RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 PLECQ15149 4684 aaKnown RBP8.01□□□□□ -1.13
CAPN1-208ENST00000527323 KRTAP4-16G5E9R7 235 aaPredicted RBP8.01□□□□□ -1.13
CAPN1-208ENST00000527323 K7EQZ3 153 aa8.01□□□□□ -1.13
CAPN1-208ENST00000527323 DNAH10OSP0CZ25 163 aa8.01□□□□□ -1.13
CAPN1-208ENST00000527323 MRPL55Q7Z7F7 128 aaKnown RBP8.01□□□□□ -1.13
CAPN1-208ENST00000527323 A0A0G2JQZ4 141 aa8□□□□□ -1.13
CAPN1-208ENST00000527323 A0A1W2PNN7 141 aa8□□□□□ -1.13
CAPN1-208ENST00000527323 DSCR10P59022 87 aa8□□□□□ -1.13
CAPN1-208ENST00000527323 SPRR1AP35321 89 aa7.99□□□□□ -1.13
CAPN1-208ENST00000527323 DEFB116Q30KQ4 102 aa7.99□□□□□ -1.13
CAPN1-208ENST00000527323 SPRR4Q96PI1 79 aa7.99□□□□□ -1.13
CAPN1-208ENST00000527323 KRTAP7-1Q8IUC3 87 aa7.98□□□□□ -1.13
CAPN1-208ENST00000527323 PRR4Q16378 134 aa7.97□□□□□ -1.13
CAPN1-208ENST00000527323 IGLV5-37A0A075B6J1 123 aa7.97□□□□□ -1.13
CAPN1-208ENST00000527323 REG3GQ6UW15 175 aa7.97□□□□□ -1.13
CAPN1-208ENST00000527323 LINC00476Q8WZB0 136 aa7.97□□□□□ -1.13
CAPN1-208ENST00000527323 LINC00588Q9Y4M8 146 aa7.97□□□□□ -1.13
CAPN1-208ENST00000527323 HCG22E2RYF7 251 aa7.96□□□□□ -1.14
CAPN1-208ENST00000527323 PSCAO43653 123 aa7.95□□□□□ -1.14
CAPN1-208ENST00000527323 WFDC13Q8IUB5 93 aa7.95□□□□□ -1.14
CAPN1-208ENST00000527323 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.94□□□□□ -1.14
CAPN1-208ENST00000527323 KMT2AQ03164 3969 aa7.94□□□□□ -1.14
CAPN1-208ENST00000527323 B9D2Q9BPU9 175 aa7.94□□□□□ -1.14
CAPN1-208ENST00000527323 hDV103S1A0JD37 113 aa7.94□□□□□ -1.14
CAPN1-208ENST00000527323 C1orf64Q8NEQ6 169 aa7.94□□□□□ -1.14
CAPN1-208ENST00000527323 IGKV2-24A0A0C4DH68 120 aa7.93□□□□□ -1.14
CAPN1-208ENST00000527323 PRLHP81277 87 aa7.93□□□□□ -1.14
CAPN1-208ENST00000527323 LCE6AA0A183 80 aa7.92□□□□□ -1.14
CAPN1-208ENST00000527323 A0A087WSZ3 146 aa7.92□□□□□ -1.14
CAPN1-208ENST00000527323 IGFL1Q6UW32 110 aa7.92□□□□□ -1.14
CAPN1-208ENST00000527323 ZCCHC13Q8WW36 166 aaKnown RBP7.9□□□□□ -1.14
CAPN1-208ENST00000527323 MP68P56378 58 aa7.89□□□□□ -1.15
CAPN1-208ENST00000527323 RPL37AP61513 92 aaKnown RBP7.89□□□□□ -1.15
CAPN1-208ENST00000527323 UBE2DNLQ8IWF7 75 aa7.89□□□□□ -1.15
CAPN1-208ENST00000527323 UBE2AP49459 152 aa7.87□□□□□ -1.15
CAPN1-208ENST00000527323 KRTAP1-5Q9BYS1 174 aa7.87□□□□□ -1.15
CAPN1-208ENST00000527323 LINC00208Q96KT6 92 aa7.87□□□□□ -1.15
CAPN1-208ENST00000527323 PSPHP1O15172 72 aa7.87□□□□□ -1.15
CAPN1-208ENST00000527323 DNAH1Q9P2D7 4330 aa7.86□□□□□ -1.15
CAPN1-208ENST00000527323 A0A096LNI7 61 aa7.86□□□□□ -1.15
CAPN1-208ENST00000527323 C1orf195Q5TG92 126 aa7.86□□□□□ -1.15
CAPN1-208ENST00000527323 NDUFB1O75438 58 aa7.85□□□□□ -1.15
CAPN1-208ENST00000527323 Q1T7F1 81 aa7.83□□□□□ -1.16
CAPN1-208ENST00000527323 CASC2Q6XLA1 102 aa7.82□□□□□ -1.16
CAPN1-208ENST00000527323 C16orf90A8MZG2 172 aa7.82□□□□□ -1.16
CAPN1-208ENST00000527323 CYP4F30PQ9H0H9 118 aa7.82□□□□□ -1.16
CAPN1-208ENST00000527323 SRRM2Q9UQ35 2752 aaKnown RBP7.81□□□□□ -1.16
CAPN1-208ENST00000527323 HYDINQ4G0P3 5121 aa7.8□□□□□ -1.16
CAPN1-208ENST00000527323 TRAV22A0A0B4J277 110 aa7.8□□□□□ -1.16
CAPN1-208ENST00000527323 H0Y9P7 68 aa7.8□□□□□ -1.16
CAPN1-208ENST00000527323 APLNQ9ULZ1 77 aa7.8□□□□□ -1.16
CAPN1-208ENST00000527323 PHF5AQ7RTV0 110 aaKnown RBP7.8□□□□□ -1.16
CAPN1-208ENST00000527323 IGLV8-61A0A075B6I0 122 aa7.79□□□□□ -1.16
CAPN1-208ENST00000527323 CHTF8P0CG12 524 aa7.79□□□□□ -1.16
CAPN1-208ENST00000527323 LY6G6CO95867 125 aa7.78□□□□□ -1.16
CAPN1-208ENST00000527323 H0Y9J4 135 aa7.77□□□□□ -1.16
CAPN1-208ENST00000527323 PRR15Q8IV56 129 aa7.77□□□□□ -1.16
CAPN1-208ENST00000527323 KRTAP29-1A8MX34 341 aaPredicted RBP7.77□□□□□ -1.17
CAPN1-208ENST00000527323 A8MUN3 132 aa7.76□□□□□ -1.17
CAPN1-208ENST00000527323 FAM229AH3BQW9 127 aa7.76□□□□□ -1.17
CAPN1-208ENST00000527323 CNBPP62633 177 aaKnown RBP7.75□□□□□ -1.17
CAPN1-208ENST00000527323 KRTAP11-1Q8IUC1 163 aa7.75□□□□□ -1.17
CAPN1-208ENST00000527323 VPS13DQ5THJ4 4388 aa7.75□□□□□ -1.17
CAPN1-208ENST00000527323 A8MWP4 228 aa7.75□□□□□ -1.17
CAPN1-208ENST00000527323 FRAS1Q86XX4 4008 aa7.73□□□□□ -1.17
CAPN1-208ENST00000527323 H3BPC8 53 aa7.72□□□□□ -1.17
CAPN1-208ENST00000527323 LINC00472Q9H8W2 130 aa7.72□□□□□ -1.17
CAPN1-208ENST00000527323 DNAH2Q9P225 4427 aa7.7□□□□□ -1.18
CAPN1-208ENST00000527323 NUPR2A6NF83 97 aa7.7□□□□□ -1.18
CAPN1-208ENST00000527323 SPANXA2-OT1Q8N9U9 137 aa7.7□□□□□ -1.18
CAPN1-208ENST00000527323 SPRR1BP22528 89 aa7.69□□□□□ -1.18
CAPN1-208ENST00000527323 C14orf177Q52M58 125 aa7.69□□□□□ -1.18
CAPN1-208ENST00000527323 CHKB-CPT1BH3BT56 60 aa7.67□□□□□ -1.18
CAPN1-208ENST00000527323 CD164Q04900 197 aa7.67□□□□□ -1.18
CAPN1-208ENST00000527323 IGLV9-49A0A0B4J1Y8 123 aa7.67□□□□□ -1.18
CAPN1-208ENST00000527323 PCOTHQ58A44 107 aa7.67□□□□□ -1.18
CAPN1-208ENST00000527323 KMT2CQ8NEZ4 4911 aaKnown RBP7.67□□□□□ -1.18
CAPN1-208ENST00000527323 PRR15LQ9BU68 103 aa7.66□□□□□ -1.18
CAPN1-208ENST00000527323 DYNC2H1Q8NCM8 4307 aaKnown RBP7.65□□□□□ -1.18
CAPN1-208ENST00000527323 NBDYA0A0U1RRE5 68 aa7.65□□□□□ -1.18
CAPN1-208ENST00000527323 PMAIP1Q13794 54 aa7.65□□□□□ -1.18
CAPN1-208ENST00000527323 Q5VV11 94 aa7.65□□□□□ -1.18
CAPN1-208ENST00000527323 Q8N9P0 234 aaPredicted RBP7.65□□□□□ -1.18
CAPN1-208ENST00000527323 MMP24-AS1A0A0U1RRL7 71 aa7.65□□□□□ -1.18
CAPN1-208ENST00000527323 LIMD2Q9BT23 127 aa7.65□□□□□ -1.19
CAPN1-208ENST00000527323 KRTAP21-3Q3LHN1 58 aa7.64□□□□□ -1.19
CAPN1-208ENST00000527323 C9orf163Q8N9P6 203 aa7.64□□□□□ -1.19
CAPN1-208ENST00000527323 A8MU10 97 aa7.63□□□□□ -1.19
CAPN1-208ENST00000527323 NDUFS5O43920 106 aa7.63□□□□□ -1.19
CAPN1-208ENST00000527323 DNAH6Q9C0G6 4158 aa7.63□□□□□ -1.19
CAPN1-208ENST00000527323 COA5Q86WW8 74 aa7.62□□□□□ -1.19
CAPN1-208ENST00000527323 WWC2-AS2Q96NR7 200 aa7.61□□□□□ -1.19
CAPN1-208ENST00000527323 PANO1I0J062 215 aa7.6□□□□□ -1.19
CAPN1-208ENST00000527323 IGLV7-46A0A075B6I9 117 aa7.6□□□□□ -1.19
CAPN1-208ENST00000527323 IGHV6-1A0A0B4J1U7 121 aa7.59□□□□□ -1.19
CAPN1-208ENST00000527323 CDK2AP2O75956 126 aa7.59□□□□□ -1.19
CAPN1-208ENST00000527323 SPTSSBQ8NFR3 76 aa7.58□□□□□ -1.2
CAPN1-208ENST00000527323 A6NED7 52 aa7.58□□□□□ -1.2
CAPN1-208ENST00000527323 TP53AIP1Q9HCN2 124 aa7.58□□□□□ -1.2
CAPN1-208ENST00000527323 C8orf17Q9NRJ1 99 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms