RNA–Protein interactions for RNA: ENST00000528865.5

CSTF3-208, Transcript of cleavage stimulation factor subunit 3, human

TSL 5

Gene CSTF3, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSTF3-208	ENST00000528865	LRCOL1	A6NCL2	159 aa		5.2	□□□□□ -1.58
CSTF3-208	ENST00000528865	KRTAP29-1	A8MX34	341 aa	Predicted RBP	5.2	□□□□□ -1.58
CSTF3-208	ENST00000528865	UBE2A	P49459	152 aa		5.2	□□□□□ -1.58
CSTF3-208	ENST00000528865	PHF5A	Q7RTV0	110 aa	Known RBP	5.2	□□□□□ -1.58
CSTF3-208	ENST00000528865	DNAH9	Q9NYC9	4486 aa		5.19	□□□□□ -1.58
CSTF3-208	ENST00000528865		A0A087WSZ3	146 aa		5.19	□□□□□ -1.58
CSTF3-208	ENST00000528865		A0A0G2JQZ4	141 aa		5.19	□□□□□ -1.58
CSTF3-208	ENST00000528865	LOC100996750	A0A140TA64	210 aa		5.18	□□□□□ -1.58
CSTF3-208	ENST00000528865	KRTAP13-1	Q8IUC0	172 aa		5.18	□□□□□ -1.58
CSTF3-208	ENST00000528865	UBE2DNL	Q8IWF7	75 aa		5.18	□□□□□ -1.58
CSTF3-208	ENST00000528865	KRTAP4-6	Q9BYQ5	205 aa		5.18	□□□□□ -1.58
CSTF3-208	ENST00000528865	LINC00472	Q9H8W2	130 aa		5.18	□□□□□ -1.58
CSTF3-208	ENST00000528865	LINC00474	Q9P2X8	69 aa		5.18	□□□□□ -1.58
CSTF3-208	ENST00000528865	hDV103S1	A0JD37	113 aa		5.17	□□□□□ -1.58
CSTF3-208	ENST00000528865	PRR15	Q8IV56	129 aa		5.17	□□□□□ -1.58
CSTF3-208	ENST00000528865	CYP4F30P	Q9H0H9	118 aa		5.17	□□□□□ -1.58
CSTF3-208	ENST00000528865	CHTF8	P0CG12	524 aa		5.16	□□□□□ -1.58
CSTF3-208	ENST00000528865	FAM229B	Q4G0N7	80 aa		5.16	□□□□□ -1.58
CSTF3-208	ENST00000528865		Q6ZRN7	208 aa	Predicted RBP	5.16	□□□□□ -1.58
CSTF3-208	ENST00000528865	NBDY	A0A0U1RRE5	68 aa		5.15	□□□□□ -1.59
CSTF3-208	ENST00000528865		A8MWP4	228 aa		5.15	□□□□□ -1.59
CSTF3-208	ENST00000528865		H3BPC8	53 aa		5.15	□□□□□ -1.59
CSTF3-208	ENST00000528865	NDUFB1	O75438	58 aa		5.15	□□□□□ -1.59
CSTF3-208	ENST00000528865	B9D2	Q9BPU9	175 aa		5.15	□□□□□ -1.59
CSTF3-208	ENST00000528865		J3QL48	77 aa		5.14	□□□□□ -1.59
CSTF3-208	ENST00000528865	DEFB116	Q30KQ4	102 aa		5.14	□□□□□ -1.59
CSTF3-208	ENST00000528865	LINC00336	Q6ZUF6	198 aa		5.14	□□□□□ -1.59
CSTF3-208	ENST00000528865	MP68	P56378	58 aa		5.13	□□□□□ -1.59
CSTF3-208	ENST00000528865	RPL37A	P61513	92 aa	Known RBP	5.13	□□□□□ -1.59
CSTF3-208	ENST00000528865	WFDC13	Q8IUB5	93 aa		5.13	□□□□□ -1.59
CSTF3-208	ENST00000528865	PRO0628	Q9UI54	55 aa		5.13	□□□□□ -1.59
CSTF3-208	ENST00000528865	TRAV22	A0A0B4J277	110 aa		5.12	□□□□□ -1.59
CSTF3-208	ENST00000528865	CASC2	Q6XLA1	102 aa		5.12	□□□□□ -1.59
CSTF3-208	ENST00000528865	C1orf64	Q8NEQ6	169 aa		5.12	□□□□□ -1.59
CSTF3-208	ENST00000528865	PKD1L1	Q8TDX9	2849 aa		5.12	□□□□□ -1.59
CSTF3-208	ENST00000528865	DNAH10	Q8IVF4	4471 aa		5.11	□□□□□ -1.59
CSTF3-208	ENST00000528865	NUPR2	A6NF83	97 aa		5.11	□□□□□ -1.59
CSTF3-208	ENST00000528865	PANO1	I0J062	215 aa		5.11	□□□□□ -1.59
CSTF3-208	ENST00000528865		Q1T7F1	81 aa		5.11	□□□□□ -1.59
CSTF3-208	ENST00000528865	ASB16-AS1	Q495Z4	193 aa		5.11	□□□□□ -1.59
CSTF3-208	ENST00000528865	LINC00483	Q53H64	154 aa		5.11	□□□□□ -1.59
CSTF3-208	ENST00000528865	SPANXA2-OT1	Q8N9U9	137 aa		5.11	□□□□□ -1.59
CSTF3-208	ENST00000528865	SPACA4	Q8TDM5	124 aa		5.11	□□□□□ -1.59
CSTF3-208	ENST00000528865	MAST4	O15021	2626 aa		5.1	□□□□□ -1.59
CSTF3-208	ENST00000528865	FLNB	O75369	2602 aa	Known RBP	5.1	□□□□□ -1.59
CSTF3-208	ENST00000528865	FBN1	P35555	2871 aa	Known RBP	5.09	□□□□□ -1.59
CSTF3-208	ENST00000528865	STAB1	Q9NY15	2570 aa		5.09	□□□□□ -1.59
CSTF3-208	ENST00000528865	MDFI	Q99750	246 aa		5.09	□□□□□ -1.59
CSTF3-208	ENST00000528865	MMP24-AS1	A0A0U1RRL7	71 aa		5.08	□□□□□ -1.6
CSTF3-208	ENST00000528865		H0Y9P7	68 aa		5.08	□□□□□ -1.6
CSTF3-208	ENST00000528865	LINC00208	Q96KT6	92 aa		5.08	□□□□□ -1.6
CSTF3-208	ENST00000528865		Q96NJ1	140 aa		5.08	□□□□□ -1.6
CSTF3-208	ENST00000528865	VPS13D	Q5THJ4	4388 aa		5.08	□□□□□ -1.6
CSTF3-208	ENST00000528865		A0A087WTM6	91 aa		5.07	□□□□□ -1.6
CSTF3-208	ENST00000528865	MPLKIP	Q8TAP9	179 aa		5.07	□□□□□ -1.6
CSTF3-208	ENST00000528865	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	5.07	□□□□□ -1.6
CSTF3-208	ENST00000528865	PLEC	Q15149	4684 aa	Known RBP	5.06	□□□□□ -1.6
CSTF3-208	ENST00000528865	ZNF706	Q9Y5V0	76 aa	Predicted RBP	5.06	□□□□□ -1.6
CSTF3-208	ENST00000528865	DNAH17	Q9UFH2	4485 aa		5.05	□□□□□ -1.6
CSTF3-208	ENST00000528865	TP53AIP1	Q9HCN2	124 aa		5.05	□□□□□ -1.6
CSTF3-208	ENST00000528865	PLAC8	Q9NZF1	115 aa		5.05	□□□□□ -1.6
CSTF3-208	ENST00000528865	MOBP	Q13875	183 aa		5.04	□□□□□ -1.6
CSTF3-208	ENST00000528865		Q6ZR54	194 aa		5.04	□□□□□ -1.6
CSTF3-208	ENST00000528865	NOTCH1	P46531	2555 aa		5.03	□□□□□ -1.6
CSTF3-208	ENST00000528865	IGLV5-52	A0A0A0MRZ9	124 aa		5.03	□□□□□ -1.6
CSTF3-208	ENST00000528865	ZNF861P	O60384	105 aa		5.03	□□□□□ -1.6
CSTF3-208	ENST00000528865	WWC2-AS2	Q96NR7	200 aa		5.03	□□□□□ -1.6
CSTF3-208	ENST00000528865	C8orf17	Q9NRJ1	99 aa		5.03	□□□□□ -1.6
CSTF3-208	ENST00000528865		V9GYY9	64 aa		5.03	□□□□□ -1.6
CSTF3-208	ENST00000528865	IGLV7-46	A0A075B6I9	117 aa		5.02	□□□□□ -1.61
CSTF3-208	ENST00000528865	PSORS1C2	Q9UIG4	136 aa		5.02	□□□□□ -1.61
CSTF3-208	ENST00000528865	IGLV9-49	A0A0B4J1Y8	123 aa		5.01	□□□□□ -1.61
CSTF3-208	ENST00000528865		A0A1B0GVX0	72 aa		5.01	□□□□□ -1.61
CSTF3-208	ENST00000528865	RTL8C	O15255	209 aa		5.01	□□□□□ -1.61
CSTF3-208	ENST00000528865	PRR4	Q16378	134 aa		5.01	□□□□□ -1.61
CSTF3-208	ENST00000528865	BAHCC1	Q9P281	2608 aa		5	□□□□□ -1.61
CSTF3-208	ENST00000528865	BRK1	Q8WUW1	75 aa		5	□□□□□ -1.61
CSTF3-208	ENST00000528865	C1orf195	Q5TG92	126 aa		4.99	□□□□□ -1.61
CSTF3-208	ENST00000528865	DNAH8	Q96JB1	4490 aa		4.98	□□□□□ -1.61
CSTF3-208	ENST00000528865		Q8N9P0	234 aa	Predicted RBP	4.98	□□□□□ -1.61
CSTF3-208	ENST00000528865	MRPL34	Q9BQ48	92 aa	Known RBP	4.98	□□□□□ -1.61
CSTF3-208	ENST00000528865	COL6A5	A8TX70	2615 aa		4.97	□□□□□ -1.61
CSTF3-208	ENST00000528865	DNAH2	Q9P225	4427 aa		4.97	□□□□□ -1.61
CSTF3-208	ENST00000528865	CD164	Q04900	197 aa		4.97	□□□□□ -1.61
CSTF3-208	ENST00000528865	LIMD2	Q9BT23	127 aa		4.97	□□□□□ -1.61
CSTF3-208	ENST00000528865	CDK2AP2	O75956	126 aa		4.96	□□□□□ -1.62
CSTF3-208	ENST00000528865	IGLV7-43	P04211	117 aa		4.96	□□□□□ -1.62
CSTF3-208	ENST00000528865	DNAH6	Q9C0G6	4158 aa		4.95	□□□□□ -1.62
CSTF3-208	ENST00000528865	SSBP3-AS1	Q7Z2R9	100 aa		4.95	□□□□□ -1.62
CSTF3-208	ENST00000528865	MGAM2	Q2M2H8	2515 aa		4.94	□□□□□ -1.62
CSTF3-208	ENST00000528865	LYST	Q99698	3801 aa		4.94	□□□□□ -1.62
CSTF3-208	ENST00000528865	IGHV6-1	A0A0B4J1U7	121 aa		4.94	□□□□□ -1.62
CSTF3-208	ENST00000528865	PSPHP1	O15172	72 aa		4.94	□□□□□ -1.62
CSTF3-208	ENST00000528865		Q5VV11	94 aa		4.94	□□□□□ -1.62
CSTF3-208	ENST00000528865	COA5	Q86WW8	74 aa		4.94	□□□□□ -1.62
CSTF3-208	ENST00000528865	ANAPC11	Q9NYG5	84 aa		4.94	□□□□□ -1.62
CSTF3-208	ENST00000528865	NBEAL1	Q6ZS30	2694 aa		4.93	□□□□□ -1.62
CSTF3-208	ENST00000528865	STAB2	Q8WWQ8	2551 aa		4.93	□□□□□ -1.62
CSTF3-208	ENST00000528865		A0A087X002	238 aa		4.93	□□□□□ -1.62
CSTF3-208	ENST00000528865	LOC101927531	A0A1B0GV80	90 aa		4.93	□□□□□ -1.62

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