RNA–Protein interactions for RNA: ENST00000528762.1

BRCA2-203, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 4

Gene BRCA2, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-203ENST00000528762 PKHD1P08F94 4074 aa-0.07□□□□□ -2.42
BRCA2-203ENST00000528762 MUC12Q9UKN1 5478 aa-0.07□□□□□ -2.42
BRCA2-203ENST00000528762 CREBBPQ92793 2442 aa-0.07□□□□□ -2.42
BRCA2-203ENST00000528762 MAP3K1Q13233 1512 aa-0.08□□□□□ -2.42
BRCA2-203ENST00000528762 TGP01266 2768 aa-0.08□□□□□ -2.42
BRCA2-203ENST00000528762 SRRM2Q9UQ35 2752 aaKnown RBP-0.08□□□□□ -2.42
BRCA2-203ENST00000528762 PTPN23Q9H3S7 1636 aa-0.08□□□□□ -2.42
BRCA2-203ENST00000528762 SPG11Q96JI7 2443 aa-0.08□□□□□ -2.42
BRCA2-203ENST00000528762 STAB2Q8WWQ8 2551 aa-0.08□□□□□ -2.42
BRCA2-203ENST00000528762 SPRR2BP35325 72 aa-0.08□□□□□ -2.42
BRCA2-203ENST00000528762 ATP5EP2Q5VTU8 51 aa-0.08□□□□□ -2.42
BRCA2-203ENST00000528762 C18orf32Q8TCD1 76 aa-0.08□□□□□ -2.42
BRCA2-203ENST00000528762 ZZEF1O43149 2961 aa-0.09□□□□□ -2.42
BRCA2-203ENST00000528762 RRBP1Q9P2E9 1410 aaKnown RBP-0.09□□□□□ -2.42
BRCA2-203ENST00000528762 H0YAA0 97 aa-0.09□□□□□ -2.42
BRCA2-203ENST00000528762 H0YGG7 62 aa-0.09□□□□□ -2.42
BRCA2-203ENST00000528762 NF1P21359 2839 aa-0.09□□□□□ -2.42
BRCA2-203ENST00000528762 ABCC1P33527 1531 aa-0.09□□□□□ -2.42
BRCA2-203ENST00000528762 SCRIBQ14160 1630 aa-0.09□□□□□ -2.42
BRCA2-203ENST00000528762 EIF2AK4Q9P2K8 1649 aaKnown RBP-0.09□□□□□ -2.42
BRCA2-203ENST00000528762 PLXNC1O60486 1568 aa-0.1□□□□□ -2.42
BRCA2-203ENST00000528762 CEP290O15078 2479 aa-0.1□□□□□ -2.43
BRCA2-203ENST00000528762 HMGA1P17096 107 aaKnown RBP-0.1□□□□□ -2.43
BRCA2-203ENST00000528762 KRTAP6-2Q3LI66 62 aa-0.1□□□□□ -2.43
BRCA2-203ENST00000528762 COX6B2Q6YFQ2 88 aa-0.1□□□□□ -2.43
BRCA2-203ENST00000528762 HILPDAQ9Y5L2 63 aa-0.1□□□□□ -2.43
BRCA2-203ENST00000528762 GCN1Q92616 2671 aaKnown RBP-0.1□□□□□ -2.43
BRCA2-203ENST00000528762 LMTK2Q8IWU2 1503 aa-0.1□□□□□ -2.43
BRCA2-203ENST00000528762 PDZD2O15018 2839 aa-0.1□□□□□ -2.43
BRCA2-203ENST00000528762 DMXL1Q9Y485 3027 aa-0.11□□□□□ -2.43
BRCA2-203ENST00000528762 VPS13BQ7Z7G8 4022 aa-0.11□□□□□ -2.43
BRCA2-203ENST00000528762 MUC2Q02817 5179 aa-0.11□□□□□ -2.43
BRCA2-203ENST00000528762 NBPF19A0A087WUL8 3843 aa-0.11□□□□□ -2.43
BRCA2-203ENST00000528762 ZC3H13Q5T200 1668 aaKnown RBP-0.11□□□□□ -2.43
BRCA2-203ENST00000528762 UGGT2Q9NYU1 1516 aa-0.12□□□□□ -2.43
BRCA2-203ENST00000528762 ABCA9Q8IUA7 1624 aa-0.12□□□□□ -2.43
BRCA2-203ENST00000528762 LCE6AA0A183 80 aa-0.12□□□□□ -2.43
BRCA2-203ENST00000528762 C3orf79P0CE67 100 aa-0.12□□□□□ -2.43
BRCA2-203ENST00000528762 KRTAP6-1Q3LI64 71 aa-0.12□□□□□ -2.43
BRCA2-203ENST00000528762 ENHOQ6UWT2 76 aa-0.12□□□□□ -2.43
BRCA2-203ENST00000528762 DIP2AQ14689 1571 aa-0.12□□□□□ -2.43
BRCA2-203ENST00000528762 EPG5Q9HCE0 2579 aa-0.12□□□□□ -2.43
BRCA2-203ENST00000528762 ANKARQ7Z5J8 1434 aa-0.13□□□□□ -2.43
BRCA2-203ENST00000528762 CDC42BPGQ6DT37 1551 aa-0.13□□□□□ -2.43
BRCA2-203ENST00000528762 CD163L1Q9NR16 1453 aa-0.13□□□□□ -2.43
BRCA2-203ENST00000528762 DEFB130BP0DP73 79 aa-0.13□□□□□ -2.43
BRCA2-203ENST00000528762 DEFB130AP0DP74 79 aa-0.13□□□□□ -2.43
BRCA2-203ENST00000528762 IAPPP10997 89 aa-0.13□□□□□ -2.43
BRCA2-203ENST00000528762 KRTAP19-7Q3SYF9 63 aa-0.13□□□□□ -2.43
BRCA2-203ENST00000528762 CUBNO60494 3623 aa-0.13□□□□□ -2.43
BRCA2-203ENST00000528762 BPTFQ12830 3046 aa-0.13□□□□□ -2.43
BRCA2-203ENST00000528762 HIVEP1P15822 2718 aa-0.13□□□□□ -2.43
BRCA2-203ENST00000528762 DNAH9Q9NYC9 4486 aa-0.13□□□□□ -2.43
BRCA2-203ENST00000528762 LRRK2Q5S007 2527 aa-0.13□□□□□ -2.43
BRCA2-203ENST00000528762 SONP18583 2426 aaKnown RBP-0.13□□□□□ -2.43
BRCA2-203ENST00000528762 DEPDC5O75140 1603 aa-0.13□□□□□ -2.43
BRCA2-203ENST00000528762 RNF17Q9BXT8 1623 aaKnown RBP-0.13□□□□□ -2.43
BRCA2-203ENST00000528762 AKAP9Q99996 3911 aa-0.14□□□□□ -2.43
BRCA2-203ENST00000528762 NHSQ6T4R5 1651 aa-0.14□□□□□ -2.43
BRCA2-203ENST00000528762 H3BNG1 76 aa-0.14□□□□□ -2.43
BRCA2-203ENST00000528762 CRIP1P50238 77 aa-0.14□□□□□ -2.43
BRCA2-203ENST00000528762 FASNP49327 2511 aaKnown RBP-0.14□□□□□ -2.43
BRCA2-203ENST00000528762 MXRA5Q9NR99 2828 aa-0.14□□□□□ -2.43
BRCA2-203ENST00000528762 CCDC88BA6NC98 1476 aa-0.15□□□□□ -2.43
BRCA2-203ENST00000528762 KALRNO60229 2985 aa-0.15□□□□□ -2.43
BRCA2-203ENST00000528762 PCLOQ9Y6V0 5065 aa-0.15□□□□□ -2.43
BRCA2-203ENST00000528762 HFM1A2PYH4 1435 aa-0.15□□□□□ -2.43
BRCA2-203ENST00000528762 KMT2CQ8NEZ4 4911 aaKnown RBP-0.15□□□□□ -2.43
BRCA2-203ENST00000528762 PKD1L2Q7Z442 2459 aa-0.15□□□□□ -2.43
BRCA2-203ENST00000528762 CCDC168Q8NDH2 2452 aa-0.15□□□□□ -2.43
BRCA2-203ENST00000528762 MADDQ8WXG6 1647 aa-0.16□□□□□ -2.43
BRCA2-203ENST00000528762 UBL5Q9BZL1 73 aa-0.16□□□□□ -2.44
BRCA2-203ENST00000528762 GNG13Q9P2W3 67 aa-0.16□□□□□ -2.44
BRCA2-203ENST00000528762 RALGAPBQ86X10 1494 aa-0.16□□□□□ -2.44
BRCA2-203ENST00000528762 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.17□□□□□ -2.44
BRCA2-203ENST00000528762 ITSN2Q9NZM3 1697 aa-0.17□□□□□ -2.44
BRCA2-203ENST00000528762 PKHD1L1Q86WI1 4243 aa-0.17□□□□□ -2.44
BRCA2-203ENST00000528762 DEFB106AQ8N104 65 aa-0.17□□□□□ -2.44
BRCA2-203ENST00000528762 SMCO4Q9NRQ5 59 aa-0.17□□□□□ -2.44
BRCA2-203ENST00000528762 ANKRD50Q9ULJ7 1429 aa-0.17□□□□□ -2.44
BRCA2-203ENST00000528762 ANKRD11Q6UB99 2663 aaPredicted RBP-0.17□□□□□ -2.44
BRCA2-203ENST00000528762 FAT3Q8TDW7 4589 aa-0.17□□□□□ -2.44
BRCA2-203ENST00000528762 C3P01024 1663 aa-0.18□□□□□ -2.44
BRCA2-203ENST00000528762 ASXL1Q8IXJ9 1541 aa-0.18□□□□□ -2.44
BRCA2-203ENST00000528762 KIAA0586Q9BVV6 1533 aa-0.18□□□□□ -2.44
BRCA2-203ENST00000528762 USH2AO75445 5202 aa-0.18□□□□□ -2.44
BRCA2-203ENST00000528762 MTORP42345 2549 aa-0.18□□□□□ -2.44
BRCA2-203ENST00000528762 DEFB131BA0A096LNP1 70 aa-0.18□□□□□ -2.44
BRCA2-203ENST00000528762 LYNX1G3V0Z9 82 aa-0.18□□□□□ -2.44
BRCA2-203ENST00000528762 SPRR2AP35326 72 aa-0.18□□□□□ -2.44
BRCA2-203ENST00000528762 ATXN8Q156A1 80 aa-0.18□□□□□ -2.44
BRCA2-203ENST00000528762 KCNQ1DNQ9H478 68 aa-0.18□□□□□ -2.44
BRCA2-203ENST00000528762 ACACAQ13085 2346 aa-0.18□□□□□ -2.44
BRCA2-203ENST00000528762 KIF1AQ12756 1690 aa-0.18□□□□□ -2.44
BRCA2-203ENST00000528762 TACC2O95359 2948 aa-0.18□□□□□ -2.44
BRCA2-203ENST00000528762 HTTP42858 3142 aa-0.19□□□□□ -2.44
BRCA2-203ENST00000528762 LAMA5O15230 3695 aa-0.19□□□□□ -2.44
BRCA2-203ENST00000528762 DUOX2Q9NRD8 1548 aa-0.19□□□□□ -2.44
BRCA2-203ENST00000528762 MYO18BQ8IUG5 2567 aa-0.19□□□□□ -2.44
BRCA2-203ENST00000528762 A0A1B0GUL6 1792 aa-0.19□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms