RNA–Protein interactions for RNA: ENST00000527586.1

VPS26B-204, Transcript of VPS26, retromer complex component B, humanhuman

TSL 3

Gene VPS26B, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-204ENST00000527586 FAM104AQ969W3 186 aa3.16□□□□□ -1.9
VPS26B-204ENST00000527586 TIMM21Q9BVV7 248 aa3.16□□□□□ -1.9
VPS26B-204ENST00000527586 LOC107984156A0A0G2JMH3 177 aa3.15□□□□□ -1.91
VPS26B-204ENST00000527586 CTXND1A0A1B0GTU2 59 aa3.15□□□□□ -1.91
VPS26B-204ENST00000527586 E9PLD3 99 aa3.15□□□□□ -1.91
VPS26B-204ENST00000527586 MT-ATP8P03928 68 aa3.15□□□□□ -1.91
VPS26B-204ENST00000527586 MT4P47944 62 aa3.15□□□□□ -1.91
VPS26B-204ENST00000527586 POLR2KP53803 58 aaKnown RBP3.15□□□□□ -1.91
VPS26B-204ENST00000527586 HBBP68871 147 aa3.15□□□□□ -1.91
VPS26B-204ENST00000527586 TWIST1Q15672 202 aa3.15□□□□□ -1.91
VPS26B-204ENST00000527586 ARL17AQ8IVW1 177 aa3.15□□□□□ -1.91
VPS26B-204ENST00000527586 Q8IZM0 81 aa3.15□□□□□ -1.91
VPS26B-204ENST00000527586 MPLKIPQ8TAP9 179 aa3.15□□□□□ -1.91
VPS26B-204ENST00000527586 COPS9Q8WXC6 57 aa3.15□□□□□ -1.91
VPS26B-204ENST00000527586 TRBV27A0A0K0K1C4 114 aa3.14□□□□□ -1.91
VPS26B-204ENST00000527586 KANTRA0A1W2PQU2 76 aa3.14□□□□□ -1.91
VPS26B-204ENST00000527586 TMEM250H0YL14 139 aa3.14□□□□□ -1.91
VPS26B-204ENST00000527586 H7C2G1 150 aa3.14□□□□□ -1.91
VPS26B-204ENST00000527586 PSPHP1O15172 72 aa3.14□□□□□ -1.91
VPS26B-204ENST00000527586 IGLC3P0DOY3 106 aa3.14□□□□□ -1.91
VPS26B-204ENST00000527586 MP68P56378 58 aa3.14□□□□□ -1.91
VPS26B-204ENST00000527586 KRTAP19-4Q3LI73 84 aa3.14□□□□□ -1.91
VPS26B-204ENST00000527586 SLC25A34Q6PIV7 304 aa3.14□□□□□ -1.91
VPS26B-204ENST00000527586 FAM213BQ8TBF2 198 aa3.14□□□□□ -1.91
VPS26B-204ENST00000527586 BRK1Q8WUW1 75 aa3.14□□□□□ -1.91
VPS26B-204ENST00000527586 SMIM26A0A096LP01 95 aa3.13□□□□□ -1.91
VPS26B-204ENST00000527586 LOC389332A0A1B0GUA5 103 aa3.13□□□□□ -1.91
VPS26B-204ENST00000527586 C9orf118A6NHY6 69 aa3.13□□□□□ -1.91
VPS26B-204ENST00000527586 ERC2-IT1O76042 136 aa3.13□□□□□ -1.91
VPS26B-204ENST00000527586 SEC11AP67812 179 aa3.13□□□□□ -1.91
VPS26B-204ENST00000527586 ZNF345Q14585 488 aa3.13□□□□□ -1.91
VPS26B-204ENST00000527586 ADIRFQ15847 76 aa3.13□□□□□ -1.91
VPS26B-204ENST00000527586 Q1RN00 199 aa3.13□□□□□ -1.91
VPS26B-204ENST00000527586 BAGE2Q86Y30 109 aa3.13□□□□□ -1.91
VPS26B-204ENST00000527586 HIST1H4GQ99525 98 aa3.13□□□□□ -1.91
VPS26B-204ENST00000527586 TRAV9-1A0A075B6T8 112 aa3.12□□□□□ -1.91
VPS26B-204ENST00000527586 UMAD1C9J7I0 102 aa3.12□□□□□ -1.91
VPS26B-204ENST00000527586 H3BMG7 143 aa3.12□□□□□ -1.91
VPS26B-204ENST00000527586 H3BRM9 83 aa3.12□□□□□ -1.91
VPS26B-204ENST00000527586 TRACP01848 142 aa3.12□□□□□ -1.91
VPS26B-204ENST00000527586 CXCL5P42830 114 aa3.12□□□□□ -1.91
VPS26B-204ENST00000527586 HINT1P49773 126 aaPredicted RBP3.12□□□□□ -1.91
VPS26B-204ENST00000527586 LINC01545Q5VT33 79 aa3.12□□□□□ -1.91
VPS26B-204ENST00000527586 TOMM6Q96B49 74 aa3.12□□□□□ -1.91
VPS26B-204ENST00000527586 OBSCN-AS1Q96MR7 158 aa3.12□□□□□ -1.91
VPS26B-204ENST00000527586 RPS10P5Q9NQ39 176 aa3.12□□□□□ -1.91
VPS26B-204ENST00000527586 A8MUN3 132 aa3.11□□□□□ -1.91
VPS26B-204ENST00000527586 LST1O00453 97 aa3.11□□□□□ -1.91
VPS26B-204ENST00000527586 SNCGO76070 127 aa3.11□□□□□ -1.91
VPS26B-204ENST00000527586 FABP2P12104 132 aa3.11□□□□□ -1.91
VPS26B-204ENST00000527586 HRES1P13985 223 aa3.11□□□□□ -1.91
VPS26B-204ENST00000527586 RPL39P62891 51 aaKnown RBP3.11□□□□□ -1.91
VPS26B-204ENST00000527586 SMIM29Q86T20 159 aa3.11□□□□□ -1.91
VPS26B-204ENST00000527586 FAM218AQ96MZ4 157 aa3.11□□□□□ -1.91
VPS26B-204ENST00000527586 GNG13Q9P2W3 67 aa3.11□□□□□ -1.91
VPS26B-204ENST00000527586 SERP1Q9Y6X1 66 aa3.11□□□□□ -1.91
VPS26B-204ENST00000527586 TRBV20OR9-2A0A075B6H5 130 aa3.1□□□□□ -1.91
VPS26B-204ENST00000527586 IGHV6-1A0A0B4J1U7 121 aa3.1□□□□□ -1.91
VPS26B-204ENST00000527586 ETDCA0A1B0GVM5 59 aa3.1□□□□□ -1.91
VPS26B-204ENST00000527586 ZNF73O43830 326 aaPredicted RBP3.1□□□□□ -1.91
VPS26B-204ENST00000527586 CCL20P78556 96 aa3.1□□□□□ -1.91
VPS26B-204ENST00000527586 MRPS36P82909 103 aaKnown RBP3.1□□□□□ -1.91
VPS26B-204ENST00000527586 LCA10Q71F78 164 aa3.1□□□□□ -1.91
VPS26B-204ENST00000527586 TEN1Q86WV5 123 aa3.1□□□□□ -1.91
VPS26B-204ENST00000527586 A8MWL6 223 aa3.09□□□□□ -1.91
VPS26B-204ENST00000527586 C9JQL5 133 aa3.09□□□□□ -1.91
VPS26B-204ENST00000527586 H3BT86 120 aa3.09□□□□□ -1.91
VPS26B-204ENST00000527586 BVES-AS1Q5T3Y7 98 aa3.09□□□□□ -1.91
VPS26B-204ENST00000527586 Q8NDZ9 215 aa3.09□□□□□ -1.91
VPS26B-204ENST00000527586 MANBALQ9NQG1 85 aa3.09□□□□□ -1.91
VPS26B-204ENST00000527586 SPCS1Q9Y6A9 102 aa3.09□□□□□ -1.91
VPS26B-204ENST00000527586 COX7CP15954 63 aa3.08□□□□□ -1.92
VPS26B-204ENST00000527586 LINC00313P59037 77 aa3.08□□□□□ -1.92
VPS26B-204ENST00000527586 KRTAP19-8Q3LI54 63 aa3.08□□□□□ -1.92
VPS26B-204ENST00000527586 SPATA45Q537H7 98 aa3.08□□□□□ -1.92
VPS26B-204ENST00000527586 PCP2Q8IVA1 136 aa3.08□□□□□ -1.92
VPS26B-204ENST00000527586 TRBV24-1A0A075B6N3 115 aa3.07□□□□□ -1.92
VPS26B-204ENST00000527586 A0A1W2PPM0 123 aa3.07□□□□□ -1.92
VPS26B-204ENST00000527586 SPRR1AP35321 89 aa3.07□□□□□ -1.92
VPS26B-204ENST00000527586 PMCHL1Q16048 86 aa3.07□□□□□ -1.92
VPS26B-204ENST00000527586 C11orf52Q96A22 123 aa3.07□□□□□ -1.92
VPS26B-204ENST00000527586 PMCHL2Q9BQD1 86 aa3.07□□□□□ -1.92
VPS26B-204ENST00000527586 C20orf78Q9BR46 151 aa3.07□□□□□ -1.92
VPS26B-204ENST00000527586 CNFNQ9BYD5 112 aa3.07□□□□□ -1.92
VPS26B-204ENST00000527586 SCGB1C2P0DMR2 95 aa3.06□□□□□ -1.92
VPS26B-204ENST00000527586 NPC2P61916 151 aa3.06□□□□□ -1.92
VPS26B-204ENST00000527586 ZCCHC13Q8WW36 166 aaKnown RBP3.06□□□□□ -1.92
VPS26B-204ENST00000527586 PPDPFLQ8WWR9 84 aa3.06□□□□□ -1.92
VPS26B-204ENST00000527586 PRELID3AQ96N28 172 aa3.06□□□□□ -1.92
VPS26B-204ENST00000527586 MUC5BQ9HC84 5762 aaPredicted RBP3.06□□□□□ -1.92
VPS26B-204ENST00000527586 TRBV7-7A0A0K0K1E9 115 aa3.05□□□□□ -1.92
VPS26B-204ENST00000527586 TMEM256-PLSCR3K7ERE1 68 aa3.05□□□□□ -1.92
VPS26B-204ENST00000527586 SRP19P09132 144 aaKnown RBP3.05□□□□□ -1.92
VPS26B-204ENST00000527586 Q96NJ1 140 aa3.05□□□□□ -1.92
VPS26B-204ENST00000527586 SND1-IT1Q9HBX3 110 aa3.05□□□□□ -1.92
VPS26B-204ENST00000527586 RPL23P62829 140 aaKnown RBP3.04□□□□□ -1.92
VPS26B-204ENST00000527586 C18orf32Q8TCD1 76 aa3.04□□□□□ -1.92
VPS26B-204ENST00000527586 Q9BRP9 147 aa3.04□□□□□ -1.92
VPS26B-204ENST00000527586 IGLV5-45A0A087WSX0 123 aa3.03□□□□□ -1.92
VPS26B-204ENST00000527586 KRTAP16-1A8MUX0 517 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms