST00000529521 DEFB131BA0A096LNP1 70 aa1.59□□□□□ -2.15
FDFT1-216ENST00000529521 IGLV6-57P01721 117 aa1.59□□□□□ -2.15
FDFT1-216ENST00000529521 NOP10Q9NPE3 64 aaKnown RBP1.59□□□□□ -2.15
FDFT1-216ENST00000529521 R4GN34 69 aa1.59□□□□□ -2.15
FDFT1-216ENST00000529521 LAMA5O15230 3695 aa1.59□□□□□ -2.16
FDFT1-216ENST00000529521 WDFY3Q8IZQ1 3526 aa1.58□□□□□ -2.16
FDFT1-216ENST00000529521 ITPR2Q14571 2701 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms