RNA–Protein interactions for RNA: ENST00000527125.1

SCN3B-203, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

TSL 3

Gene SCN3B, Length 3,289 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-203ENST00000527125 ASB16-AS1Q495Z4 193 aa5.81□□□□□ -1.48
SCN3B-203ENST00000527125 HIVEP2P31629 2446 aa5.81□□□□□ -1.48
SCN3B-203ENST00000527125 SPRR1BP22528 89 aa5.81□□□□□ -1.48
SCN3B-203ENST00000527125 TENM2Q9NT68 2774 aa5.81□□□□□ -1.48
SCN3B-203ENST00000527125 PRR4Q16378 134 aa5.8□□□□□ -1.48
SCN3B-203ENST00000527125 Q5VV11 94 aa5.8□□□□□ -1.48
SCN3B-203ENST00000527125 SETD2Q9BYW2 2564 aaPredicted RBP5.8□□□□□ -1.48
SCN3B-203ENST00000527125 H3BPC8 53 aa5.79□□□□□ -1.48
SCN3B-203ENST00000527125 TENM3Q9P273 2699 aa5.79□□□□□ -1.48
SCN3B-203ENST00000527125 NDUFB1O75438 58 aa5.79□□□□□ -1.48
SCN3B-203ENST00000527125 CNBPP62633 177 aaKnown RBP5.79□□□□□ -1.48
SCN3B-203ENST00000527125 LINC00472Q9H8W2 130 aa5.79□□□□□ -1.48
SCN3B-203ENST00000527125 REG3GQ6UW15 175 aa5.79□□□□□ -1.48
SCN3B-203ENST00000527125 A0A0A0MQY5 61 aa5.78□□□□□ -1.48
SCN3B-203ENST00000527125 ACANP16112 2415 aa5.78□□□□□ -1.48
SCN3B-203ENST00000527125 DNAH7Q8WXX0 4024 aa5.78□□□□□ -1.48
SCN3B-203ENST00000527125 PLAC8Q9NZF1 115 aa5.77□□□□□ -1.49
SCN3B-203ENST00000527125 A0A0G2JQZ4 141 aa5.77□□□□□ -1.49
SCN3B-203ENST00000527125 A0A1W2PNN7 141 aa5.77□□□□□ -1.49
SCN3B-203ENST00000527125 Q8N9P0 234 aaPredicted RBP5.77□□□□□ -1.49
SCN3B-203ENST00000527125 H0Y9J4 135 aa5.76□□□□□ -1.49
SCN3B-203ENST00000527125 FASNP49327 2511 aaKnown RBP5.76□□□□□ -1.49
SCN3B-203ENST00000527125 NSD1Q96L73 2696 aaPredicted RBP5.75□□□□□ -1.49
SCN3B-203ENST00000527125 KRTAP11-1Q8IUC1 163 aa5.75□□□□□ -1.49
SCN3B-203ENST00000527125 MTORP42345 2549 aa5.75□□□□□ -1.49
SCN3B-203ENST00000527125 B9D2Q9BPU9 175 aa5.75□□□□□ -1.49
SCN3B-203ENST00000527125 LOC101927531A0A1B0GV80 90 aa5.74□□□□□ -1.49
SCN3B-203ENST00000527125 DEFB131BA0A096LNP1 70 aa5.74□□□□□ -1.49
SCN3B-203ENST00000527125 UNC79Q9P2D8 2635 aa5.74□□□□□ -1.49
SCN3B-203ENST00000527125 DNAH8Q96JB1 4490 aa5.73□□□□□ -1.49
SCN3B-203ENST00000527125 A8MUN3 132 aa5.73□□□□□ -1.49
SCN3B-203ENST00000527125 Q96NJ1 140 aa5.73□□□□□ -1.49
SCN3B-203ENST00000527125 TEP1Q99973 2627 aaKnown RBP5.72□□□□□ -1.49
SCN3B-203ENST00000527125 A8MWP4 228 aa5.72□□□□□ -1.49
SCN3B-203ENST00000527125 INAFM1C9JVW0 142 aa5.72□□□□□ -1.49
SCN3B-203ENST00000527125 RPL37AP61513 92 aaKnown RBP5.72□□□□□ -1.49
SCN3B-203ENST00000527125 KRTAP13-1Q8IUC0 172 aa5.72□□□□□ -1.49
SCN3B-203ENST00000527125 FBN1P35555 2871 aaKnown RBP5.72□□□□□ -1.49
SCN3B-203ENST00000527125 MMP24-AS1A0A0U1RRL7 71 aa5.72□□□□□ -1.49
SCN3B-203ENST00000527125 C16orf90A8MZG2 172 aa5.72□□□□□ -1.49
SCN3B-203ENST00000527125 IGLV7-46A0A075B6I9 117 aa5.71□□□□□ -1.5
SCN3B-203ENST00000527125 A0A087WSZ3 146 aa5.71□□□□□ -1.5
SCN3B-203ENST00000527125 UBE2BP63146 152 aa5.71□□□□□ -1.5
SCN3B-203ENST00000527125 Q75L30 129 aa5.7□□□□□ -1.5
SCN3B-203ENST00000527125 A0A096LNI7 61 aa5.7□□□□□ -1.5
SCN3B-203ENST00000527125 DEFB116Q30KQ4 102 aa5.7□□□□□ -1.5
SCN3B-203ENST00000527125 HECTD4Q9Y4D8 3996 aa5.7□□□□□ -1.5
SCN3B-203ENST00000527125 H0Y9P7 68 aa5.7□□□□□ -1.5
SCN3B-203ENST00000527125 MP68P56378 58 aa5.69□□□□□ -1.5
SCN3B-203ENST00000527125 Q6ZR54 194 aa5.69□□□□□ -1.5
SCN3B-203ENST00000527125 WFDC13Q8IUB5 93 aa5.69□□□□□ -1.5
SCN3B-203ENST00000527125 LINC00208Q96KT6 92 aa5.69□□□□□ -1.5
SCN3B-203ENST00000527125 MDFIQ99750 246 aa5.69□□□□□ -1.5
SCN3B-203ENST00000527125 LIMD2Q9BT23 127 aa5.69□□□□□ -1.5
SCN3B-203ENST00000527125 CASC2Q6XLA1 102 aa5.68□□□□□ -1.5
SCN3B-203ENST00000527125 PRLHP81277 87 aa5.68□□□□□ -1.5
SCN3B-203ENST00000527125 LCA10Q71F78 164 aa5.68□□□□□ -1.5
SCN3B-203ENST00000527125 VPS13DQ5THJ4 4388 aa5.68□□□□□ -1.5
SCN3B-203ENST00000527125 PRKDCP78527 4128 aaKnown RBP5.67□□□□□ -1.5
SCN3B-203ENST00000527125 NOTCH2Q04721 2471 aa5.67□□□□□ -1.5
SCN3B-203ENST00000527125 KRTAP1-5Q9BYS1 174 aa5.67□□□□□ -1.5
SCN3B-203ENST00000527125 CHTF8P0CG12 524 aa5.67□□□□□ -1.5
SCN3B-203ENST00000527125 KTN1-AS1Q86SY8 53 aa5.66□□□□□ -1.5
SCN3B-203ENST00000527125 C8orf87E5RJ46 101 aa5.66□□□□□ -1.5
SCN3B-203ENST00000527125 CHKB-CPT1BH3BT56 60 aa5.65□□□□□ -1.5
SCN3B-203ENST00000527125 PLECQ15149 4684 aaKnown RBP5.65□□□□□ -1.5
SCN3B-203ENST00000527125 FRAS1Q86XX4 4008 aa5.65□□□□□ -1.5
SCN3B-203ENST00000527125 A6NN06 94 aa5.65□□□□□ -1.51
SCN3B-203ENST00000527125 DNAH17Q9UFH2 4485 aa5.65□□□□□ -1.51
SCN3B-203ENST00000527125 SRRM2Q9UQ35 2752 aaKnown RBP5.64□□□□□ -1.51
SCN3B-203ENST00000527125 COA5Q86WW8 74 aa5.63□□□□□ -1.51
SCN3B-203ENST00000527125 LINC01558Q9Y6Z2 57 aa5.63□□□□□ -1.51
SCN3B-203ENST00000527125 UBE2AP49459 152 aa5.63□□□□□ -1.51
SCN3B-203ENST00000527125 KRTAP13-3Q3SY46 172 aa5.63□□□□□ -1.51
SCN3B-203ENST00000527125 LINC00483Q53H64 154 aa5.62□□□□□ -1.51
SCN3B-203ENST00000527125 PHF5AQ7RTV0 110 aaKnown RBP5.62□□□□□ -1.51
SCN3B-203ENST00000527125 ATP11AUNQ6ZP68 121 aa5.61□□□□□ -1.51
SCN3B-203ENST00000527125 MAST4O15021 2626 aa5.6□□□□□ -1.51
SCN3B-203ENST00000527125 HECTD1Q9ULT8 2610 aa5.6□□□□□ -1.51
SCN3B-203ENST00000527125 DNAH2Q9P225 4427 aa5.59□□□□□ -1.51
SCN3B-203ENST00000527125 MOBPQ13875 183 aa5.59□□□□□ -1.51
SCN3B-203ENST00000527125 PRAC1Q96KF2 57 aa5.59□□□□□ -1.51
SCN3B-203ENST00000527125 TP53AIP1Q9HCN2 124 aa5.59□□□□□ -1.51
SCN3B-203ENST00000527125 ATRQ13535 2644 aa5.59□□□□□ -1.51
SCN3B-203ENST00000527125 CDC42SE1Q9NRR8 79 aa5.59□□□□□ -1.52
SCN3B-203ENST00000527125 PRR26Q8N8Z3 221 aa5.58□□□□□ -1.52
SCN3B-203ENST00000527125 PRR15LQ9BU68 103 aa5.58□□□□□ -1.52
SCN3B-203ENST00000527125 IGKV2-24A0A0C4DH68 120 aa5.57□□□□□ -1.52
SCN3B-203ENST00000527125 F8P00451 2351 aa5.57□□□□□ -1.52
SCN3B-203ENST00000527125 COL7A1Q02388 2944 aa5.57□□□□□ -1.52
SCN3B-203ENST00000527125 A6NED7 52 aa5.57□□□□□ -1.52
SCN3B-203ENST00000527125 C8orf17Q9NRJ1 99 aa5.56□□□□□ -1.52
SCN3B-203ENST00000527125 PANO1I0J062 215 aa5.56□□□□□ -1.52
SCN3B-203ENST00000527125 HRES1P13985 223 aa5.56□□□□□ -1.52
SCN3B-203ENST00000527125 DNAH6Q9C0G6 4158 aa5.56□□□□□ -1.52
SCN3B-203ENST00000527125 FLNBO75369 2602 aaKnown RBP5.56□□□□□ -1.52
SCN3B-203ENST00000527125 Q6ZRN7 208 aaPredicted RBP5.55□□□□□ -1.52
SCN3B-203ENST00000527125 KRTAP24-1Q3LI83 254 aa5.53□□□□□ -1.52
SCN3B-203ENST00000527125 A0A1B0GVX0 72 aa5.52□□□□□ -1.53
SCN3B-203ENST00000527125 WWC2-AS2Q96NR7 200 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms