RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 H1FX-AS1Q4G0G2 97 aa1.36□□□□□ -2.19
CTR9-204ENST00000529355 Q6ZRN7 208 aaPredicted RBP1.36□□□□□ -2.19
CTR9-204ENST00000529355 UBE2DNLQ8IWF7 75 aa1.36□□□□□ -2.19
CTR9-204ENST00000529355 PTPRZ1P23471 2315 aaPredicted RBP1.35□□□□□ -2.19
CTR9-204ENST00000529355 AKAP6Q13023 2319 aa1.35□□□□□ -2.19
CTR9-204ENST00000529355 HELZ2Q9BYK8 2649 aaKnown RBP1.35□□□□□ -2.19
CTR9-204ENST00000529355 A8MTW9 85 aa1.35□□□□□ -2.19
CTR9-204ENST00000529355 APELAP0DMC3 54 aa1.35□□□□□ -2.19
CTR9-204ENST00000529355 RPL37P61927 97 aaKnown RBP1.35□□□□□ -2.19
CTR9-204ENST00000529355 DEFB110Q30KQ9 67 aa1.35□□□□□ -2.19
CTR9-204ENST00000529355 CLPSL2Q6UWE3 100 aa1.35□□□□□ -2.19
CTR9-204ENST00000529355 Q6ZSA8 131 aa1.35□□□□□ -2.19
CTR9-204ENST00000529355 IGF2RP11717 2491 aa1.34□□□□□ -2.19
CTR9-204ENST00000529355 WNK1Q9H4A3 2382 aa1.34□□□□□ -2.19
CTR9-204ENST00000529355 DEFB105AQ8NG35 78 aa1.34□□□□□ -2.19
CTR9-204ENST00000529355 SPRR1AP35321 89 aa1.33□□□□□ -2.2
CTR9-204ENST00000529355 DEFB123Q8N688 67 aa1.33□□□□□ -2.2
CTR9-204ENST00000529355 FLG2Q5D862 2391 aaPredicted RBP1.33□□□□□ -2.2
CTR9-204ENST00000529355 SPTA1P02549 2419 aa1.32□□□□□ -2.2
CTR9-204ENST00000529355 ALMS1Q8TCU4 4167 aa1.32□□□□□ -2.2
CTR9-204ENST00000529355 PCNX1Q96RV3 2341 aa1.32□□□□□ -2.2
CTR9-204ENST00000529355 H3BUX3 64 aa1.32□□□□□ -2.2
CTR9-204ENST00000529355 RHPN1-AS1Q9BWJ2 59 aa1.32□□□□□ -2.2
CTR9-204ENST00000529355 Q9Y3F1 56 aa1.32□□□□□ -2.2
CTR9-204ENST00000529355 FAM208BQ5VWN6 2430 aa1.32□□□□□ -2.2
CTR9-204ENST00000529355 MAP1BP46821 2468 aaKnown RBP1.32□□□□□ -2.2
CTR9-204ENST00000529355 CSPG4Q6UVK1 2322 aa1.32□□□□□ -2.2
CTR9-204ENST00000529355 DEFB130BP0DP73 79 aa1.31□□□□□ -2.2
CTR9-204ENST00000529355 DEFB130AP0DP74 79 aa1.31□□□□□ -2.2
CTR9-204ENST00000529355 SPRR1BP22528 89 aa1.31□□□□□ -2.2
CTR9-204ENST00000529355 UNQ6190/PRO20217Q6UXQ8 127 aa1.31□□□□□ -2.2
CTR9-204ENST00000529355 SPTBN2O15020 2390 aa1.31□□□□□ -2.2
CTR9-204ENST00000529355 TENM1Q9UKZ4 2725 aa1.31□□□□□ -2.2
CTR9-204ENST00000529355 K7EIL1 84 aa1.3□□□□□ -2.2
CTR9-204ENST00000529355 LYNX1P0DP58 116 aa1.3□□□□□ -2.2
CTR9-204ENST00000529355 DEFB108BQ8NET1 73 aa1.3□□□□□ -2.2
CTR9-204ENST00000529355 APC2O95996 2303 aa1.29□□□□□ -2.2
CTR9-204ENST00000529355 ROS1P08922 2347 aa1.29□□□□□ -2.2
CTR9-204ENST00000529355 DEFB119Q8N690 84 aa1.29□□□□□ -2.2
CTR9-204ENST00000529355 RP1L1Q8IWN7 2480 aaPredicted RBP1.29□□□□□ -2.2
CTR9-204ENST00000529355 CD52P31358 61 aa1.28□□□□□ -2.2
CTR9-204ENST00000529355 PRLHP81277 87 aa1.28□□□□□ -2.2
CTR9-204ENST00000529355 KRTAP21-3Q3LHN1 58 aa1.28□□□□□ -2.2
CTR9-204ENST00000529355 NOP10Q9NPE3 64 aaKnown RBP1.28□□□□□ -2.2
CTR9-204ENST00000529355 HTN1P15515 57 aa1.27□□□□□ -2.21
CTR9-204ENST00000529355 DEFB1P60022 68 aa1.27□□□□□ -2.21
CTR9-204ENST00000529355 KRTAP10-4P60372 401 aaPredicted RBP1.27□□□□□ -2.21
CTR9-204ENST00000529355 C10orf95Q9H7T3 257 aa1.27□□□□□ -2.21
CTR9-204ENST00000529355 CEP250Q9BV73 2442 aa1.26□□□□□ -2.21
CTR9-204ENST00000529355 CACNA1HO95180 2353 aa1.25□□□□□ -2.21
CTR9-204ENST00000529355 SPTBN4Q9H254 2564 aa1.24□□□□□ -2.21
CTR9-204ENST00000529355 LELP1Q5T871 98 aa1.24□□□□□ -2.21
CTR9-204ENST00000529355 PRO0255Q9UI72 69 aa1.24□□□□□ -2.21
CTR9-204ENST00000529355 ZNF462Q96JM2 2506 aa1.23□□□□□ -2.21
CTR9-204ENST00000529355 GVINP1Q7Z2Y8 2422 aa1.23□□□□□ -2.21
CTR9-204ENST00000529355 SPINK1P00995 79 aa1.23□□□□□ -2.21
CTR9-204ENST00000529355 Q5VSD8 79 aa1.23□□□□□ -2.21
CTR9-204ENST00000529355 APLNQ9ULZ1 77 aa1.23□□□□□ -2.21
CTR9-204ENST00000529355 S4R3F8 94 aa1.23□□□□□ -2.21
CTR9-204ENST00000529355 FAM186AA6NE01 2351 aa1.22□□□□□ -2.21
CTR9-204ENST00000529355 WDR87Q6ZQQ6 2873 aa1.22□□□□□ -2.21
CTR9-204ENST00000529355 PIEZO2Q9H5I5 2752 aa1.21□□□□□ -2.22
CTR9-204ENST00000529355 JMJD1CQ15652 2540 aa1.21□□□□□ -2.22
CTR9-204ENST00000529355 C2CD3Q4AC94 2353 aa1.21□□□□□ -2.22
CTR9-204ENST00000529355 CREBBPQ92793 2442 aa1.2□□□□□ -2.22
CTR9-204ENST00000529355 EP400Q96L91 3159 aa1.19□□□□□ -2.22
CTR9-204ENST00000529355 CCDC168Q8NDH2 2452 aa1.18□□□□□ -2.22
CTR9-204ENST00000529355 ABCA2Q9BZC7 2435 aa1.18□□□□□ -2.22
CTR9-204ENST00000529355 DEFB136Q30KP8 78 aa1.18□□□□□ -2.22
CTR9-204ENST00000529355 DEFB133Q30KQ1 61 aa1.18□□□□□ -2.22
CTR9-204ENST00000529355 NCOR1O75376 2440 aa1.18□□□□□ -2.22
CTR9-204ENST00000529355 F8P00451 2351 aa1.18□□□□□ -2.22
CTR9-204ENST00000529355 MGAQ8IWI9 3026 aa1.17□□□□□ -2.22
CTR9-204ENST00000529355 UNC79Q9P2D8 2635 aa1.17□□□□□ -2.22
CTR9-204ENST00000529355 NBASA2RRP1 2371 aa1.17□□□□□ -2.22
CTR9-204ENST00000529355 M0QZ58 72 aa1.17□□□□□ -2.22
CTR9-204ENST00000529355 TENM2Q9NT68 2774 aa1.17□□□□□ -2.22
CTR9-204ENST00000529355 CEP290O15078 2479 aa1.16□□□□□ -2.22
CTR9-204ENST00000529355 A0A0D9SG42 100 aa1.16□□□□□ -2.22
CTR9-204ENST00000529355 H3BNG1 76 aa1.16□□□□□ -2.22
CTR9-204ENST00000529355 EP300Q09472 2414 aaPredicted RBP1.16□□□□□ -2.22
CTR9-204ENST00000529355 SPG11Q96JI7 2443 aa1.16□□□□□ -2.22
CTR9-204ENST00000529355 DEFB124Q8NES8 71 aa1.15□□□□□ -2.23
CTR9-204ENST00000529355 GOLGB1Q14789 3259 aaKnown RBP1.15□□□□□ -2.23
CTR9-204ENST00000529355 COL6A5A8TX70 2615 aa1.15□□□□□ -2.23
CTR9-204ENST00000529355 A0A0C4DFX4 3053 aa1.14□□□□□ -2.23
CTR9-204ENST00000529355 NAV2Q8IVL1 2488 aa1.14□□□□□ -2.23
CTR9-204ENST00000529355 LINC01556Q5JQF7 62 aa1.14□□□□□ -2.23
CTR9-204ENST00000529355 UBR5O95071 2799 aaPredicted RBP1.14□□□□□ -2.23
CTR9-204ENST00000529355 TTC28Q96AY4 2481 aa1.13□□□□□ -2.23
CTR9-204ENST00000529355 DNAH12Q6ZR08 3092 aa1.13□□□□□ -2.23
CTR9-204ENST00000529355 SPINK6Q6UWN8 80 aa1.13□□□□□ -2.23
CTR9-204ENST00000529355 PKD1L2Q7Z442 2459 aa1.13□□□□□ -2.23
CTR9-204ENST00000529355 ABCA12Q86UK0 2595 aa1.12□□□□□ -2.23
CTR9-204ENST00000529355 A0A096LNI7 61 aa1.12□□□□□ -2.23
CTR9-204ENST00000529355 A0A096LPF7 62 aa1.12□□□□□ -2.23
CTR9-204ENST00000529355 CHD7Q9P2D1 2997 aa1.12□□□□□ -2.23
CTR9-204ENST00000529355 PTPN13Q12923 2485 aa1.12□□□□□ -2.23
CTR9-204ENST00000529355 NCOR2Q9Y618 2525 aa1.12□□□□□ -2.23
CTR9-204ENST00000529355 REV3LO60673 3130 aa1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms